RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 INAFM1C9JVW0 142 aa2.8□□□□□ -1.96
HMGB3P8-201ENST00000449709 ATP5LO75964 103 aa2.8□□□□□ -1.96
HMGB3P8-201ENST00000449709 LTAP01374 205 aa2.8□□□□□ -1.96
HMGB3P8-201ENST00000449709 LGALS1P09382 135 aaKnown RBP2.8□□□□□ -1.96
HMGB3P8-201ENST00000449709 ARL14EPLP0DKL9 152 aa2.8□□□□□ -1.96
HMGB3P8-201ENST00000449709 SLC25A16P16260 332 aa2.8□□□□□ -1.96
HMGB3P8-201ENST00000449709 CTLA4P16410 223 aa2.8□□□□□ -1.96
HMGB3P8-201ENST00000449709 RPL35AP18077 110 aaKnown RBP2.8□□□□□ -1.96
HMGB3P8-201ENST00000449709 CRYGSP22914 178 aa2.8□□□□□ -1.96
HMGB3P8-201ENST00000449709 CA6P23280 308 aa2.8□□□□□ -1.96
HMGB3P8-201ENST00000449709 NBL1P41271 181 aa2.8□□□□□ -1.96
HMGB3P8-201ENST00000449709 RPS27P42677 84 aaKnown RBP2.8□□□□□ -1.96
HMGB3P8-201ENST00000449709 RBM11P57052 281 aaKnown RBP2.8□□□□□ -1.96
HMGB3P8-201ENST00000449709 TFF3Q07654 80 aa2.8□□□□□ -1.96
HMGB3P8-201ENST00000449709 KISS1Q15726 138 aa2.8□□□□□ -1.96
HMGB3P8-201ENST00000449709 ZC2HC1BQ5TFG8 222 aa2.8□□□□□ -1.96
HMGB3P8-201ENST00000449709 DGAT2L6Q6ZPD8 337 aa2.8□□□□□ -1.96
HMGB3P8-201ENST00000449709 AAED1Q7RTV5 226 aa2.8□□□□□ -1.96
HMGB3P8-201ENST00000449709 PDPNQ86YL7 162 aa2.8□□□□□ -1.96
HMGB3P8-201ENST00000449709 ZNF441Q8N8Z8 693 aa2.8□□□□□ -1.96
HMGB3P8-201ENST00000449709 KLHDC9Q8NEP7 349 aa2.8□□□□□ -1.96
HMGB3P8-201ENST00000449709 ZDHHC19Q8WVZ1 309 aaPredicted RBP2.8□□□□□ -1.96
HMGB3P8-201ENST00000449709 IFI27L1Q96BM0 104 aa2.8□□□□□ -1.96
HMGB3P8-201ENST00000449709 FAM19A4Q96LR4 140 aa2.8□□□□□ -1.96
HMGB3P8-201ENST00000449709 HDHD3Q9BSH5 251 aaPredicted RBP2.8□□□□□ -1.96
HMGB3P8-201ENST00000449709 CHCHD5Q9BSY4 110 aa2.8□□□□□ -1.96
HMGB3P8-201ENST00000449709 MRPL20Q9BYC9 149 aaKnown RBP2.8□□□□□ -1.96
HMGB3P8-201ENST00000449709 AGPAT4-IT1Q9H0P7 198 aa2.8□□□□□ -1.96
HMGB3P8-201ENST00000449709 RNASE7Q9H1E1 156 aaKnown RBP2.8□□□□□ -1.96
HMGB3P8-201ENST00000449709 C6orf106Q9H6K1 298 aaPredicted RBP2.8□□□□□ -1.96
HMGB3P8-201ENST00000449709 TMEM167BQ9NRX6 74 aa2.8□□□□□ -1.96
HMGB3P8-201ENST00000449709 AGRNO00468 2067 aa2.8□□□□□ -1.96
HMGB3P8-201ENST00000449709 TRAV17A0A0B4J275 112 aa2.79□□□□□ -1.96
HMGB3P8-201ENST00000449709 IGKV1D-13A0A0B4J2D9 117 aa2.79□□□□□ -1.96
HMGB3P8-201ENST00000449709 IGKV1-8A0A0C4DH67 115 aa2.79□□□□□ -1.96
HMGB3P8-201ENST00000449709 C15orf61A6NNL5 157 aa2.79□□□□□ -1.96
HMGB3P8-201ENST00000449709 H3BP45 60 aa2.79□□□□□ -1.96
HMGB3P8-201ENST00000449709 H3BSH0 61 aa2.79□□□□□ -1.96
HMGB3P8-201ENST00000449709 UPK2O00526 184 aa2.79□□□□□ -1.96
HMGB3P8-201ENST00000449709 DPM2O94777 84 aa2.79□□□□□ -1.96
HMGB3P8-201ENST00000449709 TCL1BO95988 128 aa2.79□□□□□ -1.96
HMGB3P8-201ENST00000449709 IL4P05112 153 aa2.79□□□□□ -1.96
HMGB3P8-201ENST00000449709 ACYP1P07311 99 aa2.79□□□□□ -1.96
HMGB3P8-201ENST00000449709 SCGB1C2P0DMR2 95 aa2.79□□□□□ -1.96
HMGB3P8-201ENST00000449709 IGKV1-13P0DP09 117 aa2.79□□□□□ -1.96
HMGB3P8-201ENST00000449709 HOXD3P31249 432 aaPredicted RBP2.79□□□□□ -1.96
HMGB3P8-201ENST00000449709 PFN2P35080 140 aa2.79□□□□□ -1.96
HMGB3P8-201ENST00000449709 SSR2P43308 183 aa2.79□□□□□ -1.96
HMGB3P8-201ENST00000449709 FXYD4P59646 89 aa2.79□□□□□ -1.96
HMGB3P8-201ENST00000449709 PPP1CAP62136 330 aa2.79□□□□□ -1.96
HMGB3P8-201ENST00000449709 LOXL1Q08397 574 aaPredicted RBP2.79□□□□□ -1.96
HMGB3P8-201ENST00000449709 Q0VFX4 171 aa2.79□□□□□ -1.96
HMGB3P8-201ENST00000449709 EIF4EBP1Q13541 118 aaPredicted RBP2.79□□□□□ -1.96
HMGB3P8-201ENST00000449709 OR1C1Q15619 314 aa2.79□□□□□ -1.96
HMGB3P8-201ENST00000449709 PLPP4Q5VZY2 271 aa2.79□□□□□ -1.96
HMGB3P8-201ENST00000449709 AMN1Q8IY45 258 aa2.79□□□□□ -1.96
HMGB3P8-201ENST00000449709 C10orf126Q8N4M7 172 aa2.79□□□□□ -1.96
HMGB3P8-201ENST00000449709 NT5CQ8TCD5 201 aa2.79□□□□□ -1.96
HMGB3P8-201ENST00000449709 PRRG4Q9BZD6 226 aa2.79□□□□□ -1.96
HMGB3P8-201ENST00000449709 SLC25A39Q9BZJ4 359 aaPredicted RBP2.79□□□□□ -1.96
HMGB3P8-201ENST00000449709 CACNG5Q9UF02 275 aa2.79□□□□□ -1.96
HMGB3P8-201ENST00000449709 KLK5Q9Y337 293 aaPredicted RBP2.79□□□□□ -1.96
HMGB3P8-201ENST00000449709 SNRNP200O75643 2136 aaKnown RBP2.78□□□□□ -1.96
HMGB3P8-201ENST00000449709 ARHGEF17Q96PE2 2063 aaPredicted RBP2.78□□□□□ -1.96
HMGB3P8-201ENST00000449709 IGLV5-52A0A0A0MRZ9 124 aa2.78□□□□□ -1.96
HMGB3P8-201ENST00000449709 TRAV2A0A0B4J234 112 aa2.78□□□□□ -1.96
HMGB3P8-201ENST00000449709 IGKV1-6A0A0C4DH72 117 aa2.78□□□□□ -1.96
HMGB3P8-201ENST00000449709 TRBV6-1A0A0K0K1D8 114 aa2.78□□□□□ -1.96
HMGB3P8-201ENST00000449709 HIGD1CA8MV81 97 aa2.78□□□□□ -1.96
HMGB3P8-201ENST00000449709 TMEM150CB9EJG8 249 aa2.78□□□□□ -1.96
HMGB3P8-201ENST00000449709 H3BT86 120 aa2.78□□□□□ -1.96
HMGB3P8-201ENST00000449709 ATOX1O00244 68 aa2.78□□□□□ -1.96
HMGB3P8-201ENST00000449709 ZNHIT1O43257 154 aa2.78□□□□□ -1.96
HMGB3P8-201ENST00000449709 SLC25A20O43772 301 aa2.78□□□□□ -1.96
HMGB3P8-201ENST00000449709 IGKV1D-16P01601 117 aa2.78□□□□□ -1.96
HMGB3P8-201ENST00000449709 IGKCP01834 107 aa2.78□□□□□ -1.96
HMGB3P8-201ENST00000449709 HBDP02042 147 aa2.78□□□□□ -1.96
HMGB3P8-201ENST00000449709 MGST1P10620 155 aaKnown RBP2.78□□□□□ -1.96
HMGB3P8-201ENST00000449709 MYCNOSP40205 109 aa2.78□□□□□ -1.96
HMGB3P8-201ENST00000449709 CCL11P51671 97 aa2.78□□□□□ -1.96
HMGB3P8-201ENST00000449709 CACNG7P62955 275 aa2.78□□□□□ -1.96
HMGB3P8-201ENST00000449709 SRSF9Q13242 221 aaKnown RBP eCLIP2.78□□□□□ -1.96
HMGB3P8-201ENST00000449709 FXYD3Q14802 87 aa2.78□□□□□ -1.96
HMGB3P8-201ENST00000449709 KRTAP15-1Q3LI76 137 aa2.78□□□□□ -1.96
HMGB3P8-201ENST00000449709 TMEM170BQ5T4T1 132 aa2.78□□□□□ -1.96
HMGB3P8-201ENST00000449709 C1orf195Q5TG92 126 aa2.78□□□□□ -1.96
HMGB3P8-201ENST00000449709 GFRALQ6UXV0 394 aa2.78□□□□□ -1.96
HMGB3P8-201ENST00000449709 ZNF575Q86XF7 245 aa2.78□□□□□ -1.96
HMGB3P8-201ENST00000449709 NDUFA11Q86Y39 141 aa2.78□□□□□ -1.96
HMGB3P8-201ENST00000449709 EXOC3-AS1Q8N2X6 119 aa2.78□□□□□ -1.96
HMGB3P8-201ENST00000449709 FGFRL1Q8N441 504 aa2.78□□□□□ -1.96
HMGB3P8-201ENST00000449709 DRAM1Q8N682 238 aa2.78□□□□□ -1.96
HMGB3P8-201ENST00000449709 WDR31Q8NA23 367 aa2.78□□□□□ -1.96
HMGB3P8-201ENST00000449709 ZNF414Q96IQ9 312 aa2.78□□□□□ -1.96
HMGB3P8-201ENST00000449709 PHPT1Q9NRX4 125 aaPredicted RBP2.78□□□□□ -1.96
HMGB3P8-201ENST00000449709 TRAV12-2A0A075B6T6 113 aa2.77□□□□□ -1.97
HMGB3P8-201ENST00000449709 TRAV8-2A0A0B4J237 113 aa2.77□□□□□ -1.97
HMGB3P8-201ENST00000449709 TRAV8-4A0A0B4J246 113 aa2.77□□□□□ -1.97
HMGB3P8-201ENST00000449709 LY6G6EA0A0G2JKS1 128 aa2.77□□□□□ -1.97
HMGB3P8-201ENST00000449709 TRBV10-2A0A0K0K1G8 114 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms