RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 IL1F10Q8WWZ1 152 aa3.31□□□□□ -1.88
HMGB1P16-201ENST00000447155 ARPC1AQ92747 370 aa3.31□□□□□ -1.88
HMGB1P16-201ENST00000447155 IGF2BP2-AS1Q96M15 143 aa3.31□□□□□ -1.88
HMGB1P16-201ENST00000447155 HSD17B10Q99714 261 aaKnown RBP3.31□□□□□ -1.88
HMGB1P16-201ENST00000447155 NRTNQ99748 197 aa3.31□□□□□ -1.88
HMGB1P16-201ENST00000447155 CHAC1Q9BUX1 264 aa3.31□□□□□ -1.88
HMGB1P16-201ENST00000447155 EMC6Q9BV81 110 aa3.31□□□□□ -1.88
HMGB1P16-201ENST00000447155 SLC25A2Q9BXI2 301 aa3.31□□□□□ -1.88
HMGB1P16-201ENST00000447155 RNASE7Q9H1E1 156 aaKnown RBP3.31□□□□□ -1.88
HMGB1P16-201ENST00000447155 HRASLS2Q9NWW9 162 aa3.31□□□□□ -1.88
HMGB1P16-201ENST00000447155 ZNF492Q9P255 531 aa3.31□□□□□ -1.88
HMGB1P16-201ENST00000447155 DPM3Q9P2X0 92 aa3.31□□□□□ -1.88
HMGB1P16-201ENST00000447155 SHANK1Q9Y566 2161 aa3.31□□□□□ -1.88
HMGB1P16-201ENST00000447155 EML6Q6ZMW3 1958 aa3.31□□□□□ -1.88
HMGB1P16-201ENST00000447155 NCBP2LA6PVI3 153 aaKnown RBP3.3□□□□□ -1.88
HMGB1P16-201ENST00000447155 FABP5P3A8MUU1 101 aa3.3□□□□□ -1.88
HMGB1P16-201ENST00000447155 C21orf140B9A014 251 aa3.3□□□□□ -1.88
HMGB1P16-201ENST00000447155 PEX7O00628 323 aa3.3□□□□□ -1.88
HMGB1P16-201ENST00000447155 HBDP02042 147 aa3.3□□□□□ -1.88
HMGB1P16-201ENST00000447155 IGKV3-11P04433 115 aa3.3□□□□□ -1.88
HMGB1P16-201ENST00000447155 P04436 131 aa3.3□□□□□ -1.88
HMGB1P16-201ENST00000447155 IL4P05112 153 aa3.3□□□□□ -1.88
HMGB1P16-201ENST00000447155 SCTP09683 121 aa3.3□□□□□ -1.88
HMGB1P16-201ENST00000447155 FGF6P10767 208 aa3.3□□□□□ -1.88
HMGB1P16-201ENST00000447155 CRYGSP22914 178 aa3.3□□□□□ -1.88
HMGB1P16-201ENST00000447155 VDAC2P45880 294 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P16-201ENST00000447155 HES1Q14469 280 aa3.3□□□□□ -1.88
HMGB1P16-201ENST00000447155 DEFB110Q30KQ9 67 aa3.3□□□□□ -1.88
HMGB1P16-201ENST00000447155 ETDBQ3ZM63 59 aa3.3□□□□□ -1.88
HMGB1P16-201ENST00000447155 TTC32Q5I0X7 151 aa3.3□□□□□ -1.88
HMGB1P16-201ENST00000447155 MIC13Q5XKP0 118 aa3.3□□□□□ -1.88
HMGB1P16-201ENST00000447155 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P16-201ENST00000447155 Q6Q795 121 aa3.3□□□□□ -1.88
HMGB1P16-201ENST00000447155 C2orf66Q6UXQ4 117 aa3.3□□□□□ -1.88
HMGB1P16-201ENST00000447155 SMIM20Q8N5G0 67 aa3.3□□□□□ -1.88
HMGB1P16-201ENST00000447155 NUP35Q8NFH5 326 aa3.3□□□□□ -1.88
HMGB1P16-201ENST00000447155 OR1L4Q8NGR5 311 aa3.3□□□□□ -1.88
HMGB1P16-201ENST00000447155 OR10J6PQ8NGY7 276 aa3.3□□□□□ -1.88
HMGB1P16-201ENST00000447155 GTSF1Q8WW33 167 aa3.3□□□□□ -1.88
HMGB1P16-201ENST00000447155 PIGCQ92535 297 aa3.3□□□□□ -1.88
HMGB1P16-201ENST00000447155 FMC1Q96HJ9 113 aa3.3□□□□□ -1.88
HMGB1P16-201ENST00000447155 MGST2Q99735 147 aa3.3□□□□□ -1.88
HMGB1P16-201ENST00000447155 NDFIP1Q9BT67 221 aa3.3□□□□□ -1.88
HMGB1P16-201ENST00000447155 IFI27L2Q9H2X8 130 aa3.3□□□□□ -1.88
HMGB1P16-201ENST00000447155 ZNF355PQ9NSJ1 428 aa3.3□□□□□ -1.88
HMGB1P16-201ENST00000447155 NHP2Q9NX24 153 aaKnown RBP3.3□□□□□ -1.88
HMGB1P16-201ENST00000447155 CCL26Q9Y258 94 aa3.3□□□□□ -1.88
HMGB1P16-201ENST00000447155 POLDIP2Q9Y2S7 368 aa3.3□□□□□ -1.88
HMGB1P16-201ENST00000447155 UFC1Q9Y3C8 167 aa3.3□□□□□ -1.88
HMGB1P16-201ENST00000447155 KLF12Q9Y4X4 402 aa3.3□□□□□ -1.88
HMGB1P16-201ENST00000447155 TRBV20-1A0A075B6N2 111 aa3.29□□□□□ -1.88
HMGB1P16-201ENST00000447155 IGKV1-27A0A075B6S5 117 aa3.29□□□□□ -1.88
HMGB1P16-201ENST00000447155 TRAV5A0A0B4J249 113 aa3.29□□□□□ -1.88
HMGB1P16-201ENST00000447155 IGKV1-12A0A0C4DH73 117 aa3.29□□□□□ -1.88
HMGB1P16-201ENST00000447155 TMEM30CPA0ZSE6 113 aa3.29□□□□□ -1.88
HMGB1P16-201ENST00000447155 TMEM213A2RRL7 107 aa3.29□□□□□ -1.88
HMGB1P16-201ENST00000447155 E9PLD3 99 aa3.29□□□□□ -1.88
HMGB1P16-201ENST00000447155 LINC01619G3V211 115 aa3.29□□□□□ -1.88
HMGB1P16-201ENST00000447155 J3KT08 172 aa3.29□□□□□ -1.88
HMGB1P16-201ENST00000447155 CCL16O15467 120 aa3.29□□□□□ -1.88
HMGB1P16-201ENST00000447155 COX7A2P2O60397 106 aa3.29□□□□□ -1.88
HMGB1P16-201ENST00000447155 FOXH1O75593 365 aa3.29□□□□□ -1.88
HMGB1P16-201ENST00000447155 DUSP14O95147 198 aaKnown RBP3.29□□□□□ -1.88
HMGB1P16-201ENST00000447155 IGKV1-39P01597 117 aa3.29□□□□□ -1.88
HMGB1P16-201ENST00000447155 IGKV1D-12P01611 117 aa3.29□□□□□ -1.88
HMGB1P16-201ENST00000447155 IGKV1D-39P04432 117 aa3.29□□□□□ -1.88
HMGB1P16-201ENST00000447155 ZNF688P0C7X2 276 aa3.29□□□□□ -1.88
HMGB1P16-201ENST00000447155 P0C879 139 aa3.29□□□□□ -1.88
HMGB1P16-201ENST00000447155 C8orf88P0DMB2 117 aa3.29□□□□□ -1.88
HMGB1P16-201ENST00000447155 IFITM1P13164 125 aa3.29□□□□□ -1.88
HMGB1P16-201ENST00000447155 CACNG7P62955 275 aa3.29□□□□□ -1.88
HMGB1P16-201ENST00000447155 CXCL6P80162 114 aa3.29□□□□□ -1.88
HMGB1P16-201ENST00000447155 RRN3P1Q2M238 152 aa3.29□□□□□ -1.88
HMGB1P16-201ENST00000447155 TBC1D28Q2M2D7 210 aa3.29□□□□□ -1.88
HMGB1P16-201ENST00000447155 PRR30Q53SZ7 412 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P16-201ENST00000447155 FAM27BQ5VT28 67 aa3.29□□□□□ -1.88
HMGB1P16-201ENST00000447155 Q6P435 159 aa3.29□□□□□ -1.88
HMGB1P16-201ENST00000447155 SLC25A48Q6ZT89 311 aaKnown RBP3.29□□□□□ -1.88
HMGB1P16-201ENST00000447155 TEN1Q86WV5 123 aa3.29□□□□□ -1.88
HMGB1P16-201ENST00000447155 CEND1Q8N111 149 aa3.29□□□□□ -1.88
HMGB1P16-201ENST00000447155 SPEM1Q8N4L4 309 aa3.29□□□□□ -1.88
HMGB1P16-201ENST00000447155 DRAM1Q8N682 238 aa3.29□□□□□ -1.88
HMGB1P16-201ENST00000447155 KLHL30-AS1Q8NEE0 82 aa3.29□□□□□ -1.88
HMGB1P16-201ENST00000447155 OR8A1Q8NGG7 326 aa3.29□□□□□ -1.88
HMGB1P16-201ENST00000447155 OR13C6PQ8NH95 151 aa3.29□□□□□ -1.88
HMGB1P16-201ENST00000447155 PTH2Q96A98 100 aa3.29□□□□□ -1.88
HMGB1P16-201ENST00000447155 COQ2Q96H96 371 aa3.29□□□□□ -1.88
HMGB1P16-201ENST00000447155 CYYR1Q96J86 154 aa3.29□□□□□ -1.88
HMGB1P16-201ENST00000447155 ZNF714Q96N38 554 aa3.29□□□□□ -1.88
HMGB1P16-201ENST00000447155 IDI2-AS1Q9NZ38 188 aa3.29□□□□□ -1.88
HMGB1P16-201ENST00000447155 AMMECR1Q9Y4X0 333 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P16-201ENST00000447155 GTF3C1Q12789 2109 aa3.28□□□□□ -1.88
HMGB1P16-201ENST00000447155 IGKV3D-11A0A0A0MRZ8 115 aa3.28□□□□□ -1.88
HMGB1P16-201ENST00000447155 IGLV3-32A0A0A0MS00 114 aa3.28□□□□□ -1.88
HMGB1P16-201ENST00000447155 IGHV3-35A0A0C4DH35 117 aa3.28□□□□□ -1.88
HMGB1P16-201ENST00000447155 TCRBV4S1A1TA0A5B7 111 aa3.28□□□□□ -1.88
HMGB1P16-201ENST00000447155 A8MWV9 139 aa3.28□□□□□ -1.88
HMGB1P16-201ENST00000447155 GGTLC3B5MD39 225 aa3.28□□□□□ -1.88
HMGB1P16-201ENST00000447155 J3QT63 122 aa3.28□□□□□ -1.88
HMGB1P16-201ENST00000447155 M0QXV9 152 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms