RNA–Protein interactions for RNA: ENST00000465871.1

SSB-207, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 421 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-207ENST00000465871 PFDN1O60925 122 aa0.47□□□□□ -2.33
SSB-207ENST00000465871 CD14P08571 375 aa0.47□□□□□ -2.33
SSB-207ENST00000465871 MIR22HGQ0VDD5 57 aa0.47□□□□□ -2.33
SSB-207ENST00000465871 FOXI2Q6ZQN5 318 aa0.47□□□□□ -2.33
SSB-207ENST00000465871 PHF5AQ7RTV0 110 aaKnown RBP0.47□□□□□ -2.33
SSB-207ENST00000465871 STX12Q86Y82 276 aa0.47□□□□□ -2.33
SSB-207ENST00000465871 ISOC1Q96CN7 298 aa0.47□□□□□ -2.33
SSB-207ENST00000465871 OR4C12Q96R67 309 aa0.47□□□□□ -2.33
SSB-207ENST00000465871 CCDC32Q9BV29 185 aa0.47□□□□□ -2.33
SSB-207ENST00000465871 PCBD2Q9H0N5 130 aa0.47□□□□□ -2.33
SSB-207ENST00000465871 CST11Q9H112 138 aa0.47□□□□□ -2.33
SSB-207ENST00000465871 BOLA2Q9H3K6 86 aa0.47□□□□□ -2.33
SSB-207ENST00000465871 NUBP2Q9Y5Y2 271 aa0.47□□□□□ -2.33
SSB-207ENST00000465871 CD109Q6YHK3 1445 aa0.47□□□□□ -2.33
SSB-207ENST00000465871 ALPK3Q96L96 1907 aa0.46□□□□□ -2.34
SSB-207ENST00000465871 LAMA4Q16363 1823 aa0.46□□□□□ -2.34
SSB-207ENST00000465871 NUPR2A6NF83 97 aa0.46□□□□□ -2.34
SSB-207ENST00000465871 GABARAPH6UMI1 98 aa0.46□□□□□ -2.34
SSB-207ENST00000465871 FABP4P15090 132 aa0.46□□□□□ -2.34
SSB-207ENST00000465871 S100A11P31949 105 aa0.46□□□□□ -2.34
SSB-207ENST00000465871 SDC2P34741 201 aa0.46□□□□□ -2.34
SSB-207ENST00000465871 NDUFA6P56556 154 aa0.46□□□□□ -2.34
SSB-207ENST00000465871 FXYD4P59646 89 aa0.46□□□□□ -2.34
SSB-207ENST00000465871 MRPS36P82909 103 aaKnown RBP0.46□□□□□ -2.34
SSB-207ENST00000465871 NEDD8Q15843 81 aa0.46□□□□□ -2.34
SSB-207ENST00000465871 OCIAD2Q56VL3 154 aa0.46□□□□□ -2.34
SSB-207ENST00000465871 PRR15Q8IV56 129 aa0.46□□□□□ -2.34
SSB-207ENST00000465871 OR4B1Q8NGF8 309 aa0.46□□□□□ -2.34
SSB-207ENST00000465871 OR5H6Q8NGV6 325 aa0.46□□□□□ -2.34
SSB-207ENST00000465871 OR10AC1Q8NH08 325 aa0.46□□□□□ -2.34
SSB-207ENST00000465871 EFCAB11Q9BUY7 163 aa0.46□□□□□ -2.34
SSB-207ENST00000465871 IL20Q9NYY1 176 aa0.46□□□□□ -2.34
SSB-207ENST00000465871 HSPB8Q9UJY1 196 aa0.46□□□□□ -2.34
SSB-207ENST00000465871 BOKQ9UMX3 212 aaPredicted RBP0.46□□□□□ -2.34
SSB-207ENST00000465871 LAMTOR2Q9Y2Q5 125 aa0.46□□□□□ -2.34
SSB-207ENST00000465871 V9GYQ6 96 aa0.46□□□□□ -2.34
SSB-207ENST00000465871 PEAK1Q9H792 1746 aa0.46□□□□□ -2.34
SSB-207ENST00000465871 COL1A1P02452 1464 aaPredicted RBP0.46□□□□□ -2.34
SSB-207ENST00000465871 CAMSAP2Q08AD1 1489 aa0.46□□□□□ -2.34
SSB-207ENST00000465871 PTPRFP10586 1907 aa0.46□□□□□ -2.34
SSB-207ENST00000465871 TET1Q8NFU7 2136 aa0.46□□□□□ -2.34
SSB-207ENST00000465871 RFX7Q2KHR2 1363 aa0.45□□□□□ -2.34
SSB-207ENST00000465871 MYH2Q9UKX2 1941 aa0.45□□□□□ -2.34
SSB-207ENST00000465871 LOC107984156A0A0G2JMH3 177 aa0.45□□□□□ -2.34
SSB-207ENST00000465871 C3orf85A0A1B0GTC6 90 aa0.45□□□□□ -2.34
SSB-207ENST00000465871 TRDV1A0A1B0GX56 115 aa0.45□□□□□ -2.34
SSB-207ENST00000465871 FABP1P07148 127 aa0.45□□□□□ -2.34
SSB-207ENST00000465871 BCL2P10415 239 aa0.45□□□□□ -2.34
SSB-207ENST00000465871 S100A5P33763 92 aa0.45□□□□□ -2.34
SSB-207ENST00000465871 GLIPR1L1Q6UWM5 242 aa0.45□□□□□ -2.34
SSB-207ENST00000465871 LINC00575Q6W349 94 aa0.45□□□□□ -2.34
SSB-207ENST00000465871 Q86TA4 180 aa0.45□□□□□ -2.34
SSB-207ENST00000465871 ARL17AQ8IVW1 177 aa0.45□□□□□ -2.34
SSB-207ENST00000465871 TEX29Q8N6K0 151 aa0.45□□□□□ -2.34
SSB-207ENST00000465871 OR5AK2Q8NH90 309 aa0.45□□□□□ -2.34
SSB-207ENST00000465871 GRPEL2Q8TAA5 225 aa0.45□□□□□ -2.34
SSB-207ENST00000465871 MCEEQ96PE7 176 aa0.45□□□□□ -2.34
SSB-207ENST00000465871 LIMD2Q9BT23 127 aa0.45□□□□□ -2.34
SSB-207ENST00000465871 LRTM1Q9HBL6 345 aa0.45□□□□□ -2.34
SSB-207ENST00000465871 ATPIF1Q9UII2 106 aa0.45□□□□□ -2.34
SSB-207ENST00000465871 NUP210LQ5VU65 1888 aa0.45□□□□□ -2.34
SSB-207ENST00000465871 YTHDC2Q9H6S0 1430 aaKnown RBP0.45□□□□□ -2.34
SSB-207ENST00000465871 N4BP2Q86UW6 1770 aaPredicted RBP0.45□□□□□ -2.34
SSB-207ENST00000465871 RTL9Q8NET4 1388 aa0.45□□□□□ -2.34
SSB-207ENST00000465871 PLXNA4Q9HCM2 1894 aa0.44□□□□□ -2.34
SSB-207ENST00000465871 TRBV30A0A0K0K1B3 111 aa0.44□□□□□ -2.34
SSB-207ENST00000465871 A0A1B0GV72 72 aa0.44□□□□□ -2.34
SSB-207ENST00000465871 ZNF727A8MUV8 499 aa0.44□□□□□ -2.34
SSB-207ENST00000465871 E7EQ34 232 aa0.44□□□□□ -2.34
SSB-207ENST00000465871 H7BYZ3 331 aa0.44□□□□□ -2.34
SSB-207ENST00000465871 TRACP01848 142 aa0.44□□□□□ -2.34
SSB-207ENST00000465871 TPT1P13693 172 aaKnown RBP0.44□□□□□ -2.34
SSB-207ENST00000465871 CASC2Q6XLA1 102 aa0.44□□□□□ -2.34
SSB-207ENST00000465871 ZCCHC23Q6ZST2 131 aa0.44□□□□□ -2.34
SSB-207ENST00000465871 LINC00305Q7Z4B0 112 aa0.44□□□□□ -2.34
SSB-207ENST00000465871 CLEC2BQ92478 149 aa0.44□□□□□ -2.34
SSB-207ENST00000465871 PRELID3AQ96N28 172 aa0.44□□□□□ -2.34
SSB-207ENST00000465871 SELENOSQ9BQE4 189 aa0.44□□□□□ -2.34
SSB-207ENST00000465871 TAF9BQ9HBM6 251 aa0.44□□□□□ -2.34
SSB-207ENST00000465871 NIT2Q9NQR4 276 aa0.44□□□□□ -2.34
SSB-207ENST00000465871 TRAPPC2LQ9UL33 140 aa0.44□□□□□ -2.34
SSB-207ENST00000465871 TECPR2O15040 1411 aa0.44□□□□□ -2.34
SSB-207ENST00000465871 ROCK1Q13464 1354 aa0.44□□□□□ -2.34
SSB-207ENST00000465871 CITO14578 2027 aa0.43□□□□□ -2.34
SSB-207ENST00000465871 NCAPD3P42695 1498 aa0.43□□□□□ -2.34
SSB-207ENST00000465871 ZGRF1Q86YA3 2104 aa0.43□□□□□ -2.34
SSB-207ENST00000465871 MYH3P11055 1940 aa0.43□□□□□ -2.34
SSB-207ENST00000465871 A0A1W2PRE2 83 aa0.43□□□□□ -2.34
SSB-207ENST00000465871 IFNA21P01568 189 aa0.43□□□□□ -2.34
SSB-207ENST00000465871 IGHV3-33P01772 117 aa0.43□□□□□ -2.34
SSB-207ENST00000465871 MAXP61244 160 aa0.43□□□□□ -2.34
SSB-207ENST00000465871 TMEM78Q5T7P6 136 aa0.43□□□□□ -2.34
SSB-207ENST00000465871 HRCT1Q6UXD1 115 aa0.43□□□□□ -2.34
SSB-207ENST00000465871 Q6ZQY7 126 aa0.43□□□□□ -2.34
SSB-207ENST00000465871 LINC00299Q6ZSB3 139 aa0.43□□□□□ -2.34
SSB-207ENST00000465871 KRTAP19-3Q7Z4W3 81 aa0.43□□□□□ -2.34
SSB-207ENST00000465871 LINC00269Q8N2A0 174 aa0.43□□□□□ -2.34
SSB-207ENST00000465871 C5orf17Q8NAS9 161 aa0.43□□□□□ -2.34
SSB-207ENST00000465871 DIRC1Q969H9 104 aa0.43□□□□□ -2.34
SSB-207ENST00000465871 RMND5BQ96G75 393 aaPredicted RBP0.43□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 168.3 ms