RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 PRDX2P32119 198 aa5.99□□□□□ -1.45
CPSF6-202ENST00000435070 AMN1Q8IY45 258 aa5.99□□□□□ -1.45
CPSF6-202ENST00000435070 GLMPQ8WWB7 406 aa5.99□□□□□ -1.45
CPSF6-202ENST00000435070 METTL26Q96S19 204 aa5.99□□□□□ -1.45
CPSF6-202ENST00000435070 SIGLEC8Q9NYZ4 499 aa5.99□□□□□ -1.45
CPSF6-202ENST00000435070 MRPL36Q9P0J6 103 aaKnown RBP5.99□□□□□ -1.45
CPSF6-202ENST00000435070 TRAV41A0A0B4J266 112 aa5.99□□□□□ -1.45
CPSF6-202ENST00000435070 PEAR1Q5VY43 1037 aaPredicted RBP5.99□□□□□ -1.45
CPSF6-202ENST00000435070 SHISA2Q6UWI4 295 aa5.99□□□□□ -1.45
CPSF6-202ENST00000435070 EXOC3-AS1Q8N2X6 119 aa5.99□□□□□ -1.45
CPSF6-202ENST00000435070 C16orf92Q96LL3 132 aa5.99□□□□□ -1.45
CPSF6-202ENST00000435070 RPL32P62910 135 aaKnown RBP5.99□□□□□ -1.45
CPSF6-202ENST00000435070 MBNL2Q5VZF2 373 aaKnown RBP5.99□□□□□ -1.45
CPSF6-202ENST00000435070 APOMO95445 188 aa5.99□□□□□ -1.45
CPSF6-202ENST00000435070 MRPL32Q9BYC8 188 aaKnown RBP5.99□□□□□ -1.45
CPSF6-202ENST00000435070 FOXA2Q9Y261 457 aaPredicted RBP5.99□□□□□ -1.45
CPSF6-202ENST00000435070 TRBV7-9A0A0J9YWB2 115 aa5.99□□□□□ -1.45
CPSF6-202ENST00000435070 TMEM213A2RRL7 107 aa5.99□□□□□ -1.45
CPSF6-202ENST00000435070 C16orf97H3BN30 126 aa5.99□□□□□ -1.45
CPSF6-202ENST00000435070 RNASE2P10153 161 aaKnown RBP5.99□□□□□ -1.45
CPSF6-202ENST00000435070 SPATA25Q9BR10 227 aa5.99□□□□□ -1.45
CPSF6-202ENST00000435070 WDFY4Q6ZS81 3184 aa5.98□□□□□ -1.45
CPSF6-202ENST00000435070 C8orf86Q6ZUL3 223 aa5.98□□□□□ -1.45
CPSF6-202ENST00000435070 C11orf53Q8IXP5 236 aa5.98□□□□□ -1.45
CPSF6-202ENST00000435070 RPRMLQ8N4K4 120 aa5.98□□□□□ -1.45
CPSF6-202ENST00000435070 IGLL5B9A064 214 aa5.98□□□□□ -1.45
CPSF6-202ENST00000435070 E7EUB6 86 aa5.98□□□□□ -1.45
CPSF6-202ENST00000435070 PMVKQ15126 192 aa5.98□□□□□ -1.45
CPSF6-202ENST00000435070 SPANXN1Q5VSR9 72 aa5.98□□□□□ -1.45
CPSF6-202ENST00000435070 KLF14Q8TD94 323 aaPredicted RBP5.98□□□□□ -1.45
CPSF6-202ENST00000435070 PTH2Q96A98 100 aa5.98□□□□□ -1.45
CPSF6-202ENST00000435070 PRSS22Q9GZN4 317 aa5.98□□□□□ -1.45
CPSF6-202ENST00000435070 PRNDQ9UKY0 176 aa5.98□□□□□ -1.45
CPSF6-202ENST00000435070 FOXI2Q6ZQN5 318 aa5.98□□□□□ -1.45
CPSF6-202ENST00000435070 Q9H3A6 140 aa5.98□□□□□ -1.45
CPSF6-202ENST00000435070 F8W1H4 67 aa5.98□□□□□ -1.45
CPSF6-202ENST00000435070 HCP5Q6MZN7 132 aa5.98□□□□□ -1.45
CPSF6-202ENST00000435070 MLST8Q9BVC4 326 aa5.98□□□□□ -1.45
CPSF6-202ENST00000435070 FAM90A9PA6NNJ1 464 aa5.98□□□□□ -1.45
CPSF6-202ENST00000435070 TNFRSF6BO95407 300 aa5.98□□□□□ -1.45
CPSF6-202ENST00000435070 PRCDQ00LT1 54 aa5.98□□□□□ -1.45
CPSF6-202ENST00000435070 LGALS9BQ3B8N2 356 aa5.98□□□□□ -1.45
CPSF6-202ENST00000435070 LGALS9CQ6DKI2 356 aa5.98□□□□□ -1.45
CPSF6-202ENST00000435070 OR10J6PQ8NGY7 276 aa5.98□□□□□ -1.45
CPSF6-202ENST00000435070 C19orf71A6NCJ1 209 aa5.97□□□□□ -1.45
CPSF6-202ENST00000435070 TCRAP04437 139 aa5.97□□□□□ -1.45
CPSF6-202ENST00000435070 TCTEX1D4Q5JR98 221 aa5.97□□□□□ -1.45
CPSF6-202ENST00000435070 TRBV25-1A0A075B6N4 114 aa5.97□□□□□ -1.45
CPSF6-202ENST00000435070 DLL1O00548 723 aa5.97□□□□□ -1.45
CPSF6-202ENST00000435070 OSR1Q8TAX0 266 aaPredicted RBP5.97□□□□□ -1.45
CPSF6-202ENST00000435070 HARBI1Q96MB7 349 aa5.97□□□□□ -1.45
CPSF6-202ENST00000435070 MED13Q9UHV7 2174 aa5.97□□□□□ -1.45
CPSF6-202ENST00000435070 SLC25A20O43772 301 aa5.97□□□□□ -1.45
CPSF6-202ENST00000435070 TMEM160Q9NX00 188 aa5.97□□□□□ -1.45
CPSF6-202ENST00000435070 CALYQ9NYX4 217 aa5.97□□□□□ -1.45
CPSF6-202ENST00000435070 HIGD1AQ9Y241 93 aa5.97□□□□□ -1.45
CPSF6-202ENST00000435070 A0A1W2PRX2 142 aa5.97□□□□□ -1.45
CPSF6-202ENST00000435070 TTC9CQ8N5M4 171 aa5.97□□□□□ -1.45
CPSF6-202ENST00000435070 DDB2Q92466 427 aa5.97□□□□□ -1.45
CPSF6-202ENST00000435070 IGHV3-72A0A0B4J1Y9 119 aa5.97□□□□□ -1.45
CPSF6-202ENST00000435070 UPK2O00526 184 aa5.97□□□□□ -1.45
CPSF6-202ENST00000435070 NDUFS7O75251 213 aa5.97□□□□□ -1.45
CPSF6-202ENST00000435070 IGHV4-39P01824 125 aa5.97□□□□□ -1.45
CPSF6-202ENST00000435070 HBDP02042 147 aa5.97□□□□□ -1.45
CPSF6-202ENST00000435070 SAA1P0DJI8 122 aaPredicted RBP5.97□□□□□ -1.45
CPSF6-202ENST00000435070 ZC2HC1BQ5TFG8 222 aa5.97□□□□□ -1.45
CPSF6-202ENST00000435070 TTTY12Q9BZ98 90 aa5.97□□□□□ -1.45
CPSF6-202ENST00000435070 PSG8Q9UQ74 426 aa5.97□□□□□ -1.45
CPSF6-202ENST00000435070 COLQQ9Y215 455 aaPredicted RBP5.97□□□□□ -1.45
CPSF6-202ENST00000435070 IGLV3-19P01714 112 aa5.96□□□□□ -1.45
CPSF6-202ENST00000435070 GCSAMQ8N6F7 178 aa5.96□□□□□ -1.45
CPSF6-202ENST00000435070 JPT1Q9UK76 154 aa5.96□□□□□ -1.45
CPSF6-202ENST00000435070 PTPRBP23467 1997 aa5.96□□□□□ -1.45
CPSF6-202ENST00000435070 RBMY1BA6NDE4 496 aaKnown RBP5.96□□□□□ -1.45
CPSF6-202ENST00000435070 RBMY1EA6NEQ0 496 aaKnown RBP5.96□□□□□ -1.45
CPSF6-202ENST00000435070 RBMY1DP0C7P1 496 aaKnown RBP5.96□□□□□ -1.45
CPSF6-202ENST00000435070 RBMY1A1P0DJD3 496 aaKnown RBP5.96□□□□□ -1.45
CPSF6-202ENST00000435070 RBMY1CP0DJD4 496 aa5.96□□□□□ -1.45
CPSF6-202ENST00000435070 UCNP55089 124 aa5.96□□□□□ -1.45
CPSF6-202ENST00000435070 HERV-K104P63124 156 aa5.96□□□□□ -1.45
CPSF6-202ENST00000435070 TMEM155Q4W5P6 130 aa5.96□□□□□ -1.45
CPSF6-202ENST00000435070 RUSC1-AS1Q66K80 236 aa5.96□□□□□ -1.45
CPSF6-202ENST00000435070 DUX4L9Q6RFH8 374 aaPredicted RBP5.96□□□□□ -1.45
CPSF6-202ENST00000435070 RBM3P98179 157 aaKnown RBP5.96□□□□□ -1.46
CPSF6-202ENST00000435070 CKS2P33552 79 aa5.96□□□□□ -1.46
CPSF6-202ENST00000435070 XGP55808 180 aa5.96□□□□□ -1.46
CPSF6-202ENST00000435070 Q0VFX4 171 aa5.96□□□□□ -1.46
CPSF6-202ENST00000435070 BAALCQ8WXS3 180 aa5.96□□□□□ -1.46
CPSF6-202ENST00000435070 E9PLD3 99 aa5.96□□□□□ -1.46
CPSF6-202ENST00000435070 SIVA1O15304 175 aa5.96□□□□□ -1.46
CPSF6-202ENST00000435070 EEF1AKMT3Q96AZ1 226 aa5.96□□□□□ -1.46
CPSF6-202ENST00000435070 CFAP47Q6ZTR5 3102 aa5.96□□□□□ -1.46
CPSF6-202ENST00000435070 PRSS29PA6NIE9 313 aa5.95□□□□□ -1.46
CPSF6-202ENST00000435070 C12orf74Q32Q52 190 aa5.95□□□□□ -1.46
CPSF6-202ENST00000435070 C2orf83Q53S99 150 aa5.95□□□□□ -1.46
CPSF6-202ENST00000435070 RAX2Q96IS3 184 aa5.95□□□□□ -1.46
CPSF6-202ENST00000435070 CCL13Q99616 98 aa5.95□□□□□ -1.46
CPSF6-202ENST00000435070 C10orf142B7Z368 130 aa5.95□□□□□ -1.46
CPSF6-202ENST00000435070 ATP5J2P56134 94 aa5.95□□□□□ -1.46
CPSF6-202ENST00000435070 FAM90A1Q86YD7 464 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms