RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 ZC2HC1AQ96GY0 325 aa12.7□□□□□ -0.38
SMC4-204ENST00000462787 ASXL3Q9C0F0 2248 aa12.7□□□□□ -0.38
SMC4-204ENST00000462787 IGKV3OR2-268A0A0C4DH90 116 aa12.7□□□□□ -0.38
SMC4-204ENST00000462787 GAGE12JA6NER3 117 aa12.7□□□□□ -0.38
SMC4-204ENST00000462787 GAGE7O76087 117 aa12.7□□□□□ -0.38
SMC4-204ENST00000462787 GAGE12FP0CL80 117 aa12.7□□□□□ -0.38
SMC4-204ENST00000462787 GAGE12GP0CL81 117 aa12.7□□□□□ -0.38
SMC4-204ENST00000462787 GAGE12IP0CL82 117 aa12.7□□□□□ -0.38
SMC4-204ENST00000462787 HLA-DRB4P13762 266 aa12.7□□□□□ -0.38
SMC4-204ENST00000462787 GAGE4Q13068 117 aa12.7□□□□□ -0.38
SMC4-204ENST00000462787 C5orf64Q2M2E5 130 aa12.7□□□□□ -0.38
SMC4-204ENST00000462787 HLA-DRB4X5D2U9 266 aa12.7□□□□□ -0.38
SMC4-204ENST00000462787 PRDM6Q9NQX0 595 aa12.69□□□□□ -0.38
SMC4-204ENST00000462787 OOSP1A8MZH6 123 aa12.69□□□□□ -0.38
SMC4-204ENST00000462787 G3V4G9 280 aa12.69□□□□□ -0.38
SMC4-204ENST00000462787 BUB1B-PAK6H3BSN5 160 aa12.69□□□□□ -0.38
SMC4-204ENST00000462787 C17orf58Q2M2W7 97 aa12.69□□□□□ -0.38
SMC4-204ENST00000462787 SHISA9B4DS77 424 aa12.69□□□□□ -0.38
SMC4-204ENST00000462787 MDS2Q8NDY4 140 aa12.69□□□□□ -0.38
SMC4-204ENST00000462787 TMEM141Q96I45 108 aa12.69□□□□□ -0.38
SMC4-204ENST00000462787 IGF2BP2-AS1Q96M15 143 aa12.69□□□□□ -0.38
SMC4-204ENST00000462787 SHANK1Q9Y566 2161 aa12.69□□□□□ -0.38
SMC4-204ENST00000462787 PCP2Q8IVA1 136 aa12.68□□□□□ -0.38
SMC4-204ENST00000462787 LINC01560Q8TB33 94 aa12.68□□□□□ -0.38
SMC4-204ENST00000462787 PRR25Q96S07 402 aa12.68□□□□□ -0.38
SMC4-204ENST00000462787 TOMM7Q9P0U1 55 aa12.68□□□□□ -0.38
SMC4-204ENST00000462787 PRADC1Q9BSG0 188 aa12.68□□□□□ -0.38
SMC4-204ENST00000462787 K7EM74 188 aa12.68□□□□□ -0.38
SMC4-204ENST00000462787 WT1-ASQ06250 92 aa12.68□□□□□ -0.38
SMC4-204ENST00000462787 OVOL2Q9BRP0 275 aa12.68□□□□□ -0.38
SMC4-204ENST00000462787 PRO1854Q9UHT4 67 aa12.68□□□□□ -0.38
SMC4-204ENST00000462787 EDA2RQ9HAV5 297 aa12.68□□□□□ -0.38
SMC4-204ENST00000462787 TRAV8-3A0A0A6YYJ7 113 aa12.67□□□□□ -0.38
SMC4-204ENST00000462787 KRTAP27-1Q3LI81 207 aa12.67□□□□□ -0.38
SMC4-204ENST00000462787 ASPHD1Q5U4P2 390 aa12.67□□□□□ -0.38
SMC4-204ENST00000462787 IGLL5B9A064 214 aa12.67□□□□□ -0.38
SMC4-204ENST00000462787 LINC00173Q6ZV60 143 aa12.67□□□□□ -0.38
SMC4-204ENST00000462787 PLXNB3Q9ULL4 1909 aa12.67□□□□□ -0.38
SMC4-204ENST00000462787 A0A087WX48 190 aa12.67□□□□□ -0.38
SMC4-204ENST00000462787 IGKV3D-20A0A0C4DH25 116 aa12.67□□□□□ -0.38
SMC4-204ENST00000462787 H3BRN7 92 aa12.67□□□□□ -0.38
SMC4-204ENST00000462787 ZNF134P52741 427 aa12.67□□□□□ -0.38
SMC4-204ENST00000462787 ANKRD39Q53RE8 183 aa12.67□□□□□ -0.38
SMC4-204ENST00000462787 IGFL4Q6B9Z1 124 aa12.67□□□□□ -0.38
SMC4-204ENST00000462787 ZNF474Q6S9Z5 364 aaPredicted RBP12.67□□□□□ -0.38
SMC4-204ENST00000462787 FOXI2Q6ZQN5 318 aa12.67□□□□□ -0.38
SMC4-204ENST00000462787 TIMM21Q9BVV7 248 aa12.67□□□□□ -0.38
SMC4-204ENST00000462787 ZNF876PQ49A33 203 aa12.66□□□□□ -0.38
SMC4-204ENST00000462787 ANAPC1Q9H1A4 1944 aa12.66□□□□□ -0.38
SMC4-204ENST00000462787 SLC25A20O43772 301 aa12.66□□□□□ -0.38
SMC4-204ENST00000462787 GHRHP01286 108 aa12.66□□□□□ -0.38
SMC4-204ENST00000462787 PMVKQ15126 192 aa12.66□□□□□ -0.38
SMC4-204ENST00000462787 S100A7L2Q5SY68 101 aa12.66□□□□□ -0.38
SMC4-204ENST00000462787 PIMREGQ9BSJ6 248 aa12.66□□□□□ -0.38
SMC4-204ENST00000462787 ZNF503-AS2A6NEH8 195 aa12.66□□□□□ -0.38
SMC4-204ENST00000462787 ERCC8Q13216 396 aa12.66□□□□□ -0.38
SMC4-204ENST00000462787 Q6ZR03 302 aa12.66□□□□□ -0.38
SMC4-204ENST00000462787 PTPRZ1P23471 2315 aaPredicted RBP12.66□□□□□ -0.38
SMC4-204ENST00000462787 NDUFB8O95169 186 aa12.65□□□□□ -0.38
SMC4-204ENST00000462787 GATA4P43694 442 aa12.65□□□□□ -0.38
SMC4-204ENST00000462787 RNF138Q8WVD3 245 aa12.65□□□□□ -0.38
SMC4-204ENST00000462787 IGHV3-11P01762 117 aa12.65□□□□□ -0.38
SMC4-204ENST00000462787 HLA-DMBP28068 263 aa12.65□□□□□ -0.38
SMC4-204ENST00000462787 HIGD1BQ9P298 99 aa12.65□□□□□ -0.38
SMC4-204ENST00000462787 FAM120AOSQ5T036 256 aa12.65□□□□□ -0.39
SMC4-204ENST00000462787 ICE1Q9Y2F5 2266 aa12.65□□□□□ -0.39
SMC4-204ENST00000462787 THSD7BQ9C0I4 1608 aa12.64□□□□□ -0.39
SMC4-204ENST00000462787 TRBV25-1A0A075B6N4 114 aa12.64□□□□□ -0.39
SMC4-204ENST00000462787 TRBV7-1A0A0A6YYK4 115 aa12.64□□□□□ -0.39
SMC4-204ENST00000462787 TCF15Q12870 199 aa12.64□□□□□ -0.39
SMC4-204ENST00000462787 MINOS1Q5TGZ0 78 aa12.64□□□□□ -0.39
SMC4-204ENST00000462787 LINC00311Q8N616 119 aa12.64□□□□□ -0.39
SMC4-204ENST00000462787 MINOS1-NBL1R4GNA1 71 aa12.64□□□□□ -0.39
SMC4-204ENST00000462787 FGF6P10767 208 aa12.64□□□□□ -0.39
SMC4-204ENST00000462787 LY6G5BQ8NDX9 201 aa12.64□□□□□ -0.39
SMC4-204ENST00000462787 ZNRD1Q9P1U0 126 aa12.64□□□□□ -0.39
SMC4-204ENST00000462787 TP53TG1Q9Y2A0 90 aa12.64□□□□□ -0.39
SMC4-204ENST00000462787 CHD3Q12873 2000 aaKnown RBP12.64□□□□□ -0.39
SMC4-204ENST00000462787 NPC2P61916 151 aa12.64□□□□□ -0.39
SMC4-204ENST00000462787 SH2D6Q7Z4S9 175 aa12.64□□□□□ -0.39
SMC4-204ENST00000462787 ABHD17AQ96GS6 310 aa12.64□□□□□ -0.39
SMC4-204ENST00000462787 LINC01587Q99440 93 aa12.64□□□□□ -0.39
SMC4-204ENST00000462787 SMIM2Q9BVW6 85 aa12.64□□□□□ -0.39
SMC4-204ENST00000462787 SRRM4A7MD48 611 aaKnown RBP12.63□□□□□ -0.39
SMC4-204ENST00000462787 DTX2Q86UW9 622 aa12.63□□□□□ -0.39
SMC4-204ENST00000462787 COL4A3Q01955 1670 aa12.63□□□□□ -0.39
SMC4-204ENST00000462787 IGHG3P01860 377 aa12.63□□□□□ -0.39
SMC4-204ENST00000462787 RASL10AQ92737 203 aa12.63□□□□□ -0.39
SMC4-204ENST00000462787 SPAG8Q99932 426 aaPredicted RBP12.63□□□□□ -0.39
SMC4-204ENST00000462787 FGF23Q9GZV9 251 aaPredicted RBP12.63□□□□□ -0.39
SMC4-204ENST00000462787 Q8TCH9 128 aa12.63□□□□□ -0.39
SMC4-204ENST00000462787 IGHV3OR16-10A0A075B7F0 116 aa12.63□□□□□ -0.39
SMC4-204ENST00000462787 CRPP02741 224 aa12.63□□□□□ -0.39
SMC4-204ENST00000462787 INAFM2P0DMQ5 153 aa12.63□□□□□ -0.39
SMC4-204ENST00000462787 RBX1P62877 108 aa12.63□□□□□ -0.39
SMC4-204ENST00000462787 SPANXCQ9NY87 97 aa12.63□□□□□ -0.39
SMC4-204ENST00000462787 A0A0U1RRA0 63 aa12.62□□□□□ -0.39
SMC4-204ENST00000462787 C11orf68Q9H3H3 251 aaKnown RBP12.62□□□□□ -0.39
SMC4-204ENST00000462787 B5MCH6 92 aa12.62□□□□□ -0.39
SMC4-204ENST00000462787 FCN3O75636 299 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 181.6 ms