RNA–Protein interactions for RNA: ENST00000466489.1

PMF1-204, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-204ENST00000466489 SHISA2Q6UWI4 295 aa7.84□□□□□ -1.15
PMF1-204ENST00000466489 LINC00305Q7Z4B0 112 aa7.84□□□□□ -1.15
PMF1-204ENST00000466489 ZNF329Q86UD4 541 aa7.84□□□□□ -1.15
PMF1-204ENST00000466489 PPP1R27Q86WC6 154 aa7.84□□□□□ -1.15
PMF1-204ENST00000466489 OR4X2Q8NGF9 303 aa7.84□□□□□ -1.15
PMF1-204ENST00000466489 WFDC12Q8WWY7 111 aa7.84□□□□□ -1.15
PMF1-204ENST00000466489 FAM167A-AS1Q96KT0 104 aa7.84□□□□□ -1.15
PMF1-204ENST00000466489 TXN2Q99757 166 aa7.84□□□□□ -1.15
PMF1-204ENST00000466489 ZNF747Q9BV97 191 aa7.84□□□□□ -1.15
PMF1-204ENST00000466489 FBXL15Q9H469 300 aa7.84□□□□□ -1.15
PMF1-204ENST00000466489 GNB4Q9HAV0 340 aa7.84□□□□□ -1.15
PMF1-204ENST00000466489 ST20Q9HBF5 79 aa7.84□□□□□ -1.15
PMF1-204ENST00000466489 TRAV9-2A0A087WT02 112 aa7.83□□□□□ -1.16
PMF1-204ENST00000466489 A0A1B0GV90 55 aa7.83□□□□□ -1.16
PMF1-204ENST00000466489 A0A1W2PS18 150 aa7.83□□□□□ -1.16
PMF1-204ENST00000466489 SH2D7A6NKC9 451 aaPredicted RBP7.83□□□□□ -1.16
PMF1-204ENST00000466489 SLC17A3O00476 420 aa7.83□□□□□ -1.16
PMF1-204ENST00000466489 CRXO43186 299 aaPredicted RBP7.83□□□□□ -1.16
PMF1-204ENST00000466489 CNTFRP26992 372 aa7.83□□□□□ -1.16
PMF1-204ENST00000466489 PROK1P58294 105 aa7.83□□□□□ -1.16
PMF1-204ENST00000466489 LINC00205P59089 165 aa7.83□□□□□ -1.16
PMF1-204ENST00000466489 RPS20P60866 119 aaKnown RBP7.83□□□□□ -1.16
PMF1-204ENST00000466489 KRTDAPP60985 99 aa7.83□□□□□ -1.16
PMF1-204ENST00000466489 FBLN7Q53RD9 439 aa7.83□□□□□ -1.16
PMF1-204ENST00000466489 Q6ZWC4 215 aa7.83□□□□□ -1.16
PMF1-204ENST00000466489 BPIFA4PQ86YQ2 179 aa7.83□□□□□ -1.16
PMF1-204ENST00000466489 OR4F17Q8NGA8 305 aa7.83□□□□□ -1.16
PMF1-204ENST00000466489 VN1R17PQ8TDU5 208 aa7.83□□□□□ -1.16
PMF1-204ENST00000466489 NPIPB3Q92617 1050 aa7.83□□□□□ -1.16
PMF1-204ENST00000466489 FXYD5Q96DB9 178 aa7.83□□□□□ -1.16
PMF1-204ENST00000466489 SLC25A2Q9BXI2 301 aa7.83□□□□□ -1.16
PMF1-204ENST00000466489 TMEM191AQ9H0A3 160 aa7.83□□□□□ -1.16
PMF1-204ENST00000466489 MS4A6AQ9H2W1 248 aa7.83□□□□□ -1.16
PMF1-204ENST00000466489 HIGD1AQ9Y241 93 aa7.83□□□□□ -1.16
PMF1-204ENST00000466489 SIGLEC9Q9Y336 463 aa7.83□□□□□ -1.16
PMF1-204ENST00000466489 TET2Q6N021 2002 aaPredicted RBP7.83□□□□□ -1.16
PMF1-204ENST00000466489 PLXNB1O43157 2135 aa7.82□□□□□ -1.16
PMF1-204ENST00000466489 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.82□□□□□ -1.16
PMF1-204ENST00000466489 LTAP01374 205 aa7.82□□□□□ -1.16
PMF1-204ENST00000466489 SLC25A5P05141 298 aaKnown RBP7.82□□□□□ -1.16
PMF1-204ENST00000466489 CT45A10P0DMU9 189 aa7.82□□□□□ -1.16
PMF1-204ENST00000466489 SRIP30626 198 aa7.82□□□□□ -1.16
PMF1-204ENST00000466489 MYCNOSP40205 109 aa7.82□□□□□ -1.16
PMF1-204ENST00000466489 CSN1S1P47710 185 aa7.82□□□□□ -1.16
PMF1-204ENST00000466489 PSG9Q00887 426 aa7.82□□□□□ -1.16
PMF1-204ENST00000466489 SAPCD1Q5SSQ6 148 aa7.82□□□□□ -1.16
PMF1-204ENST00000466489 ZNF562Q6V9R5 426 aa7.82□□□□□ -1.16
PMF1-204ENST00000466489 NUDT10Q8NFP7 164 aa7.82□□□□□ -1.16
PMF1-204ENST00000466489 ORAOV1Q8WV07 137 aa7.82□□□□□ -1.16
PMF1-204ENST00000466489 ARPC1AQ92747 370 aa7.82□□□□□ -1.16
PMF1-204ENST00000466489 NUDT11Q96G61 164 aa7.82□□□□□ -1.16
PMF1-204ENST00000466489 RITA1Q96K30 269 aa7.82□□□□□ -1.16
PMF1-204ENST00000466489 TMEM70Q9BUB7 260 aa7.82□□□□□ -1.16
PMF1-204ENST00000466489 MAP1LC3CQ9BXW4 147 aa7.82□□□□□ -1.16
PMF1-204ENST00000466489 AURKAIP1Q9NWT8 199 aaPredicted RBP7.82□□□□□ -1.16
PMF1-204ENST00000466489 ZNF580Q9UK33 172 aa7.82□□□□□ -1.16
PMF1-204ENST00000466489 GOLT1BQ9Y3E0 138 aa7.82□□□□□ -1.16
PMF1-204ENST00000466489 STAB1Q9NY15 2570 aa7.82□□□□□ -1.16
PMF1-204ENST00000466489 FBN1P35555 2871 aaKnown RBP7.81□□□□□ -1.16
PMF1-204ENST00000466489 IGKV1OR2-108A0A075B7D4 117 aa7.81□□□□□ -1.16
PMF1-204ENST00000466489 PGPA6NDG6 321 aa7.81□□□□□ -1.16
PMF1-204ENST00000466489 SRRM4A7MD48 611 aaKnown RBP7.81□□□□□ -1.16
PMF1-204ENST00000466489 M0R2Z0 102 aa7.81□□□□□ -1.16
PMF1-204ENST00000466489 BMPR1BO00238 502 aa7.81□□□□□ -1.16
PMF1-204ENST00000466489 CHEK1O14757 476 aa7.81□□□□□ -1.16
PMF1-204ENST00000466489 IGLV2-8P01709 118 aa7.81□□□□□ -1.16
PMF1-204ENST00000466489 IGF1P05019 195 aa7.81□□□□□ -1.16
PMF1-204ENST00000466489 HNRNPA3P51991 378 aaKnown RBP7.81□□□□□ -1.16
PMF1-204ENST00000466489 FXYD3Q14802 87 aa7.81□□□□□ -1.16
PMF1-204ENST00000466489 TNXAQ16473 311 aa7.81□□□□□ -1.16
PMF1-204ENST00000466489 TMEM95Q3KNT9 176 aa7.81□□□□□ -1.16
PMF1-204ENST00000466489 KHDC1LQ5JSQ8 128 aa7.81□□□□□ -1.16
PMF1-204ENST00000466489 SPATA31B1PQ5VZV4 182 aa7.81□□□□□ -1.16
PMF1-204ENST00000466489 Q6ZS46 218 aa7.81□□□□□ -1.16
PMF1-204ENST00000466489 NUP35Q8NFH5 326 aa7.81□□□□□ -1.16
PMF1-204ENST00000466489 DPF1Q92782 380 aa7.81□□□□□ -1.16
PMF1-204ENST00000466489 MLST8Q9BVC4 326 aa7.81□□□□□ -1.16
PMF1-204ENST00000466489 SNHG12Q9BXW3 62 aa7.81□□□□□ -1.16
PMF1-204ENST00000466489 WNT10AQ9GZT5 417 aa7.81□□□□□ -1.16
PMF1-204ENST00000466489 AAMDCQ9H7C9 122 aa7.81□□□□□ -1.16
PMF1-204ENST00000466489 CLEC5AQ9NY25 188 aa7.81□□□□□ -1.16
PMF1-204ENST00000466489 F11RQ9Y624 299 aaKnown RBP7.81□□□□□ -1.16
PMF1-204ENST00000466489 TNCP24821 2201 aa7.8□□□□□ -1.16
PMF1-204ENST00000466489 IGHV7-81A0A0B4J1V7 117 aa7.8□□□□□ -1.16
PMF1-204ENST00000466489 TRAV41A0A0B4J266 112 aa7.8□□□□□ -1.16
PMF1-204ENST00000466489 GRIFINA4D1Z8 144 aa7.8□□□□□ -1.16
PMF1-204ENST00000466489 PGPEP1LA6NFU8 196 aa7.8□□□□□ -1.16
PMF1-204ENST00000466489 HIGD1CA8MV81 97 aa7.8□□□□□ -1.16
PMF1-204ENST00000466489 M0QZ24 198 aa7.8□□□□□ -1.16
PMF1-204ENST00000466489 ATP6V0E1O15342 81 aa7.8□□□□□ -1.16
PMF1-204ENST00000466489 IGLV2-23P01705 113 aa7.8□□□□□ -1.16
PMF1-204ENST00000466489 TCRAP04437 139 aa7.8□□□□□ -1.16
PMF1-204ENST00000466489 WT1-ASQ06250 92 aa7.8□□□□□ -1.16
PMF1-204ENST00000466489 ECSCRQ19T08 205 aa7.8□□□□□ -1.16
PMF1-204ENST00000466489 SPATA45Q537H7 98 aa7.8□□□□□ -1.16
PMF1-204ENST00000466489 SPATA12Q7Z6I5 190 aa7.8□□□□□ -1.16
PMF1-204ENST00000466489 ZNF503Q96F45 646 aa7.8□□□□□ -1.16
PMF1-204ENST00000466489 ALKBH7Q9BT30 221 aaPredicted RBP7.8□□□□□ -1.16
PMF1-204ENST00000466489 RNASE7Q9H1E1 156 aaKnown RBP7.8□□□□□ -1.16
PMF1-204ENST00000466489 DEFA4P12838 97 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms