RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 CSN1S1P47710 185 aa14.16□□□□□ -0.14
HPS3-202ENST00000460120 C15orf32Q32M92 178 aa14.16□□□□□ -0.14
HPS3-202ENST00000460120 TRAV30A0A087WSZ9 112 aa14.15□□□□□ -0.14
HPS3-202ENST00000460120 TMEM213A2RRL7 107 aa14.15□□□□□ -0.14
HPS3-202ENST00000460120 LINC00614P0C842 121 aa14.15□□□□□ -0.14
HPS3-202ENST00000460120 TMEM219Q86XT9 240 aa14.15□□□□□ -0.14
HPS3-202ENST00000460120 Q8N9W7 124 aa14.15□□□□□ -0.14
HPS3-202ENST00000460120 VGLL1Q99990 258 aa14.15□□□□□ -0.14
HPS3-202ENST00000460120 THYN1Q9P016 225 aa14.15□□□□□ -0.14
HPS3-202ENST00000460120 ZFP30Q9Y2G7 519 aa14.15□□□□□ -0.14
HPS3-202ENST00000460120 ATP6V0E1O15342 81 aa14.15□□□□□ -0.14
HPS3-202ENST00000460120 LEPROTL1O95214 131 aa14.15□□□□□ -0.14
HPS3-202ENST00000460120 UQCR10Q9UDW1 63 aa14.15□□□□□ -0.14
HPS3-202ENST00000460120 FXYD7P58549 80 aa14.14□□□□□ -0.15
HPS3-202ENST00000460120 TMEM70Q9BUB7 260 aa14.14□□□□□ -0.15
HPS3-202ENST00000460120 SIRPDQ9H106 197 aa14.14□□□□□ -0.15
HPS3-202ENST00000460120 HAX1O00165 279 aa14.14□□□□□ -0.15
HPS3-202ENST00000460120 IGLL1P15814 213 aa14.14□□□□□ -0.15
HPS3-202ENST00000460120 DTX2Q86UW9 622 aa14.14□□□□□ -0.15
HPS3-202ENST00000460120 RNF182Q8N6D2 247 aa14.14□□□□□ -0.15
HPS3-202ENST00000460120 Q8N6K4 173 aa14.14□□□□□ -0.15
HPS3-202ENST00000460120 RABAC1Q9UI14 185 aa14.14□□□□□ -0.15
HPS3-202ENST00000460120 RNF24Q9Y225 148 aa14.14□□□□□ -0.15
HPS3-202ENST00000460120 SOX21Q9Y651 276 aaPredicted RBP14.14□□□□□ -0.15
HPS3-202ENST00000460120 hDV102S1A0JD36 115 aa14.14□□□□□ -0.15
HPS3-202ENST00000460120 SH2D1AO60880 128 aa14.14□□□□□ -0.15
HPS3-202ENST00000460120 CLEC3BP05452 202 aa14.14□□□□□ -0.15
HPS3-202ENST00000460120 FAM106CPP0CH98 169 aa14.14□□□□□ -0.15
HPS3-202ENST00000460120 HINT1P49773 126 aaPredicted RBP14.14□□□□□ -0.15
HPS3-202ENST00000460120 LYZL1Q6UWQ5 148 aa14.14□□□□□ -0.15
HPS3-202ENST00000460120 OVOL3O00110 214 aa14.13□□□□□ -0.15
HPS3-202ENST00000460120 ERCC8Q13216 396 aa14.13□□□□□ -0.15
HPS3-202ENST00000460120 SMAD5-AS1Q9Y6J3 95 aa14.13□□□□□ -0.15
HPS3-202ENST00000460120 RHOGP84095 191 aa14.13□□□□□ -0.15
HPS3-202ENST00000460120 RIGQ13278 110 aa14.13□□□□□ -0.15
HPS3-202ENST00000460120 TMEM189A5PLL7 270 aa14.12□□□□□ -0.15
HPS3-202ENST00000460120 OR4C46A6NHA9 309 aa14.12□□□□□ -0.15
HPS3-202ENST00000460120 CLEC19AQ6UXS0 136 aa14.12□□□□□ -0.15
HPS3-202ENST00000460120 Q6ZVH6 145 aa14.12□□□□□ -0.15
HPS3-202ENST00000460120 IGHV2-70DA0A0C4DH43 119 aa14.12□□□□□ -0.15
HPS3-202ENST00000460120 GNLYP22749 145 aa14.12□□□□□ -0.15
HPS3-202ENST00000460120 FAM106AQ4KMX7 169 aa14.12□□□□□ -0.15
HPS3-202ENST00000460120 LYPD1Q8N2G4 141 aa14.12□□□□□ -0.15
HPS3-202ENST00000460120 PRSS47A8MTI9 375 aa14.11□□□□□ -0.15
HPS3-202ENST00000460120 M0QZK8 103 aa14.11□□□□□ -0.15
HPS3-202ENST00000460120 RPL7P18124 248 aaKnown RBP14.11□□□□□ -0.15
HPS3-202ENST00000460120 ZNF80P51504 273 aaPredicted RBP14.11□□□□□ -0.15
HPS3-202ENST00000460120 PIP4P2Q8N4L2 257 aa14.11□□□□□ -0.15
HPS3-202ENST00000460120 TRAV9-2A0A087WT02 112 aa14.11□□□□□ -0.15
HPS3-202ENST00000460120 TCTAP57738 103 aa14.11□□□□□ -0.15
HPS3-202ENST00000460120 MINOS1Q5TGZ0 78 aa14.11□□□□□ -0.15
HPS3-202ENST00000460120 AMN1Q8IY45 258 aa14.11□□□□□ -0.15
HPS3-202ENST00000460120 STPG4Q8N801 248 aa14.11□□□□□ -0.15
HPS3-202ENST00000460120 MINOS1-NBL1R4GNA1 71 aa14.11□□□□□ -0.15
HPS3-202ENST00000460120 SMKR1H3BMG3 65 aa14.1□□□□□ -0.15
HPS3-202ENST00000460120 GAGE1Q13065 139 aa14.1□□□□□ -0.15
HPS3-202ENST00000460120 C16orf54Q6UWD8 224 aa14.1□□□□□ -0.15
HPS3-202ENST00000460120 KLHDC1Q8N7A1 406 aa14.1□□□□□ -0.15
HPS3-202ENST00000460120 FAM231BA6NCW3 169 aa14.1□□□□□ -0.15
HPS3-202ENST00000460120 PRAC2D3DTV9 90 aa14.1□□□□□ -0.15
HPS3-202ENST00000460120 SYS1-DBNDD2H3BUS1 97 aa14.1□□□□□ -0.15
HPS3-202ENST00000460120 PPIFP30405 207 aaKnown RBP14.1□□□□□ -0.15
HPS3-202ENST00000460120 BRD3OSQ6XYD6 125 aa14.1□□□□□ -0.15
HPS3-202ENST00000460120 PRSS3P2Q8NHM4 247 aa14.1□□□□□ -0.15
HPS3-202ENST00000460120 NDFIP1Q9BT67 221 aa14.1□□□□□ -0.15
HPS3-202ENST00000460120 SPG11Q96JI7 2443 aa14.09□□□□□ -0.15
HPS3-202ENST00000460120 D6R8Y8 96 aa14.09□□□□□ -0.15
HPS3-202ENST00000460120 EFNA4P52798 201 aa14.09□□□□□ -0.15
HPS3-202ENST00000460120 LAMTOR2Q9Y2Q5 125 aa14.09□□□□□ -0.15
HPS3-202ENST00000460120 SELENOKQ9Y6D0 94 aa14.09□□□□□ -0.15
HPS3-202ENST00000460120 TCF21O43680 179 aa14.09□□□□□ -0.15
HPS3-202ENST00000460120 RBX1P62877 108 aa14.09□□□□□ -0.15
HPS3-202ENST00000460120 RNASE8Q8TDE3 154 aaKnown RBP14.09□□□□□ -0.15
HPS3-202ENST00000460120 CHCHD1Q96BP2 118 aaKnown RBP14.09□□□□□ -0.15
HPS3-202ENST00000460120 AJUBAQ96IF1 538 aa14.09□□□□□ -0.15
HPS3-202ENST00000460120 TSPOP30536 169 aa14.08□□□□□ -0.15
HPS3-202ENST00000460120 PSG9Q00887 426 aa14.08□□□□□ -0.15
HPS3-202ENST00000460120 LOXL1Q08397 574 aaPredicted RBP14.08□□□□□ -0.15
HPS3-202ENST00000460120 FAM162BQ5T6X4 162 aa14.08□□□□□ -0.15
HPS3-202ENST00000460120 C1orf122Q6ZSJ8 110 aa14.08□□□□□ -0.15
HPS3-202ENST00000460120 S100A7AQ86SG5 101 aa14.08□□□□□ -0.15
HPS3-202ENST00000460120 PRR25Q96S07 402 aa14.08□□□□□ -0.15
HPS3-202ENST00000460120 NCR2O95944 276 aa14.08□□□□□ -0.16
HPS3-202ENST00000460120 ORM1P02763 201 aa14.08□□□□□ -0.16
HPS3-202ENST00000460120 IFI27P40305 119 aaPredicted RBP14.08□□□□□ -0.16
HPS3-202ENST00000460120 UBE2E1P51965 193 aa14.08□□□□□ -0.16
HPS3-202ENST00000460120 PDE6HQ13956 83 aa14.08□□□□□ -0.16
HPS3-202ENST00000460120 LMO4P61968 165 aa14.07□□□□□ -0.16
HPS3-202ENST00000460120 EBI3Q14213 229 aa14.07□□□□□ -0.16
HPS3-202ENST00000460120 TRBV6-1A0A0K0K1D8 114 aa14.07□□□□□ -0.16
HPS3-202ENST00000460120 IGHG4P01861 327 aa14.07□□□□□ -0.16
HPS3-202ENST00000460120 TWIST1Q15672 202 aa14.07□□□□□ -0.16
HPS3-202ENST00000460120 FA2HQ7L5A8 372 aa14.07□□□□□ -0.16
HPS3-202ENST00000460120 COL5A1-AS1Q5SY13 56 aa14.06□□□□□ -0.16
HPS3-202ENST00000460120 ITLN2Q8WWU7 325 aaPredicted RBP14.06□□□□□ -0.16
HPS3-202ENST00000460120 OOSP1A8MZH6 123 aa14.06□□□□□ -0.16
HPS3-202ENST00000460120 CLEC2AQ6UVW9 174 aa14.06□□□□□ -0.16
HPS3-202ENST00000460120 AP5S1Q9NUS5 200 aa14.06□□□□□ -0.16
HPS3-202ENST00000460120 MSRB1Q9NZV6 116 aa14.06□□□□□ -0.16
HPS3-202ENST00000460120 NPFFO15130 113 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 113.7 ms