RNA–Protein interactions for RNA: ENST00000435953.2

AC004448.3-201, humanhuman

TSL 2 BASIC

Gene AC004448.3, Length 543 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004448.3-201ENST00000435953 NDUFS6O75380 124 aaKnown RBP7.39□□□□□ -1.23
AC004448.3-201ENST00000435953 SLC25A5P05141 298 aaKnown RBP7.39□□□□□ -1.23
AC004448.3-201ENST00000435953 CSN1S1P47710 185 aa7.39□□□□□ -1.23
AC004448.3-201ENST00000435953 CMC4P56277 68 aaPredicted RBP7.39□□□□□ -1.23
AC004448.3-201ENST00000435953 SNRPD3P62318 126 aaKnown RBP7.39□□□□□ -1.23
AC004448.3-201ENST00000435953 NDUFA5Q16718 116 aa7.39□□□□□ -1.23
AC004448.3-201ENST00000435953 BEAN1Q3B7T3 259 aa7.39□□□□□ -1.23
AC004448.3-201ENST00000435953 COMMD7Q86VX2 200 aa7.39□□□□□ -1.23
AC004448.3-201ENST00000435953 SLC7A5P1Q8MH63 180 aa7.39□□□□□ -1.23
AC004448.3-201ENST00000435953 FAM24BQ8N5W8 94 aa7.39□□□□□ -1.23
AC004448.3-201ENST00000435953 EIF4E3Q8N5X7 224 aaKnown RBP7.39□□□□□ -1.23
AC004448.3-201ENST00000435953 RNF182Q8N6D2 247 aa7.39□□□□□ -1.23
AC004448.3-201ENST00000435953 C5orf17Q8NAS9 161 aa7.39□□□□□ -1.23
AC004448.3-201ENST00000435953 CMTM2Q8TAZ6 248 aa7.39□□□□□ -1.23
AC004448.3-201ENST00000435953 MRPL53Q96EL3 112 aaKnown RBP7.39□□□□□ -1.23
AC004448.3-201ENST00000435953 GPR61Q9BZJ8 451 aa7.39□□□□□ -1.23
AC004448.3-201ENST00000435953 CMYA5Q8N3K9 4069 aa7.38□□□□□ -1.23
AC004448.3-201ENST00000435953 F6UZH7 168 aa7.38□□□□□ -1.23
AC004448.3-201ENST00000435953 SRP19P09132 144 aaKnown RBP7.38□□□□□ -1.23
AC004448.3-201ENST00000435953 UQCC3Q6UW78 93 aa7.38□□□□□ -1.23
AC004448.3-201ENST00000435953 HIST1H2BAQ96A08 127 aa7.38□□□□□ -1.23
AC004448.3-201ENST00000435953 RPUSD4Q96CM3 377 aaKnown RBP7.38□□□□□ -1.23
AC004448.3-201ENST00000435953 TCEAL7Q9BRU2 100 aa7.38□□□□□ -1.23
AC004448.3-201ENST00000435953 TREM1Q9NP99 234 aa7.38□□□□□ -1.23
AC004448.3-201ENST00000435953 DIRC3C9JPN6 131 aa7.37□□□□□ -1.23
AC004448.3-201ENST00000435953 PRAC2D3DTV9 90 aa7.37□□□□□ -1.23
AC004448.3-201ENST00000435953 TMEM250H0YL14 139 aa7.37□□□□□ -1.23
AC004448.3-201ENST00000435953 TCRAP04437 139 aa7.37□□□□□ -1.23
AC004448.3-201ENST00000435953 ZNF688P0C7X2 276 aa7.37□□□□□ -1.23
AC004448.3-201ENST00000435953 GNG5P63218 68 aa7.37□□□□□ -1.23
AC004448.3-201ENST00000435953 OXLD1Q5BKU9 147 aa7.37□□□□□ -1.23
AC004448.3-201ENST00000435953 PSMG4Q5JS54 123 aa7.37□□□□□ -1.23
AC004448.3-201ENST00000435953 ZNF738Q8NE65 137 aa7.37□□□□□ -1.23
AC004448.3-201ENST00000435953 SLC35B3Q9H1N7 401 aa7.37□□□□□ -1.23
AC004448.3-201ENST00000435953 DNHD1Q96M86 4753 aa7.36□□□□□ -1.23
AC004448.3-201ENST00000435953 SCO2A0A1W2PP80 73 aa7.36□□□□□ -1.23
AC004448.3-201ENST00000435953 PEX7O00628 323 aa7.36□□□□□ -1.23
AC004448.3-201ENST00000435953 PRB4P10163 310 aaPredicted RBP7.36□□□□□ -1.23
AC004448.3-201ENST00000435953 DEFB131AP59861 70 aa7.36□□□□□ -1.23
AC004448.3-201ENST00000435953 GOLT1AQ6ZVE7 132 aa7.36□□□□□ -1.23
AC004448.3-201ENST00000435953 C11orf52Q96A22 123 aa7.36□□□□□ -1.23
AC004448.3-201ENST00000435953 LINC00479Q96M42 142 aa7.36□□□□□ -1.23
AC004448.3-201ENST00000435953 ATG101Q9BSB4 218 aa7.36□□□□□ -1.23
AC004448.3-201ENST00000435953 KLF12Q9Y4X4 402 aa7.36□□□□□ -1.23
AC004448.3-201ENST00000435953 SERTM2A0A1B0GWG4 89 aa7.35□□□□□ -1.23
AC004448.3-201ENST00000435953 TMEM218A2RU14 115 aa7.35□□□□□ -1.23
AC004448.3-201ENST00000435953 K7EQM0 130 aa7.35□□□□□ -1.23
AC004448.3-201ENST00000435953 S100A9P06702 114 aaKnown RBP7.35□□□□□ -1.23
AC004448.3-201ENST00000435953 CD7P09564 240 aa7.35□□□□□ -1.23
AC004448.3-201ENST00000435953 DEFB1P60022 68 aa7.35□□□□□ -1.23
AC004448.3-201ENST00000435953 CYB561D1Q8N8Q1 229 aa7.35□□□□□ -1.23
AC004448.3-201ENST00000435953 C2CD4CQ8TF44 421 aa7.35□□□□□ -1.23
AC004448.3-201ENST00000435953 CITED4Q96RK1 184 aa7.35□□□□□ -1.23
AC004448.3-201ENST00000435953 FAM110AQ9BQ89 295 aa7.35□□□□□ -1.23
AC004448.3-201ENST00000435953 AGPAT4-IT1Q9H0P7 198 aa7.35□□□□□ -1.23
AC004448.3-201ENST00000435953 MAP6D1Q9H9H5 199 aa7.35□□□□□ -1.23
AC004448.3-201ENST00000435953 ZMAT5Q9UDW3 170 aaKnown RBP7.35□□□□□ -1.23
AC004448.3-201ENST00000435953 RPH3ALQ9UNE2 315 aa7.35□□□□□ -1.23
AC004448.3-201ENST00000435953 NOTCH3Q9UM47 2321 aa7.35□□□□□ -1.23
AC004448.3-201ENST00000435953 IGKV2-40A0A087WW87 121 aaPredicted RBP7.34□□□□□ -1.23
AC004448.3-201ENST00000435953 TRAV34A0A0B4J273 112 aa7.34□□□□□ -1.23
AC004448.3-201ENST00000435953 A0A0J9YX75 114 aa7.34□□□□□ -1.23
AC004448.3-201ENST00000435953 RBAKDNA6NC62 111 aa7.34□□□□□ -1.23
AC004448.3-201ENST00000435953 OR11H12B2RN74 326 aa7.34□□□□□ -1.23
AC004448.3-201ENST00000435953 F6UB75 175 aa7.34□□□□□ -1.23
AC004448.3-201ENST00000435953 IGKV2D-40P01614 121 aaPredicted RBP7.34□□□□□ -1.23
AC004448.3-201ENST00000435953 ZNF705DP0CH99 300 aaPredicted RBP7.34□□□□□ -1.23
AC004448.3-201ENST00000435953 ZNF705BP0CI00 300 aaPredicted RBP7.34□□□□□ -1.23
AC004448.3-201ENST00000435953 AKR1C3P42330 323 aa7.34□□□□□ -1.23
AC004448.3-201ENST00000435953 CEBPGP53567 150 aa7.34□□□□□ -1.23
AC004448.3-201ENST00000435953 TAS2R60P59551 318 aa7.34□□□□□ -1.23
AC004448.3-201ENST00000435953 EGFEM1PQ0D2K5 195 aa7.34□□□□□ -1.23
AC004448.3-201ENST00000435953 ERCC8Q13216 396 aa7.34□□□□□ -1.23
AC004448.3-201ENST00000435953 TMEM183BQ1AE95 376 aa7.34□□□□□ -1.23
AC004448.3-201ENST00000435953 ODF3L2Q3SX64 289 aa7.34□□□□□ -1.23
AC004448.3-201ENST00000435953 SOHLH1Q5JUK2 328 aa7.34□□□□□ -1.23
AC004448.3-201ENST00000435953 EBLN2Q6P2I7 272 aa7.34□□□□□ -1.23
AC004448.3-201ENST00000435953 FOXI2Q6ZQN5 318 aa7.34□□□□□ -1.23
AC004448.3-201ENST00000435953 C9orf47Q6ZRZ4 202 aa7.34□□□□□ -1.23
AC004448.3-201ENST00000435953 APRG1Q8IVJ8 170 aa7.34□□□□□ -1.23
AC004448.3-201ENST00000435953 OR8A1Q8NGG7 326 aa7.34□□□□□ -1.23
AC004448.3-201ENST00000435953 OR10J6PQ8NGY7 276 aa7.34□□□□□ -1.23
AC004448.3-201ENST00000435953 LINC00477Q96M19 166 aa7.34□□□□□ -1.23
AC004448.3-201ENST00000435953 VGLL1Q99990 258 aa7.34□□□□□ -1.23
AC004448.3-201ENST00000435953 C19orf73Q9NVV2 129 aa7.34□□□□□ -1.23
AC004448.3-201ENST00000435953 TRAV8-1A0A0A6YYK1 113 aa7.33□□□□□ -1.24
AC004448.3-201ENST00000435953 TRBV6-1A0A0K0K1D8 114 aa7.33□□□□□ -1.24
AC004448.3-201ENST00000435953 FBLL1A6NHQ2 334 aaKnown RBP7.33□□□□□ -1.24
AC004448.3-201ENST00000435953 KNCNA6PVL3 124 aa7.33□□□□□ -1.24
AC004448.3-201ENST00000435953 NPIPB6E9PJ23 425 aa7.33□□□□□ -1.24
AC004448.3-201ENST00000435953 G3V4G9 280 aa7.33□□□□□ -1.24
AC004448.3-201ENST00000435953 DUSP14O95147 198 aaKnown RBP7.33□□□□□ -1.24
AC004448.3-201ENST00000435953 IGLV2-11P01706 119 aa7.33□□□□□ -1.24
AC004448.3-201ENST00000435953 SFTA3P0C7M3 94 aa7.33□□□□□ -1.24
AC004448.3-201ENST00000435953 RPL35P42766 123 aaKnown RBP7.33□□□□□ -1.24
AC004448.3-201ENST00000435953 CNN1P51911 297 aaKnown RBP7.33□□□□□ -1.24
AC004448.3-201ENST00000435953 KRTAP10-11P60412 298 aa7.33□□□□□ -1.24
AC004448.3-201ENST00000435953 FAM74A3Q4VXF1 159 aa7.33□□□□□ -1.24
AC004448.3-201ENST00000435953 SAMD5Q5TGI4 173 aa7.33□□□□□ -1.24
AC004448.3-201ENST00000435953 GDF5OSQ5U4N7 250 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms