RNA–Protein interactions for RNA: ENST00000471188.5

VPS50-210, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-210ENST00000471188 HLA-DRB4X5D2U9 266 aa3.36□□□□□ -1.87
VPS50-210ENST00000471188 SPTBN5Q9NRC6 3674 aaKnown RBP3.36□□□□□ -1.87
VPS50-210ENST00000471188 PTPRBP23467 1997 aa3.36□□□□□ -1.87
VPS50-210ENST00000471188 LRP4O75096 1905 aa3.36□□□□□ -1.87
VPS50-210ENST00000471188 LOC107984640A0A0U1RRK4 108 aa3.36□□□□□ -1.87
VPS50-210ENST00000471188 MYMXA0A1B0GTQ4 84 aa3.36□□□□□ -1.87
VPS50-210ENST00000471188 C9JAW5 83 aa3.36□□□□□ -1.87
VPS50-210ENST00000471188 IGHV4-34P06331 123 aa3.36□□□□□ -1.87
VPS50-210ENST00000471188 TAL2Q16559 108 aa3.36□□□□□ -1.87
VPS50-210ENST00000471188 MRPL51Q4U2R6 128 aaKnown RBP3.36□□□□□ -1.87
VPS50-210ENST00000471188 PSMG4Q5JS54 123 aa3.36□□□□□ -1.87
VPS50-210ENST00000471188 FAM104BQ5XKR9 115 aa3.36□□□□□ -1.87
VPS50-210ENST00000471188 LYZL1Q6UWQ5 148 aa3.36□□□□□ -1.87
VPS50-210ENST00000471188 PATE2Q6UY27 113 aa3.36□□□□□ -1.87
VPS50-210ENST00000471188 Q86TA4 180 aa3.36□□□□□ -1.87
VPS50-210ENST00000471188 C15orf53Q8NAA6 179 aa3.36□□□□□ -1.87
VPS50-210ENST00000471188 TMEM14BQ9NUH8 114 aa3.36□□□□□ -1.87
VPS50-210ENST00000471188 CALYQ9NYX4 217 aa3.36□□□□□ -1.87
VPS50-210ENST00000471188 ONECUT1Q9UBC0 465 aa3.36□□□□□ -1.87
VPS50-210ENST00000471188 FOXA2Q9Y261 457 aaPredicted RBP3.36□□□□□ -1.87
VPS50-210ENST00000471188 CSDC2Q9Y534 153 aaKnown RBP3.36□□□□□ -1.87
VPS50-210ENST00000471188 MAP1BP46821 2468 aaKnown RBP3.36□□□□□ -1.87
VPS50-210ENST00000471188 PRRC2CQ9Y520 2896 aaKnown RBP3.36□□□□□ -1.87
VPS50-210ENST00000471188 WI2-2373I1.2A0A1W2PRP0 233 aa3.36□□□□□ -1.87
VPS50-210ENST00000471188 SCRG1O75711 98 aa3.36□□□□□ -1.87
VPS50-210ENST00000471188 PRCDQ00LT1 54 aa3.36□□□□□ -1.87
VPS50-210ENST00000471188 TUSC5Q8IXB3 177 aa3.36□□□□□ -1.87
VPS50-210ENST00000471188 MYOZ3Q8TDC0 251 aa3.36□□□□□ -1.87
VPS50-210ENST00000471188 TMEM158Q8WZ71 300 aa3.36□□□□□ -1.87
VPS50-210ENST00000471188 CHCHD5Q9BSY4 110 aa3.36□□□□□ -1.87
VPS50-210ENST00000471188 C12orf49Q9H741 205 aa3.36□□□□□ -1.87
VPS50-210ENST00000471188 PRUNE2Q8WUY3 3088 aa3.35□□□□□ -1.87
VPS50-210ENST00000471188 IGHV1OR21-1A0A087WYE8 117 aa3.35□□□□□ -1.87
VPS50-210ENST00000471188 DNPH1O43598 174 aa3.35□□□□□ -1.87
VPS50-210ENST00000471188 CEACAM4O75871 244 aa3.35□□□□□ -1.87
VPS50-210ENST00000471188 ATP5LO75964 103 aa3.35□□□□□ -1.87
VPS50-210ENST00000471188 TCL1BO95988 128 aa3.35□□□□□ -1.87
VPS50-210ENST00000471188 APELAP0DMC3 54 aa3.35□□□□□ -1.87
VPS50-210ENST00000471188 RNASE2P10153 161 aaKnown RBP3.35□□□□□ -1.87
VPS50-210ENST00000471188 KIR2DS2P43631 304 aa3.35□□□□□ -1.87
VPS50-210ENST00000471188 ZNF134P52741 427 aa3.35□□□□□ -1.87
VPS50-210ENST00000471188 HES1Q14469 280 aa3.35□□□□□ -1.87
VPS50-210ENST00000471188 OR10J6PQ8NGY7 276 aa3.35□□□□□ -1.87
VPS50-210ENST00000471188 ZNF714Q96N38 554 aa3.35□□□□□ -1.87
VPS50-210ENST00000471188 KLK15Q9H2R5 256 aa3.35□□□□□ -1.87
VPS50-210ENST00000471188 OBP2AQ9NY56 170 aa3.35□□□□□ -1.87
VPS50-210ENST00000471188 TRAV8-4A0A0B4J246 113 aa3.35□□□□□ -1.87
VPS50-210ENST00000471188 B9A039 149 aa3.35□□□□□ -1.87
VPS50-210ENST00000471188 SLC25A20O43772 301 aa3.35□□□□□ -1.87
VPS50-210ENST00000471188 EIF4EBP3O60516 100 aaPredicted RBP3.35□□□□□ -1.87
VPS50-210ENST00000471188 LINC00694P0DN24 101 aa3.35□□□□□ -1.87
VPS50-210ENST00000471188 C10orf126Q8N4M7 172 aa3.35□□□□□ -1.87
VPS50-210ENST00000471188 OR11H6Q8NGC7 330 aa3.35□□□□□ -1.87
VPS50-210ENST00000471188 NTN5Q8WTR8 489 aaPredicted RBP3.35□□□□□ -1.87
VPS50-210ENST00000471188 RNF138Q8WVD3 245 aa3.35□□□□□ -1.87
VPS50-210ENST00000471188 VKORC1Q9BQB6 163 aa3.35□□□□□ -1.87
VPS50-210ENST00000471188 TMEM126AQ9H061 195 aa3.35□□□□□ -1.87
VPS50-210ENST00000471188 CEP250Q9BV73 2442 aa3.35□□□□□ -1.87
VPS50-210ENST00000471188 TRBV7-3A0A075B6L6 115 aa3.34□□□□□ -1.87
VPS50-210ENST00000471188 WISP2O76076 250 aa3.34□□□□□ -1.87
VPS50-210ENST00000471188 SAA2P0DJI9 122 aaPredicted RBP3.34□□□□□ -1.87
VPS50-210ENST00000471188 RPL7P18124 248 aaKnown RBP3.34□□□□□ -1.87
VPS50-210ENST00000471188 LYZP61626 148 aa3.34□□□□□ -1.87
VPS50-210ENST00000471188 CFHR1Q03591 330 aa3.34□□□□□ -1.87
VPS50-210ENST00000471188 C2orf83Q53S99 150 aa3.34□□□□□ -1.87
VPS50-210ENST00000471188 RPS19BP1Q86WX3 136 aaKnown RBP3.34□□□□□ -1.87
VPS50-210ENST00000471188 CEP192Q8TEP8 1941 aa3.34□□□□□ -1.87
VPS50-210ENST00000471188 TRAV2A0A0B4J234 112 aa3.34□□□□□ -1.87
VPS50-210ENST00000471188 SMIM9A6NGZ8 99 aa3.34□□□□□ -1.87
VPS50-210ENST00000471188 ZNF815PA8K554 130 aa3.34□□□□□ -1.87
VPS50-210ENST00000471188 UPK2O00526 184 aa3.34□□□□□ -1.87
VPS50-210ENST00000471188 IGKV1-16P04430 117 aa3.34□□□□□ -1.87
VPS50-210ENST00000471188 THBDP07204 575 aa3.34□□□□□ -1.87
VPS50-210ENST00000471188 RFPL3SP0C7P2 107 aa3.34□□□□□ -1.87
VPS50-210ENST00000471188 ASIPP42127 132 aa3.34□□□□□ -1.87
VPS50-210ENST00000471188 Q1RN00 199 aa3.34□□□□□ -1.87
VPS50-210ENST00000471188 C10orf55Q5SWW7 151 aa3.34□□□□□ -1.87
VPS50-210ENST00000471188 C9orf153Q5TBE3 101 aa3.34□□□□□ -1.87
VPS50-210ENST00000471188 HCP5Q6MZN7 132 aa3.34□□□□□ -1.87
VPS50-210ENST00000471188 Q6ZS92 163 aa3.34□□□□□ -1.87
VPS50-210ENST00000471188 GGNQ86UU5 652 aa3.34□□□□□ -1.87
VPS50-210ENST00000471188 NRGNQ92686 78 aa3.34□□□□□ -1.87
VPS50-210ENST00000471188 SPANXA1Q9NS26 97 aa3.34□□□□□ -1.87
VPS50-210ENST00000471188 BEX4Q9NWD9 120 aaPredicted RBP3.34□□□□□ -1.87
VPS50-210ENST00000471188 CADP27708 2225 aa3.34□□□□□ -1.87
VPS50-210ENST00000471188 RP1L1Q8IWN7 2480 aaPredicted RBP3.34□□□□□ -1.87
VPS50-210ENST00000471188 WNK2Q9Y3S1 2297 aa3.34□□□□□ -1.88
VPS50-210ENST00000471188 IGHV3OR15-7A0A075B7D8 119 aa3.34□□□□□ -1.88
VPS50-210ENST00000471188 A4D1N5 150 aa3.34□□□□□ -1.88
VPS50-210ENST00000471188 SHISA9B4DS77 424 aa3.34□□□□□ -1.88
VPS50-210ENST00000471188 C15orf65H3BRN8 121 aa3.34□□□□□ -1.88
VPS50-210ENST00000471188 GATA1P15976 413 aaPredicted RBP3.34□□□□□ -1.88
VPS50-210ENST00000471188 LTBRP36941 435 aa3.34□□□□□ -1.88
VPS50-210ENST00000471188 MYCNOSP40205 109 aa3.34□□□□□ -1.88
VPS50-210ENST00000471188 SUB1P53999 127 aaKnown RBP eCLIP3.34□□□□□ -1.88
VPS50-210ENST00000471188 LOXL3P58215 753 aa3.34□□□□□ -1.88
VPS50-210ENST00000471188 ZNF56Q15929 161 aa3.34□□□□□ -1.88
VPS50-210ENST00000471188 UTF1Q5T230 341 aa3.34□□□□□ -1.88
VPS50-210ENST00000471188 TMEM78Q5T7P6 136 aa3.34□□□□□ -1.88
VPS50-210ENST00000471188 MDP1Q86V88 176 aa3.34□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms