RNA–Protein interactions for RNA: ENST00000438066.1

SPEN-202, Transcript of spen family transcriptional repressor, humanhuman

TSL 3

Gene SPEN, Length 1,733 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-202ENST00000438066 NAV2Q8IVL1 2488 aa4.73□□□□□ -1.65
SPEN-202ENST00000438066 IGKV1D-37A0A075B6S9 117 aa4.73□□□□□ -1.65
SPEN-202ENST00000438066 A0A1W2PRD5 423 aa4.73□□□□□ -1.65
SPEN-202ENST00000438066 A0A1W2PRF3 423 aa4.73□□□□□ -1.65
SPEN-202ENST00000438066 A0A1W2PRM7 423 aa4.73□□□□□ -1.65
SPEN-202ENST00000438066 M0R036 132 aa4.73□□□□□ -1.65
SPEN-202ENST00000438066 CXorf1O96002 111 aa4.73□□□□□ -1.65
SPEN-202ENST00000438066 OR5G3P0C626 314 aa4.73□□□□□ -1.65
SPEN-202ENST00000438066 OR10J1P30954 320 aa4.73□□□□□ -1.65
SPEN-202ENST00000438066 HNRNPA3P51991 378 aaKnown RBP4.73□□□□□ -1.65
SPEN-202ENST00000438066 RHOBP62745 196 aa4.73□□□□□ -1.65
SPEN-202ENST00000438066 C5orf64Q2M2E5 130 aa4.73□□□□□ -1.65
SPEN-202ENST00000438066 SPATA31B1PQ5VZV4 182 aa4.73□□□□□ -1.65
SPEN-202ENST00000438066 SPNS3Q6ZMD2 512 aa4.73□□□□□ -1.65
SPEN-202ENST00000438066 OR2T10Q8NGZ9 312 aa4.73□□□□□ -1.65
SPEN-202ENST00000438066 OR51M1Q9H341 326 aa4.73□□□□□ -1.65
SPEN-202ENST00000438066 SMCO4Q9NRQ5 59 aa4.73□□□□□ -1.65
SPEN-202ENST00000438066 PUS1Q9Y606 427 aaKnown RBP eCLIP4.73□□□□□ -1.65
SPEN-202ENST00000438066 CSMD2Q7Z408 3487 aa4.73□□□□□ -1.65
SPEN-202ENST00000438066 CREBBPQ92793 2442 aa4.73□□□□□ -1.65
SPEN-202ENST00000438066 SVEP1Q4LDE5 3571 aa4.73□□□□□ -1.65
SPEN-202ENST00000438066 HELZ2Q9BYK8 2649 aaKnown RBP4.72□□□□□ -1.65
SPEN-202ENST00000438066 TRAV9-2A0A087WT02 112 aa4.72□□□□□ -1.65
SPEN-202ENST00000438066 A0A087WWC5 75 aa4.72□□□□□ -1.65
SPEN-202ENST00000438066 TCRBV4S1A1TA0A5B7 111 aa4.72□□□□□ -1.65
SPEN-202ENST00000438066 CORTO00230 105 aa4.72□□□□□ -1.65
SPEN-202ENST00000438066 GATA1P15976 413 aaPredicted RBP4.72□□□□□ -1.65
SPEN-202ENST00000438066 CD24P25063 80 aa4.72□□□□□ -1.65
SPEN-202ENST00000438066 GCHFRP30047 84 aa4.72□□□□□ -1.65
SPEN-202ENST00000438066 AKR1C3P42330 323 aa4.72□□□□□ -1.65
SPEN-202ENST00000438066 RND2P52198 227 aa4.72□□□□□ -1.65
SPEN-202ENST00000438066 CEBPGP53567 150 aa4.72□□□□□ -1.65
SPEN-202ENST00000438066 ATP5J2P56134 94 aa4.72□□□□□ -1.65
SPEN-202ENST00000438066 PAX8Q06710 450 aa4.72□□□□□ -1.65
SPEN-202ENST00000438066 RUSC1-AS1Q66K80 236 aa4.72□□□□□ -1.65
SPEN-202ENST00000438066 CYP2G1PQ6ZSU1 146 aa4.72□□□□□ -1.65
SPEN-202ENST00000438066 TVP23CQ96ET8 276 aa4.72□□□□□ -1.65
SPEN-202ENST00000438066 ACY3Q96HD9 319 aa4.72□□□□□ -1.65
SPEN-202ENST00000438066 MCRIP2Q9BUT9 160 aaKnown RBP4.72□□□□□ -1.65
SPEN-202ENST00000438066 C19orf24Q9BVV8 132 aa4.72□□□□□ -1.65
SPEN-202ENST00000438066 TUBA4BQ9H853 241 aa4.72□□□□□ -1.65
SPEN-202ENST00000438066 RPS10P5Q9NQ39 176 aa4.72□□□□□ -1.65
SPEN-202ENST00000438066 DHRS4-AS1Q9P1J3 65 aa4.72□□□□□ -1.65
SPEN-202ENST00000438066 FUT9Q9Y231 359 aa4.72□□□□□ -1.65
SPEN-202ENST00000438066 ARL2-SNX15V9GYD0 113 aa4.72□□□□□ -1.65
SPEN-202ENST00000438066 COLCA2A8K830 154 aa4.72□□□□□ -1.65
SPEN-202ENST00000438066 C11orf94C9JXX5 98 aa4.72□□□□□ -1.65
SPEN-202ENST00000438066 PDE6DO43924 150 aa4.72□□□□□ -1.65
SPEN-202ENST00000438066 APELAP0DMC3 54 aa4.72□□□□□ -1.65
SPEN-202ENST00000438066 CTRB1P17538 263 aa4.72□□□□□ -1.65
SPEN-202ENST00000438066 GATA2P23769 480 aaPredicted RBP4.72□□□□□ -1.65
SPEN-202ENST00000438066 SELENOTP62341 195 aa4.72□□□□□ -1.65
SPEN-202ENST00000438066 NDPQ00604 133 aa4.72□□□□□ -1.65
SPEN-202ENST00000438066 HES1Q14469 280 aa4.72□□□□□ -1.65
SPEN-202ENST00000438066 PLGLAQ15195 96 aa4.72□□□□□ -1.65
SPEN-202ENST00000438066 FAM78BQ5VT40 261 aa4.72□□□□□ -1.65
SPEN-202ENST00000438066 CTRB2Q6GPI1 263 aa4.72□□□□□ -1.65
SPEN-202ENST00000438066 MIR17HGQ75NE6 70 aa4.72□□□□□ -1.65
SPEN-202ENST00000438066 IQCF2Q8IXL9 164 aa4.72□□□□□ -1.65
SPEN-202ENST00000438066 OR9G4Q8NGQ1 327 aa4.72□□□□□ -1.65
SPEN-202ENST00000438066 MALSU1Q96EH3 234 aa4.72□□□□□ -1.65
SPEN-202ENST00000438066 YPEL4Q96NS1 127 aa4.72□□□□□ -1.65
SPEN-202ENST00000438066 SMIM7Q9BQ49 75 aa4.72□□□□□ -1.65
SPEN-202ENST00000438066 TXNDC17Q9BRA2 123 aa4.72□□□□□ -1.65
SPEN-202ENST00000438066 MRPL32Q9BYC8 188 aaKnown RBP4.72□□□□□ -1.65
SPEN-202ENST00000438066 CENPVL3A0A0U1RRI6 287 aa4.71□□□□□ -1.66
SPEN-202ENST00000438066 LOC105371267A0A1B0GV96 52 aa4.71□□□□□ -1.66
SPEN-202ENST00000438066 ZNF727A8MUV8 499 aa4.71□□□□□ -1.66
SPEN-202ENST00000438066 B4DEV8 164 aa4.71□□□□□ -1.66
SPEN-202ENST00000438066 I3L2K1 104 aa4.71□□□□□ -1.66
SPEN-202ENST00000438066 NPFFO15130 113 aa4.71□□□□□ -1.66
SPEN-202ENST00000438066 IGHV3-48P01763 117 aa4.71□□□□□ -1.66
SPEN-202ENST00000438066 NPPCP23582 126 aa4.71□□□□□ -1.66
SPEN-202ENST00000438066 ATP5G3P48201 142 aa4.71□□□□□ -1.66
SPEN-202ENST00000438066 ZNF90Q03938 601 aa4.71□□□□□ -1.66
SPEN-202ENST00000438066 FXYD3Q14802 87 aa4.71□□□□□ -1.66
SPEN-202ENST00000438066 NSUN5P1Q3KNT7 163 aa4.71□□□□□ -1.66
SPEN-202ENST00000438066 AKIRIN2Q53H80 203 aa4.71□□□□□ -1.66
SPEN-202ENST00000438066 VN1R17PQ8TDU5 208 aa4.71□□□□□ -1.66
SPEN-202ENST00000438066 HIST1H2BAQ96A08 127 aa4.71□□□□□ -1.66
SPEN-202ENST00000438066 FAM167A-AS1Q96KT0 104 aa4.71□□□□□ -1.66
SPEN-202ENST00000438066 TRGV9Q99603 122 aa4.71□□□□□ -1.66
SPEN-202ENST00000438066 YTHDF2Q9Y5A9 579 aaKnown RBP4.71□□□□□ -1.66
SPEN-202ENST00000438066 CSMD1Q96PZ7 3565 aa4.7□□□□□ -1.66
SPEN-202ENST00000438066 CSPG4Q6UVK1 2322 aa4.7□□□□□ -1.66
SPEN-202ENST00000438066 F6UZH7 168 aa4.7□□□□□ -1.66
SPEN-202ENST00000438066 K7EIM0 57 aa4.7□□□□□ -1.66
SPEN-202ENST00000438066 CNIH1O95406 144 aa4.7□□□□□ -1.66
SPEN-202ENST00000438066 MT-CO2P00403 227 aa4.7□□□□□ -1.66
SPEN-202ENST00000438066 HLA-DRB1P01911 266 aa4.7□□□□□ -1.66
SPEN-202ENST00000438066 FOLR2P14207 255 aa4.7□□□□□ -1.66
SPEN-202ENST00000438066 COX6B1P14854 86 aa4.7□□□□□ -1.66
SPEN-202ENST00000438066 UBE2G2P60604 165 aa4.7□□□□□ -1.66
SPEN-202ENST00000438066 RPL32P62910 135 aaKnown RBP4.7□□□□□ -1.66
SPEN-202ENST00000438066 PATE2Q6UY27 113 aa4.7□□□□□ -1.66
SPEN-202ENST00000438066 Q8N9W7 124 aa4.7□□□□□ -1.66
SPEN-202ENST00000438066 OR51G1Q8NGK1 321 aa4.7□□□□□ -1.66
SPEN-202ENST00000438066 C22orf15Q8WYQ4 148 aa4.7□□□□□ -1.66
SPEN-202ENST00000438066 ARPC1AQ92747 370 aa4.7□□□□□ -1.66
SPEN-202ENST00000438066 ISOC2Q96AB3 205 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 158.7 ms