RNA–Protein interactions for RNA: ENST00000441350.2

VPS13B-204, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-204ENST00000441350 ID1P41134 155 aa15.78■□□□□ 0.12
VPS13B-204ENST00000441350 LCN12Q6JVE5 192 aa15.78■□□□□ 0.12
VPS13B-204ENST00000441350 MRPL53Q96EL3 112 aaKnown RBP15.78■□□□□ 0.12
VPS13B-204ENST00000441350 EPDR1Q9UM22 224 aa15.78■□□□□ 0.12
VPS13B-204ENST00000441350 SRP19P09132 144 aaKnown RBP15.77■□□□□ 0.12
VPS13B-204ENST00000441350 IGLL1P15814 213 aa15.77■□□□□ 0.12
VPS13B-204ENST00000441350 PSG3Q16557 428 aa15.77■□□□□ 0.12
VPS13B-204ENST00000441350 ARL6IP6Q8N6S5 226 aa15.77■□□□□ 0.12
VPS13B-204ENST00000441350 OR4C46A6NHA9 309 aa15.76■□□□□ 0.11
VPS13B-204ENST00000441350 F6UZH7 168 aa15.76■□□□□ 0.11
VPS13B-204ENST00000441350 GUCA2BQ16661 112 aa15.76■□□□□ 0.11
VPS13B-204ENST00000441350 CMTM2Q8TAZ6 248 aa15.76■□□□□ 0.11
VPS13B-204ENST00000441350 C11orf52Q96A22 123 aa15.76■□□□□ 0.11
VPS13B-204ENST00000441350 TREM1Q9NP99 234 aa15.76■□□□□ 0.11
VPS13B-204ENST00000441350 ZNF705FA8MVS1 300 aaPredicted RBP15.76■□□□□ 0.11
VPS13B-204ENST00000441350 TMEM250H0YL14 139 aa15.76■□□□□ 0.11
VPS13B-204ENST00000441350 GNG5P63218 68 aa15.76■□□□□ 0.11
VPS13B-204ENST00000441350 PRR31Q5SQ13 230 aa15.76■□□□□ 0.11
VPS13B-204ENST00000441350 HIST1H2BAQ96A08 127 aa15.76■□□□□ 0.11
VPS13B-204ENST00000441350 PKD1L1Q8TDX9 2849 aa15.75■□□□□ 0.11
VPS13B-204ENST00000441350 SORL1Q92673 2214 aa15.75■□□□□ 0.11
VPS13B-204ENST00000441350 SCO2A0A1W2PP80 73 aa15.75■□□□□ 0.11
VPS13B-204ENST00000441350 TCRAP04437 139 aa15.75■□□□□ 0.11
VPS13B-204ENST00000441350 ZNF688P0C7X2 276 aa15.75■□□□□ 0.11
VPS13B-204ENST00000441350 SNRPD3P62318 126 aaKnown RBP15.75■□□□□ 0.11
VPS13B-204ENST00000441350 LINC00052Q96N35 136 aa15.75■□□□□ 0.11
VPS13B-204ENST00000441350 DIRC3C9JPN6 131 aa15.74■□□□□ 0.11
VPS13B-204ENST00000441350 PEX7O00628 323 aa15.74■□□□□ 0.11
VPS13B-204ENST00000441350 CSN1S1P47710 185 aa15.74■□□□□ 0.11
VPS13B-204ENST00000441350 CYB561D1Q8N8Q1 229 aa15.74■□□□□ 0.11
VPS13B-204ENST00000441350 ATG101Q9BSB4 218 aa15.74■□□□□ 0.11
VPS13B-204ENST00000441350 SLC35B3Q9H1N7 401 aa15.74■□□□□ 0.11
VPS13B-204ENST00000441350 CMYA5Q8N3K9 4069 aa15.74■□□□□ 0.11
VPS13B-204ENST00000441350 PRAC2D3DTV9 90 aa15.73■□□□□ 0.11
VPS13B-204ENST00000441350 BEAN1Q3B7T3 259 aa15.73■□□□□ 0.11
VPS13B-204ENST00000441350 C2CD4CQ8TF44 421 aa15.73■□□□□ 0.11
VPS13B-204ENST00000441350 RPUSD4Q96CM3 377 aaKnown RBP15.73■□□□□ 0.11
VPS13B-204ENST00000441350 PRB4P10163 310 aaPredicted RBP15.72■□□□□ 0.11
VPS13B-204ENST00000441350 PSMG4Q5JS54 123 aa15.72■□□□□ 0.11
VPS13B-204ENST00000441350 ZNF738Q8NE65 137 aa15.72■□□□□ 0.11
VPS13B-204ENST00000441350 CITED4Q96RK1 184 aa15.72■□□□□ 0.11
VPS13B-204ENST00000441350 GPR61Q9BZJ8 451 aa15.72■□□□□ 0.11
VPS13B-204ENST00000441350 RPH3ALQ9UNE2 315 aa15.72■□□□□ 0.11
VPS13B-204ENST00000441350 GOLT1AQ6ZVE7 132 aa15.71■□□□□ 0.11
VPS13B-204ENST00000441350 SERTM2A0A1B0GWG4 89 aa15.7■□□□□ 0.1
VPS13B-204ENST00000441350 LINC00479Q96M42 142 aa15.7■□□□□ 0.1
VPS13B-204ENST00000441350 DERL1Q9BUN8 251 aa15.7■□□□□ 0.1
VPS13B-204ENST00000441350 MAP6D1Q9H9H5 199 aa15.7■□□□□ 0.1
VPS13B-204ENST00000441350 KLF12Q9Y4X4 402 aa15.7■□□□□ 0.1
VPS13B-204ENST00000441350 IGKV2-40A0A087WW87 121 aaPredicted RBP15.69■□□□□ 0.1
VPS13B-204ENST00000441350 TMEM218A2RU14 115 aa15.69■□□□□ 0.1
VPS13B-204ENST00000441350 IGKV2D-40P01614 121 aaPredicted RBP15.69■□□□□ 0.1
VPS13B-204ENST00000441350 SFTA3P0C7M3 94 aa15.69■□□□□ 0.1
VPS13B-204ENST00000441350 DEFB131AP59861 70 aa15.69■□□□□ 0.1
VPS13B-204ENST00000441350 DEFB1P60022 68 aa15.69■□□□□ 0.1
VPS13B-204ENST00000441350 ODF3L2Q3SX64 289 aa15.69■□□□□ 0.1
VPS13B-204ENST00000441350 RBAKDNA6NC62 111 aa15.68■□□□□ 0.1
VPS13B-204ENST00000441350 IGLV2-11P01706 119 aa15.68■□□□□ 0.1
VPS13B-204ENST00000441350 AKR1C3P42330 323 aa15.68■□□□□ 0.1
VPS13B-204ENST00000441350 CEBPGP53567 150 aa15.68■□□□□ 0.1
VPS13B-204ENST00000441350 OXLD1Q5BKU9 147 aa15.68■□□□□ 0.1
VPS13B-204ENST00000441350 FAM110AQ9BQ89 295 aa15.68■□□□□ 0.1
VPS13B-204ENST00000441350 PARLQ9H300 379 aa15.68■□□□□ 0.1
VPS13B-204ENST00000441350 K7EQM0 130 aa15.68■□□□□ 0.1
VPS13B-204ENST00000441350 RPL35P42766 123 aaKnown RBP15.68■□□□□ 0.1
VPS13B-204ENST00000441350 CNN1P51911 297 aaKnown RBP15.68■□□□□ 0.1
VPS13B-204ENST00000441350 CMC4P56277 68 aaPredicted RBP15.68■□□□□ 0.1
VPS13B-204ENST00000441350 OR8A1Q8NGG7 326 aa15.68■□□□□ 0.1
VPS13B-204ENST00000441350 TRAV8-1A0A0A6YYK1 113 aa15.67■□□□□ 0.1
VPS13B-204ENST00000441350 TRAV34A0A0B4J273 112 aa15.67■□□□□ 0.1
VPS13B-204ENST00000441350 F6UB75 175 aa15.67■□□□□ 0.1
VPS13B-204ENST00000441350 TMEM183BQ1AE95 376 aa15.67■□□□□ 0.1
VPS13B-204ENST00000441350 SOHLH1Q5JUK2 328 aa15.67■□□□□ 0.1
VPS13B-204ENST00000441350 TMEM75Q8N9X5 138 aa15.67■□□□□ 0.1
VPS13B-204ENST00000441350 VGLL1Q99990 258 aa15.67■□□□□ 0.1
VPS13B-204ENST00000441350 S100A9P06702 114 aaKnown RBP15.66■□□□□ 0.1
VPS13B-204ENST00000441350 CD7P09564 240 aa15.66■□□□□ 0.1
VPS13B-204ENST00000441350 C9orf47Q6ZRZ4 202 aa15.66■□□□□ 0.1
VPS13B-204ENST00000441350 C19orf73Q9NVV2 129 aa15.66■□□□□ 0.1
VPS13B-204ENST00000441350 TRBV6-1A0A0K0K1D8 114 aa15.65■□□□□ 0.1
VPS13B-204ENST00000441350 ZNF705DP0CH99 300 aaPredicted RBP15.65■□□□□ 0.1
VPS13B-204ENST00000441350 ZNF705BP0CI00 300 aaPredicted RBP15.65■□□□□ 0.1
VPS13B-204ENST00000441350 GDF5OSQ5U4N7 250 aa15.65■□□□□ 0.1
VPS13B-204ENST00000441350 FOXI2Q6ZQN5 318 aa15.65■□□□□ 0.1
VPS13B-204ENST00000441350 FMC1Q96HJ9 113 aa15.65■□□□□ 0.1
VPS13B-204ENST00000441350 SGK494Q96LW2 274 aa15.65■□□□□ 0.1
VPS13B-204ENST00000441350 AGPAT4-IT1Q9H0P7 198 aa15.65■□□□□ 0.1
VPS13B-204ENST00000441350 SAV1Q9H4B6 383 aaPredicted RBP15.65■□□□□ 0.1
VPS13B-204ENST00000441350 A0A0J9YX75 114 aa15.65■□□□□ 0.1
VPS13B-204ENST00000441350 OR11H12B2RN74 326 aa15.65■□□□□ 0.1
VPS13B-204ENST00000441350 NPIPB6E9PJ23 425 aa15.65■□□□□ 0.1
VPS13B-204ENST00000441350 TAS2R60P59551 318 aa15.65■□□□□ 0.1
VPS13B-204ENST00000441350 ERCC8Q13216 396 aa15.65■□□□□ 0.1
VPS13B-204ENST00000441350 ZNF674Q2M3X9 581 aa15.65■□□□□ 0.1
VPS13B-204ENST00000441350 OR10J6PQ8NGY7 276 aa15.65■□□□□ 0.1
VPS13B-204ENST00000441350 SMIM7Q9BQ49 75 aa15.65■□□□□ 0.1
VPS13B-204ENST00000441350 TRBV20OR9-2A0A075B6H5 130 aa15.64■□□□□ 0.09
VPS13B-204ENST00000441350 FBLL1A6NHQ2 334 aaKnown RBP15.64■□□□□ 0.09
VPS13B-204ENST00000441350 ZNF727A8MUV8 499 aa15.64■□□□□ 0.09
VPS13B-204ENST00000441350 ADCYAP1P18509 176 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms