RNA–Protein interactions for RNA: ENST00000466373.1

UFD1-206, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 3,059 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-206ENST00000466373 SIRPDQ9H106 197 aa8.12□□□□□ -1.11
UFD1-206ENST00000466373 G3V318 75 aa8.12□□□□□ -1.11
UFD1-206ENST00000466373 M0QZK8 103 aa8.12□□□□□ -1.11
UFD1-206ENST00000466373 IGLL1P15814 213 aa8.12□□□□□ -1.11
UFD1-206ENST00000466373 SAA4P35542 130 aa8.12□□□□□ -1.11
UFD1-206ENST00000466373 UNQ5815/PRO19632Q6UWF5 114 aa8.12□□□□□ -1.11
UFD1-206ENST00000466373 IGHV3-49A0A0A0MS15 119 aa8.11□□□□□ -1.11
UFD1-206ENST00000466373 FAM106CPP0CH98 169 aa8.11□□□□□ -1.11
UFD1-206ENST00000466373 RELQ04864 619 aaPredicted RBP8.11□□□□□ -1.11
UFD1-206ENST00000466373 C16orf54Q6UWD8 224 aa8.11□□□□□ -1.11
UFD1-206ENST00000466373 VGLL1Q99990 258 aa8.11□□□□□ -1.11
UFD1-206ENST00000466373 PMCHL2Q9BQD1 86 aa8.11□□□□□ -1.11
UFD1-206ENST00000466373 NDFIP1Q9BT67 221 aa8.11□□□□□ -1.11
UFD1-206ENST00000466373 TMEM213A2RRL7 107 aa8.11□□□□□ -1.11
UFD1-206ENST00000466373 C19orf84I3L1E1 186 aa8.11□□□□□ -1.11
UFD1-206ENST00000466373 ATP6V0E1O15342 81 aa8.11□□□□□ -1.11
UFD1-206ENST00000466373 CLEC3BP05452 202 aa8.11□□□□□ -1.11
UFD1-206ENST00000466373 RIGQ13278 110 aa8.11□□□□□ -1.11
UFD1-206ENST00000466373 MINOS1Q5TGZ0 78 aa8.11□□□□□ -1.11
UFD1-206ENST00000466373 C1orf122Q6ZSJ8 110 aa8.11□□□□□ -1.11
UFD1-206ENST00000466373 RABAC1Q9UI14 185 aa8.11□□□□□ -1.11
UFD1-206ENST00000466373 SMAD5-AS1Q9Y6J3 95 aa8.11□□□□□ -1.11
UFD1-206ENST00000466373 MINOS1-NBL1R4GNA1 71 aa8.11□□□□□ -1.11
UFD1-206ENST00000466373 CENPEQ02224 2701 aa8.11□□□□□ -1.11
UFD1-206ENST00000466373 TRAV9-2A0A087WT02 112 aa8.11□□□□□ -1.11
UFD1-206ENST00000466373 LOC389332A0A1B0GUA5 103 aa8.11□□□□□ -1.11
UFD1-206ENST00000466373 OR4C46A6NHA9 309 aa8.11□□□□□ -1.11
UFD1-206ENST00000466373 RPL7P18124 248 aaKnown RBP8.11□□□□□ -1.11
UFD1-206ENST00000466373 LYZL1Q6UWQ5 148 aa8.11□□□□□ -1.11
UFD1-206ENST00000466373 KLHDC1Q8N7A1 406 aa8.11□□□□□ -1.11
UFD1-206ENST00000466373 ABCA2Q9BZC7 2435 aa8.1□□□□□ -1.11
UFD1-206ENST00000466373 SH2D1AO60880 128 aa8.1□□□□□ -1.11
UFD1-206ENST00000466373 RHOGP84095 191 aa8.1□□□□□ -1.11
UFD1-206ENST00000466373 PDE6HQ13956 83 aa8.1□□□□□ -1.11
UFD1-206ENST00000466373 TMEM219Q86XT9 240 aa8.1□□□□□ -1.11
UFD1-206ENST00000466373 STPG4Q8N801 248 aa8.1□□□□□ -1.11
UFD1-206ENST00000466373 CHCHD1Q96BP2 118 aaKnown RBP8.1□□□□□ -1.11
UFD1-206ENST00000466373 LINC00527Q9UJ94 153 aa8.1□□□□□ -1.11
UFD1-206ENST00000466373 IGHV2-70DA0A0C4DH43 119 aa8.1□□□□□ -1.11
UFD1-206ENST00000466373 TRBV6-1A0A0K0K1D8 114 aa8.1□□□□□ -1.11
UFD1-206ENST00000466373 hDV102S1A0JD36 115 aa8.1□□□□□ -1.11
UFD1-206ENST00000466373 TMEM189A5PLL7 270 aa8.1□□□□□ -1.11
UFD1-206ENST00000466373 SYS1-DBNDD2H3BUS1 97 aa8.1□□□□□ -1.11
UFD1-206ENST00000466373 ZNF207O43670 478 aaKnown RBP8.1□□□□□ -1.11
UFD1-206ENST00000466373 HINT1P49773 126 aaPredicted RBP8.1□□□□□ -1.11
UFD1-206ENST00000466373 EBI3Q14213 229 aa8.1□□□□□ -1.11
UFD1-206ENST00000466373 S100A7AQ86SG5 101 aa8.1□□□□□ -1.11
UFD1-206ENST00000466373 PIP4P2Q8N4L2 257 aa8.1□□□□□ -1.11
UFD1-206ENST00000466373 RNF182Q8N6D2 247 aa8.1□□□□□ -1.11
UFD1-206ENST00000466373 AJUBAQ96IF1 538 aa8.1□□□□□ -1.11
UFD1-206ENST00000466373 TMEM208Q9BTX3 173 aa8.1□□□□□ -1.11
UFD1-206ENST00000466373 TSPOP30536 169 aa8.09□□□□□ -1.11
UFD1-206ENST00000466373 ZNF80P51504 273 aaPredicted RBP8.09□□□□□ -1.11
UFD1-206ENST00000466373 FAM106AQ4KMX7 169 aa8.09□□□□□ -1.11
UFD1-206ENST00000466373 CYB5R2Q6BCY4 276 aa8.09□□□□□ -1.11
UFD1-206ENST00000466373 LAMTOR2Q9Y2Q5 125 aa8.09□□□□□ -1.11
UFD1-206ENST00000466373 OOSP1A8MZH6 123 aa8.09□□□□□ -1.11
UFD1-206ENST00000466373 EFNA4P52798 201 aa8.09□□□□□ -1.11
UFD1-206ENST00000466373 FXYD7P58549 80 aa8.09□□□□□ -1.11
UFD1-206ENST00000466373 PSG9Q00887 426 aa8.09□□□□□ -1.11
UFD1-206ENST00000466373 ERCC8Q13216 396 aa8.09□□□□□ -1.11
UFD1-206ENST00000466373 CLEC19AQ6UXS0 136 aa8.09□□□□□ -1.11
UFD1-206ENST00000466373 Q6ZVH6 145 aa8.09□□□□□ -1.11
UFD1-206ENST00000466373 AMN1Q8IY45 258 aa8.09□□□□□ -1.11
UFD1-206ENST00000466373 ZNF48Q96MX3 618 aaPredicted RBP8.09□□□□□ -1.11
UFD1-206ENST00000466373 PRR25Q96S07 402 aa8.09□□□□□ -1.11
UFD1-206ENST00000466373 CSPG4Q6UVK1 2322 aa8.09□□□□□ -1.12
UFD1-206ENST00000466373 D6R8Y8 96 aa8.09□□□□□ -1.12
UFD1-206ENST00000466373 IGHG4P01861 327 aa8.09□□□□□ -1.12
UFD1-206ENST00000466373 UBE2E1P51965 193 aa8.09□□□□□ -1.12
UFD1-206ENST00000466373 FAM162BQ5T6X4 162 aa8.09□□□□□ -1.12
UFD1-206ENST00000466373 PRSS3P2Q8NHM4 247 aa8.09□□□□□ -1.12
UFD1-206ENST00000466373 PRAC2D3DTV9 90 aa8.08□□□□□ -1.12
UFD1-206ENST00000466373 LMO4P61968 165 aa8.08□□□□□ -1.12
UFD1-206ENST00000466373 AP5S1Q9NUS5 200 aa8.08□□□□□ -1.12
UFD1-206ENST00000466373 PIEZO1Q92508 2521 aa8.08□□□□□ -1.12
UFD1-206ENST00000466373 NPSP0C0P6 89 aa8.08□□□□□ -1.12
UFD1-206ENST00000466373 IFI27P40305 119 aaPredicted RBP8.08□□□□□ -1.12
UFD1-206ENST00000466373 COL5A1-AS1Q5SY13 56 aa8.08□□□□□ -1.12
UFD1-206ENST00000466373 MYO18BQ8IUG5 2567 aa8.07□□□□□ -1.12
UFD1-206ENST00000466373 SMKR1H3BMG3 65 aa8.07□□□□□ -1.12
UFD1-206ENST00000466373 GNLYP22749 145 aa8.07□□□□□ -1.12
UFD1-206ENST00000466373 LOXL1Q08397 574 aaPredicted RBP8.07□□□□□ -1.12
UFD1-206ENST00000466373 ZNF502Q8TBZ5 544 aa8.07□□□□□ -1.12
UFD1-206ENST00000466373 MAP1LC3CQ9BXW4 147 aa8.07□□□□□ -1.12
UFD1-206ENST00000466373 ORM1P02763 201 aa8.07□□□□□ -1.12
UFD1-206ENST00000466373 TWIST1Q15672 202 aa8.07□□□□□ -1.12
UFD1-206ENST00000466373 BRD3OSQ6XYD6 125 aa8.07□□□□□ -1.12
UFD1-206ENST00000466373 FA2HQ7L5A8 372 aa8.07□□□□□ -1.12
UFD1-206ENST00000466373 MRPL52Q86TS9 123 aaKnown RBP8.07□□□□□ -1.12
UFD1-206ENST00000466373 ITLN2Q8WWU7 325 aaPredicted RBP8.07□□□□□ -1.12
UFD1-206ENST00000466373 USP9XQ93008 2570 aaPredicted RBP8.07□□□□□ -1.12
UFD1-206ENST00000466373 SCGB2A1O75556 95 aa8.06□□□□□ -1.12
UFD1-206ENST00000466373 OR5AL1P0C617 328 aa8.06□□□□□ -1.12
UFD1-206ENST00000466373 PPIFP30405 207 aaKnown RBP8.06□□□□□ -1.12
UFD1-206ENST00000466373 FAM110DQ8TAY7 271 aaPredicted RBP8.06□□□□□ -1.12
UFD1-206ENST00000466373 CCDC140Q96MF4 163 aa8.06□□□□□ -1.12
UFD1-206ENST00000466373 CRXO43186 299 aaPredicted RBP8.06□□□□□ -1.12
UFD1-206ENST00000466373 ZNF124Q15973 351 aa8.06□□□□□ -1.12
UFD1-206ENST00000466373 SAPCD1Q5SSQ6 148 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms