RNA–Protein interactions for RNA: ENST00000457888.2

UBDP1-202, Transcript of ubiquitin D pseudogene 1, humanhuman

BASIC

Gene UBDP1, Length 382 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBDP1-202ENST00000457888 WI2-2373I1.2A0A1W2PRP0 233 aa2.84□□□□□ -1.95
UBDP1-202ENST00000457888 FAM223BA6NKX1 122 aa2.84□□□□□ -1.95
UBDP1-202ENST00000457888 LINC01619G3V211 115 aa2.84□□□□□ -1.95
UBDP1-202ENST00000457888 K7EQM0 130 aa2.84□□□□□ -1.95
UBDP1-202ENST00000457888 TGOLN2O43493 480 aa2.84□□□□□ -1.95
UBDP1-202ENST00000457888 TSC22D2O75157 780 aa2.84□□□□□ -1.95
UBDP1-202ENST00000457888 ATG12O94817 140 aa2.84□□□□□ -1.95
UBDP1-202ENST00000457888 IFNA10P01566 189 aa2.84□□□□□ -1.95
UBDP1-202ENST00000457888 IFNA21P01568 189 aa2.84□□□□□ -1.95
UBDP1-202ENST00000457888 DEFA4P12838 97 aa2.84□□□□□ -1.95
UBDP1-202ENST00000457888 HIST1H1BP16401 226 aaKnown RBP2.84□□□□□ -1.95
UBDP1-202ENST00000457888 NPY1RP25929 384 aa2.84□□□□□ -1.95
UBDP1-202ENST00000457888 SNCAP37840 140 aa2.84□□□□□ -1.95
UBDP1-202ENST00000457888 ATP5IP56385 69 aaPredicted RBP2.84□□□□□ -1.95
UBDP1-202ENST00000457888 SYNJ2BPP57105 145 aa2.84□□□□□ -1.95
UBDP1-202ENST00000457888 ZNF616Q08AN1 781 aa2.84□□□□□ -1.95
UBDP1-202ENST00000457888 EGFEM1PQ0D2K5 195 aa2.84□□□□□ -1.95
UBDP1-202ENST00000457888 LGALSLQ3ZCW2 172 aaPredicted RBP2.84□□□□□ -1.95
UBDP1-202ENST00000457888 KPRPQ5T749 579 aaPredicted RBP2.84□□□□□ -1.95
UBDP1-202ENST00000457888 C9orf66Q5T8R8 295 aa2.84□□□□□ -1.95
UBDP1-202ENST00000457888 LAMTOR1Q6IAA8 161 aa2.84□□□□□ -1.95
UBDP1-202ENST00000457888 FAM223AQ8IWN6 122 aa2.84□□□□□ -1.95
UBDP1-202ENST00000457888 LINC01561Q8N1V8 128 aa2.84□□□□□ -1.95
UBDP1-202ENST00000457888 RNASEH2CQ8TDP1 164 aaKnown RBP2.84□□□□□ -1.95
UBDP1-202ENST00000457888 CACNG8Q8WXS5 425 aa2.84□□□□□ -1.95
UBDP1-202ENST00000457888 PINX1Q96BK5 328 aaKnown RBP2.84□□□□□ -1.95
UBDP1-202ENST00000457888 OCR1Q9BZK8 76 aa2.84□□□□□ -1.95
UBDP1-202ENST00000457888 CYTL1Q9NRR1 136 aa2.84□□□□□ -1.95
UBDP1-202ENST00000457888 LYRM2Q9NU23 88 aaPredicted RBP2.84□□□□□ -1.95
UBDP1-202ENST00000457888 C21orf62Q9NYP8 219 aa2.84□□□□□ -1.95
UBDP1-202ENST00000457888 MLXQ9UH92 298 aa2.84□□□□□ -1.95
UBDP1-202ENST00000457888 LSM5Q9Y4Y9 91 aaKnown RBP2.84□□□□□ -1.95
UBDP1-202ENST00000457888 DNAH10Q8IVF4 4471 aa2.84□□□□□ -1.96
UBDP1-202ENST00000457888 DNAH6Q9C0G6 4158 aa2.83□□□□□ -1.96
UBDP1-202ENST00000457888 IGHV3-49A0A0A0MS15 119 aa2.83□□□□□ -1.96
UBDP1-202ENST00000457888 IGHV3-16A0A0C4DH30 117 aa2.83□□□□□ -1.96
UBDP1-202ENST00000457888 C2orf70A6NJV1 201 aa2.83□□□□□ -1.96
UBDP1-202ENST00000457888 KRTAP16-1A8MUX0 517 aa2.83□□□□□ -1.96
UBDP1-202ENST00000457888 LGALS9O00182 355 aa2.83□□□□□ -1.96
UBDP1-202ENST00000457888 MRPS12O15235 138 aaKnown RBP2.83□□□□□ -1.96
UBDP1-202ENST00000457888 ZNF207O43670 478 aaKnown RBP2.83□□□□□ -1.96
UBDP1-202ENST00000457888 SSNA1O43805 119 aa2.83□□□□□ -1.96
UBDP1-202ENST00000457888 GGCTO75223 188 aaKnown RBP2.83□□□□□ -1.96
UBDP1-202ENST00000457888 MED6O75586 246 aa2.83□□□□□ -1.96
UBDP1-202ENST00000457888 YIF1AO95070 293 aa2.83□□□□□ -1.96
UBDP1-202ENST00000457888 IGLV1-51P01701 117 aa2.83□□□□□ -1.96
UBDP1-202ENST00000457888 PRB2P02812 416 aaPredicted RBP2.83□□□□□ -1.96
UBDP1-202ENST00000457888 SLC25A4P12235 298 aa2.83□□□□□ -1.96
UBDP1-202ENST00000457888 CXCL2P19875 107 aa2.83□□□□□ -1.96
UBDP1-202ENST00000457888 CBLN1P23435 193 aa2.83□□□□□ -1.96
UBDP1-202ENST00000457888 CRYBB3P26998 211 aa2.83□□□□□ -1.96
UBDP1-202ENST00000457888 P2RY1P47900 373 aa2.83□□□□□ -1.96
UBDP1-202ENST00000457888 BCAP31P51572 246 aa2.83□□□□□ -1.96
UBDP1-202ENST00000457888 RND2P52198 227 aa2.83□□□□□ -1.96
UBDP1-202ENST00000457888 YPEL3P61236 119 aaPredicted RBP2.83□□□□□ -1.96
UBDP1-202ENST00000457888 EWSR1Q01844 656 aaKnown RBP eCLIP2.83□□□□□ -1.96
UBDP1-202ENST00000457888 USF2Q15853 346 aaPredicted RBP2.83□□□□□ -1.96
UBDP1-202ENST00000457888 DEFB114Q30KQ6 69 aa2.83□□□□□ -1.96
UBDP1-202ENST00000457888 GCSAMLQ5JQS6 135 aa2.83□□□□□ -1.96
UBDP1-202ENST00000457888 LEMD1Q68G75 181 aa2.83□□□□□ -1.96
UBDP1-202ENST00000457888 ACOT7LQ6ZUV0 252 aa2.83□□□□□ -1.96
UBDP1-202ENST00000457888 SLC16A13Q7RTY0 426 aa2.83□□□□□ -1.96
UBDP1-202ENST00000457888 TMEM144Q7Z5S9 345 aa2.83□□□□□ -1.96
UBDP1-202ENST00000457888 OR9G4Q8NGQ1 327 aa2.83□□□□□ -1.96
UBDP1-202ENST00000457888 OR1L6Q8NGR2 347 aa2.83□□□□□ -1.96
UBDP1-202ENST00000457888 RNASE11Q8TAA1 199 aaKnown RBP2.83□□□□□ -1.96
UBDP1-202ENST00000457888 EEF1AKMT3Q96AZ1 226 aa2.83□□□□□ -1.96
UBDP1-202ENST00000457888 MGST2Q99735 147 aa2.83□□□□□ -1.96
UBDP1-202ENST00000457888 MED28Q9H204 178 aa2.83□□□□□ -1.96
UBDP1-202ENST00000457888 VSIRQ9H7M9 311 aa2.83□□□□□ -1.96
UBDP1-202ENST00000457888 SIGLEC8Q9NYZ4 499 aa2.83□□□□□ -1.96
UBDP1-202ENST00000457888 MRPL27Q9P0M9 148 aaKnown RBP2.83□□□□□ -1.96
UBDP1-202ENST00000457888 SMPXQ9UHP9 88 aa2.83□□□□□ -1.96
UBDP1-202ENST00000457888 ZNF256Q9Y2P7 627 aaPredicted RBP2.83□□□□□ -1.96
UBDP1-202ENST00000457888 PUS1Q9Y606 427 aaKnown RBP eCLIP2.83□□□□□ -1.96
UBDP1-202ENST00000457888 DNAH17Q9UFH2 4485 aa2.83□□□□□ -1.96
UBDP1-202ENST00000457888 TENM2Q9NT68 2774 aa2.83□□□□□ -1.96
UBDP1-202ENST00000457888 IGHV3OR16-13A0A075B7E8 117 aa2.82□□□□□ -1.96
UBDP1-202ENST00000457888 IGHV3-74A0A0B4J1X5 117 aa2.82□□□□□ -1.96
UBDP1-202ENST00000457888 TRAV5A0A0B4J249 113 aa2.82□□□□□ -1.96
UBDP1-202ENST00000457888 A0A0J9YWU9 116 aa2.82□□□□□ -1.96
UBDP1-202ENST00000457888 A8MWP6 167 aa2.82□□□□□ -1.96
UBDP1-202ENST00000457888 FNDC10F2Z333 226 aa2.82□□□□□ -1.96
UBDP1-202ENST00000457888 K7EMT4 169 aa2.82□□□□□ -1.96
UBDP1-202ENST00000457888 NDUFA4O00483 81 aa2.82□□□□□ -1.96
UBDP1-202ENST00000457888 OVOL1O14753 267 aa2.82□□□□□ -1.96
UBDP1-202ENST00000457888 EIF3GO75821 320 aaKnown RBP eCLIP2.82□□□□□ -1.96
UBDP1-202ENST00000457888 IFNA4P05014 189 aa2.82□□□□□ -1.96
UBDP1-202ENST00000457888 GIPP09681 153 aaPredicted RBP2.82□□□□□ -1.96
UBDP1-202ENST00000457888 FOLR2P14207 255 aa2.82□□□□□ -1.96
UBDP1-202ENST00000457888 RPL12P30050 165 aaKnown RBP2.82□□□□□ -1.96
UBDP1-202ENST00000457888 OR10J1P30954 320 aa2.82□□□□□ -1.96
UBDP1-202ENST00000457888 OPRK1P41145 380 aa2.82□□□□□ -1.96
UBDP1-202ENST00000457888 SULT1A1P50225 295 aa2.82□□□□□ -1.96
UBDP1-202ENST00000457888 SUB1P53999 127 aaKnown RBP eCLIP2.82□□□□□ -1.96
UBDP1-202ENST00000457888 PLP1P60201 277 aa2.82□□□□□ -1.96
UBDP1-202ENST00000457888 SLC38A11Q08AI6 406 aa2.82□□□□□ -1.96
UBDP1-202ENST00000457888 OR2F1Q13607 317 aa2.82□□□□□ -1.96
UBDP1-202ENST00000457888 OR8G2PQ6IF36 304 aa2.82□□□□□ -1.96
UBDP1-202ENST00000457888 Q8N377 158 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms