RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 COL4A4P53420 1690 aaPredicted RBP12.8□□□□□ -0.36
PTPN13-204ENST00000436978 C14orf178Q8N769 122 aaPredicted RBP12.8□□□□□ -0.36
PTPN13-204ENST00000436978 OVOL3O00110 214 aa12.8□□□□□ -0.36
PTPN13-204ENST00000436978 LGALS1P09382 135 aaKnown RBP12.8□□□□□ -0.36
PTPN13-204ENST00000436978 C6orf226Q5I0X4 101 aa12.79□□□□□ -0.36
PTPN13-204ENST00000436978 IGHV3-53P01767 116 aa12.79□□□□□ -0.36
PTPN13-204ENST00000436978 NDUFA4O00483 81 aa12.79□□□□□ -0.36
PTPN13-204ENST00000436978 DERL1Q9BUN8 251 aa12.79□□□□□ -0.36
PTPN13-204ENST00000436978 A8MWV9 139 aa12.79□□□□□ -0.36
PTPN13-204ENST00000436978 SAMD5Q5TGI4 173 aa12.79□□□□□ -0.36
PTPN13-204ENST00000436978 HIST1H2BLQ99880 126 aa12.79□□□□□ -0.36
PTPN13-204ENST00000436978 IGLV1-44P01699 117 aa12.78□□□□□ -0.36
PTPN13-204ENST00000436978 NDUFAF3Q9BU61 184 aa12.78□□□□□ -0.36
PTPN13-204ENST00000436978 DMRTA1Q5VZB9 504 aa12.78□□□□□ -0.36
PTPN13-204ENST00000436978 FNDC4Q9H6D8 234 aaPredicted RBP12.78□□□□□ -0.36
PTPN13-204ENST00000436978 TIMM21Q9BVV7 248 aa12.78□□□□□ -0.36
PTPN13-204ENST00000436978 SRSF2Q01130 221 aaKnown RBP12.78□□□□□ -0.36
PTPN13-204ENST00000436978 GATD1Q8NB37 220 aa12.78□□□□□ -0.36
PTPN13-204ENST00000436978 DAD1P61803 113 aa12.78□□□□□ -0.36
PTPN13-204ENST00000436978 C21orf62-AS1Q17RA5 79 aa12.78□□□□□ -0.36
PTPN13-204ENST00000436978 LIME1Q9H400 295 aa12.77□□□□□ -0.36
PTPN13-204ENST00000436978 CT83Q5H943 113 aa12.77□□□□□ -0.36
PTPN13-204ENST00000436978 SELENOKQ9Y6D0 94 aa12.77□□□□□ -0.37
PTPN13-204ENST00000436978 PFN1P07737 140 aaKnown RBP12.77□□□□□ -0.37
PTPN13-204ENST00000436978 DEFB131AP59861 70 aa12.77□□□□□ -0.37
PTPN13-204ENST00000436978 ARHGAP21Q5T5U3 1957 aa12.77□□□□□ -0.37
PTPN13-204ENST00000436978 ZNF492Q9P255 531 aa12.77□□□□□ -0.37
PTPN13-204ENST00000436978 H3BUA1 57 aa12.76□□□□□ -0.37
PTPN13-204ENST00000436978 FHL1Q13642 323 aa12.76□□□□□ -0.37
PTPN13-204ENST00000436978 C1orf159Q96HA4 380 aa12.76□□□□□ -0.37
PTPN13-204ENST00000436978 TMEM141Q96I45 108 aa12.76□□□□□ -0.37
PTPN13-204ENST00000436978 TRBV25-1A0A075B6N4 114 aa12.76□□□□□ -0.37
PTPN13-204ENST00000436978 ZNF479Q96JC4 524 aa12.76□□□□□ -0.37
PTPN13-204ENST00000436978 C17orf58Q2M2W7 97 aa12.76□□□□□ -0.37
PTPN13-204ENST00000436978 LY6G5BQ8NDX9 201 aa12.76□□□□□ -0.37
PTPN13-204ENST00000436978 PROK2Q9HC23 129 aa12.76□□□□□ -0.37
PTPN13-204ENST00000436978 CXCL1P09341 107 aa12.76□□□□□ -0.37
PTPN13-204ENST00000436978 HIST3H2BBQ8N257 126 aa12.76□□□□□ -0.37
PTPN13-204ENST00000436978 FAM231BA6NCW3 169 aa12.75□□□□□ -0.37
PTPN13-204ENST00000436978 TMEM158Q8WZ71 300 aa12.75□□□□□ -0.37
PTPN13-204ENST00000436978 GAGE13Q4V321 117 aa12.75□□□□□ -0.37
PTPN13-204ENST00000436978 EREGO14944 169 aa12.75□□□□□ -0.37
PTPN13-204ENST00000436978 DEFB130BP0DP73 79 aa12.75□□□□□ -0.37
PTPN13-204ENST00000436978 DEFB130AP0DP74 79 aa12.75□□□□□ -0.37
PTPN13-204ENST00000436978 A0A087WWL8 130 aa12.75□□□□□ -0.37
PTPN13-204ENST00000436978 I3L3M4 83 aa12.75□□□□□ -0.37
PTPN13-204ENST00000436978 DNAJC30Q96LL9 226 aa12.75□□□□□ -0.37
PTPN13-204ENST00000436978 TRAV8-1A0A0A6YYK1 113 aa12.75□□□□□ -0.37
PTPN13-204ENST00000436978 IGF2-ASQ6U949 168 aa12.75□□□□□ -0.37
PTPN13-204ENST00000436978 TMEM14CQ9P0S9 112 aa12.75□□□□□ -0.37
PTPN13-204ENST00000436978 PRSS46E5RG02 174 aa12.74□□□□□ -0.37
PTPN13-204ENST00000436978 RMI2Q96E14 147 aa12.74□□□□□ -0.37
PTPN13-204ENST00000436978 KLF12Q9Y4X4 402 aa12.74□□□□□ -0.37
PTPN13-204ENST00000436978 SPTAN1Q13813 2472 aaKnown RBP12.74□□□□□ -0.37
PTPN13-204ENST00000436978 LAMTOR3Q9UHA4 124 aa12.74□□□□□ -0.37
PTPN13-204ENST00000436978 ZNF581Q9P0T4 197 aa12.74□□□□□ -0.37
PTPN13-204ENST00000436978 CR1LQ2VPA4 569 aa12.73□□□□□ -0.37
PTPN13-204ENST00000436978 C8orf31Q8N9H6 132 aa12.73□□□□□ -0.37
PTPN13-204ENST00000436978 A0A0U1RRA0 63 aa12.73□□□□□ -0.37
PTPN13-204ENST00000436978 LOC105371267A0A1B0GV96 52 aa12.73□□□□□ -0.37
PTPN13-204ENST00000436978 NPC2P61916 151 aa12.73□□□□□ -0.37
PTPN13-204ENST00000436978 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.73□□□□□ -0.37
PTPN13-204ENST00000436978 MED13Q9UHV7 2174 aa12.73□□□□□ -0.37
PTPN13-204ENST00000436978 AZU1P20160 251 aa12.73□□□□□ -0.37
PTPN13-204ENST00000436978 C8orf86Q6ZUL3 223 aa12.73□□□□□ -0.37
PTPN13-204ENST00000436978 RNF144BQ7Z419 303 aa12.73□□□□□ -0.37
PTPN13-204ENST00000436978 ANAPC10Q9UM13 185 aa12.73□□□□□ -0.37
PTPN13-204ENST00000436978 CDKN1BP46527 198 aa12.73□□□□□ -0.37
PTPN13-204ENST00000436978 KAAG1Q9UBP8 84 aa12.73□□□□□ -0.37
PTPN13-204ENST00000436978 F5H768 121 aa12.72□□□□□ -0.37
PTPN13-204ENST00000436978 SYS1-DBNDD2H3BUS1 97 aa12.72□□□□□ -0.37
PTPN13-204ENST00000436978 HS3ST6Q96QI5 342 aa12.72□□□□□ -0.37
PTPN13-204ENST00000436978 ZNF561-AS1K7EIQ3 104 aa12.72□□□□□ -0.37
PTPN13-204ENST00000436978 RIPPLY3P57055 190 aa12.72□□□□□ -0.37
PTPN13-204ENST00000436978 LINC00205P59089 165 aa12.72□□□□□ -0.37
PTPN13-204ENST00000436978 TCTEX1D4Q5JR98 221 aa12.72□□□□□ -0.37
PTPN13-204ENST00000436978 C1orf122Q6ZSJ8 110 aa12.72□□□□□ -0.37
PTPN13-204ENST00000436978 SHANK1Q9Y566 2161 aa12.72□□□□□ -0.37
PTPN13-204ENST00000436978 ZMAT4Q9H898 229 aa12.72□□□□□ -0.37
PTPN13-204ENST00000436978 TSSC4Q9Y5U2 329 aaPredicted RBP12.72□□□□□ -0.37
PTPN13-204ENST00000436978 GUSBP1Q15486 140 aa12.72□□□□□ -0.37
PTPN13-204ENST00000436978 MST1LQ2TV78 715 aa12.72□□□□□ -0.37
PTPN13-204ENST00000436978 ALPK3Q96L96 1907 aa12.72□□□□□ -0.37
PTPN13-204ENST00000436978 COLCA2A8K830 154 aa12.72□□□□□ -0.37
PTPN13-204ENST00000436978 REG4Q9BYZ8 158 aa12.72□□□□□ -0.37
PTPN13-204ENST00000436978 IGLV3-9A0A075B6K5 115 aa12.71□□□□□ -0.37
PTPN13-204ENST00000436978 DKK1O94907 266 aa12.71□□□□□ -0.37
PTPN13-204ENST00000436978 SFTA2Q6UW10 78 aa12.71□□□□□ -0.37
PTPN13-204ENST00000436978 A0A0G2JRQ6 117 aa12.71□□□□□ -0.37
PTPN13-204ENST00000436978 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.71□□□□□ -0.37
PTPN13-204ENST00000436978 ESDP10768 282 aa12.71□□□□□ -0.37
PTPN13-204ENST00000436978 ARMS2P0C7Q2 107 aa12.71□□□□□ -0.37
PTPN13-204ENST00000436978 HOXB4P17483 251 aaPredicted RBP12.71□□□□□ -0.37
PTPN13-204ENST00000436978 TNFRSF6BO95407 300 aa12.71□□□□□ -0.38
PTPN13-204ENST00000436978 LOXP28300 417 aaPredicted RBP12.71□□□□□ -0.38
PTPN13-204ENST00000436978 Q6ZR03 302 aa12.71□□□□□ -0.38
PTPN13-204ENST00000436978 AMN1Q8IY45 258 aa12.71□□□□□ -0.38
PTPN13-204ENST00000436978 TRAV13-1A0A0B4J241 112 aa12.71□□□□□ -0.38
PTPN13-204ENST00000436978 TRBV19A0A075B6N1 114 aa12.71□□□□□ -0.38
PTPN13-204ENST00000436978 H3BRN7 92 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms