RNA–Protein interactions for RNA: ENST00000429416.7

SMARCA4-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2 BASIC

Gene SMARCA4, Length 5,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-203ENST00000429416 GAGE7O76087 117 aa13.55□□□□□ -0.24
SMARCA4-203ENST00000429416 GAGE12FP0CL80 117 aa13.55□□□□□ -0.24
SMARCA4-203ENST00000429416 GAGE12GP0CL81 117 aa13.55□□□□□ -0.24
SMARCA4-203ENST00000429416 GAGE12IP0CL82 117 aa13.55□□□□□ -0.24
SMARCA4-203ENST00000429416 C14orf178Q8N769 122 aaPredicted RBP13.55□□□□□ -0.24
SMARCA4-203ENST00000429416 FOSL1P15407 271 aa13.55□□□□□ -0.24
SMARCA4-203ENST00000429416 PHLDA1Q8WV24 401 aaPredicted RBP13.55□□□□□ -0.24
SMARCA4-203ENST00000429416 CFPP27918 469 aa13.54□□□□□ -0.24
SMARCA4-203ENST00000429416 COPS9Q8WXC6 57 aa13.54□□□□□ -0.24
SMARCA4-203ENST00000429416 JMJD1CQ15652 2540 aa13.54□□□□□ -0.24
SMARCA4-203ENST00000429416 DOCK11Q5JSL3 2073 aa13.54□□□□□ -0.24
SMARCA4-203ENST00000429416 H3BUA1 57 aa13.54□□□□□ -0.24
SMARCA4-203ENST00000429416 PAX9P55771 341 aa13.54□□□□□ -0.24
SMARCA4-203ENST00000429416 FOXE3Q13461 319 aa13.54□□□□□ -0.24
SMARCA4-203ENST00000429416 IGKV1-39P01597 117 aa13.54□□□□□ -0.24
SMARCA4-203ENST00000429416 IGKV1D-39P04432 117 aa13.54□□□□□ -0.24
SMARCA4-203ENST00000429416 TTC9CQ8N5M4 171 aa13.54□□□□□ -0.24
SMARCA4-203ENST00000429416 CLPSL1A2RUU4 121 aa13.54□□□□□ -0.24
SMARCA4-203ENST00000429416 C11orf68Q9H3H3 251 aaKnown RBP13.54□□□□□ -0.24
SMARCA4-203ENST00000429416 CYSLTR1Q9Y271 337 aa13.54□□□□□ -0.24
SMARCA4-203ENST00000429416 TMEM238LA0A1B0GVL6 79 aa13.53□□□□□ -0.24
SMARCA4-203ENST00000429416 A6NJY4 79 aa13.53□□□□□ -0.24
SMARCA4-203ENST00000429416 COX6CP09669 75 aa13.53□□□□□ -0.24
SMARCA4-203ENST00000429416 GP9P14770 177 aa13.53□□□□□ -0.24
SMARCA4-203ENST00000429416 LYZL1Q6UWQ5 148 aa13.53□□□□□ -0.24
SMARCA4-203ENST00000429416 C8orf31Q8N9H6 132 aa13.53□□□□□ -0.24
SMARCA4-203ENST00000429416 DERL1Q9BUN8 251 aa13.53□□□□□ -0.24
SMARCA4-203ENST00000429416 HOXA5P20719 270 aa13.53□□□□□ -0.24
SMARCA4-203ENST00000429416 FNDC10F2Z333 226 aa13.53□□□□□ -0.24
SMARCA4-203ENST00000429416 IGHV3-16A0A0C4DH30 117 aa13.53□□□□□ -0.24
SMARCA4-203ENST00000429416 TCF23Q7RTU1 214 aa13.53□□□□□ -0.24
SMARCA4-203ENST00000429416 CEP192Q8TEP8 1941 aa13.53□□□□□ -0.24
SMARCA4-203ENST00000429416 PDE6HQ13956 83 aa13.52□□□□□ -0.24
SMARCA4-203ENST00000429416 DNLZQ5SXM8 178 aa13.52□□□□□ -0.24
SMARCA4-203ENST00000429416 A6NDN8 102 aa13.52□□□□□ -0.25
SMARCA4-203ENST00000429416 NDUFA3O95167 84 aa13.52□□□□□ -0.25
SMARCA4-203ENST00000429416 NCR2O95944 276 aa13.52□□□□□ -0.25
SMARCA4-203ENST00000429416 C1orf194Q5T5A4 169 aa13.52□□□□□ -0.25
SMARCA4-203ENST00000429416 TSKUQ8WUA8 353 aa13.52□□□□□ -0.25
SMARCA4-203ENST00000429416 ALPK3Q96L96 1907 aa13.52□□□□□ -0.25
SMARCA4-203ENST00000429416 SRSF1Q07955 248 aaKnown RBP eCLIP13.52□□□□□ -0.25
SMARCA4-203ENST00000429416 IGHV7-81A0A0B4J1V7 117 aa13.52□□□□□ -0.25
SMARCA4-203ENST00000429416 DNAJC9-AS1A6NH13 148 aa13.52□□□□□ -0.25
SMARCA4-203ENST00000429416 RNF151Q2KHN1 245 aa13.52□□□□□ -0.25
SMARCA4-203ENST00000429416 HAPLN4Q86UW8 402 aa13.52□□□□□ -0.25
SMARCA4-203ENST00000429416 FASNP49327 2511 aaKnown RBP13.51□□□□□ -0.25
SMARCA4-203ENST00000429416 IFITM2Q01629 132 aa13.51□□□□□ -0.25
SMARCA4-203ENST00000429416 ZNF462Q96JM2 2506 aa13.51□□□□□ -0.25
SMARCA4-203ENST00000429416 LOC107984156A0A0G2JMH3 177 aa13.51□□□□□ -0.25
SMARCA4-203ENST00000429416 ARL17AQ8IVW1 177 aa13.51□□□□□ -0.25
SMARCA4-203ENST00000429416 Q8N7P7 452 aa13.51□□□□□ -0.25
SMARCA4-203ENST00000429416 KRTAP27-1Q3LI81 207 aa13.51□□□□□ -0.25
SMARCA4-203ENST00000429416 GTF2H5Q6ZYL4 71 aa13.5□□□□□ -0.25
SMARCA4-203ENST00000429416 DSCAMO60469 2012 aa13.5□□□□□ -0.25
SMARCA4-203ENST00000429416 PPBPP02775 128 aa13.5□□□□□ -0.25
SMARCA4-203ENST00000429416 LINC00479Q96M42 142 aa13.5□□□□□ -0.25
SMARCA4-203ENST00000429416 PRRC2AP48634 2157 aaKnown RBP13.5□□□□□ -0.25
SMARCA4-203ENST00000429416 ZNF25P17030 456 aaPredicted RBP13.5□□□□□ -0.25
SMARCA4-203ENST00000429416 C1orf159Q96HA4 380 aa13.5□□□□□ -0.25
SMARCA4-203ENST00000429416 PMCHL1Q16048 86 aa13.5□□□□□ -0.25
SMARCA4-203ENST00000429416 IGHV4-31P0DP07 118 aa13.5□□□□□ -0.25
SMARCA4-203ENST00000429416 CDKN1BP46527 198 aa13.5□□□□□ -0.25
SMARCA4-203ENST00000429416 DYSFO75923 2080 aa13.5□□□□□ -0.25
SMARCA4-203ENST00000429416 ZFYVE26Q68DK2 2539 aa13.49□□□□□ -0.25
SMARCA4-203ENST00000429416 LMO4P61968 165 aa13.49□□□□□ -0.25
SMARCA4-203ENST00000429416 FAM19A2Q8N3H0 131 aa13.49□□□□□ -0.25
SMARCA4-203ENST00000429416 TNCP24821 2201 aa13.49□□□□□ -0.25
SMARCA4-203ENST00000429416 ARMS2P0C7Q2 107 aa13.49□□□□□ -0.25
SMARCA4-203ENST00000429416 OR5A1Q8NGJ0 315 aa13.49□□□□□ -0.25
SMARCA4-203ENST00000429416 GAGE12JA6NER3 117 aa13.49□□□□□ -0.25
SMARCA4-203ENST00000429416 AZU1P20160 251 aa13.49□□□□□ -0.25
SMARCA4-203ENST00000429416 GAGE1Q13065 139 aa13.49□□□□□ -0.25
SMARCA4-203ENST00000429416 GAGE4Q13068 117 aa13.49□□□□□ -0.25
SMARCA4-203ENST00000429416 GAGE5Q13069 117 aa13.49□□□□□ -0.25
SMARCA4-203ENST00000429416 GAGE13Q4V321 117 aa13.49□□□□□ -0.25
SMARCA4-203ENST00000429416 CITED2Q99967 270 aaPredicted RBP13.49□□□□□ -0.25
SMARCA4-203ENST00000429416 SMPXQ9UHP9 88 aa13.49□□□□□ -0.25
SMARCA4-203ENST00000429416 SRSF3P84103 164 aaKnown RBP13.48□□□□□ -0.25
SMARCA4-203ENST00000429416 SPATA45Q537H7 98 aa13.48□□□□□ -0.25
SMARCA4-203ENST00000429416 RITA1Q96K30 269 aa13.48□□□□□ -0.25
SMARCA4-203ENST00000429416 IGLC1P0CG04 106 aa13.48□□□□□ -0.25
SMARCA4-203ENST00000429416 SSBP2P81877 361 aaPredicted RBP13.48□□□□□ -0.25
SMARCA4-203ENST00000429416 GUSBP1Q15486 140 aa13.48□□□□□ -0.25
SMARCA4-203ENST00000429416 A0A0U1RRA0 63 aa13.48□□□□□ -0.25
SMARCA4-203ENST00000429416 Q8NFD4 153 aa13.48□□□□□ -0.25
SMARCA4-203ENST00000429416 ORMDL2Q53FV1 153 aa13.48□□□□□ -0.25
SMARCA4-203ENST00000429416 C5orf56Q8N8D9 126 aa13.48□□□□□ -0.25
SMARCA4-203ENST00000429416 CYTL1Q9NRR1 136 aa13.48□□□□□ -0.25
SMARCA4-203ENST00000429416 APRG1Q8IVJ8 170 aa13.47□□□□□ -0.25
SMARCA4-203ENST00000429416 SIRPDQ9H106 197 aa13.47□□□□□ -0.25
SMARCA4-203ENST00000429416 NXT2Q9NPJ8 142 aaKnown RBP13.47□□□□□ -0.25
SMARCA4-203ENST00000429416 MRPS16Q9Y3D3 137 aaKnown RBP13.47□□□□□ -0.25
SMARCA4-203ENST00000429416 PIFOQ8TCI5 191 aa13.47□□□□□ -0.25
SMARCA4-203ENST00000429416 AJUBAQ96IF1 538 aa13.47□□□□□ -0.25
SMARCA4-203ENST00000429416 LINC00469Q8N7U9 141 aa13.47□□□□□ -0.25
SMARCA4-203ENST00000429416 TNRC6AQ8NDV7 1962 aaKnown RBP13.47□□□□□ -0.25
SMARCA4-203ENST00000429416 IGLC7A0M8Q6 106 aa13.47□□□□□ -0.25
SMARCA4-203ENST00000429416 Q8N9W7 124 aa13.47□□□□□ -0.25
SMARCA4-203ENST00000429416 TMEM190Q8WZ59 177 aa13.46□□□□□ -0.25
SMARCA4-203ENST00000429416 TRBV19A0A075B6N1 114 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms