RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 C8orf86Q6ZUL3 223 aa11.02□□□□□ -0.65
RPL28-202ENST00000426763 CHCHD1Q96BP2 118 aaKnown RBP11.02□□□□□ -0.65
RPL28-202ENST00000426763 THAP8Q8NA92 274 aa11.02□□□□□ -0.65
RPL28-202ENST00000426763 JKAMPQ9P055 326 aa11.02□□□□□ -0.65
RPL28-202ENST00000426763 CUL9Q8IWT3 2517 aa11.02□□□□□ -0.65
RPL28-202ENST00000426763 IGLC1P0CG04 106 aa11.01□□□□□ -0.65
RPL28-202ENST00000426763 SLC25A2Q9BXI2 301 aa11.01□□□□□ -0.65
RPL28-202ENST00000426763 ZNF876PQ49A33 203 aa11.01□□□□□ -0.65
RPL28-202ENST00000426763 TMEM14CQ9P0S9 112 aa11.01□□□□□ -0.65
RPL28-202ENST00000426763 XCL2Q9UBD3 114 aa11.01□□□□□ -0.65
RPL28-202ENST00000426763 IGHV7-4-1A0A0J9YVY3 117 aa11.01□□□□□ -0.65
RPL28-202ENST00000426763 C10orf142B7Z368 130 aa11.01□□□□□ -0.65
RPL28-202ENST00000426763 CIDEAO60543 219 aa11.01□□□□□ -0.65
RPL28-202ENST00000426763 MED13Q9UHV7 2174 aa11.01□□□□□ -0.65
RPL28-202ENST00000426763 NPBQ8NG41 125 aa11□□□□□ -0.65
RPL28-202ENST00000426763 FABP2P12104 132 aa11□□□□□ -0.65
RPL28-202ENST00000426763 IGLC7A0M8Q6 106 aa11□□□□□ -0.65
RPL28-202ENST00000426763 D6R8Y8 96 aa11□□□□□ -0.65
RPL28-202ENST00000426763 RIPPLY3P57055 190 aa11□□□□□ -0.65
RPL28-202ENST00000426763 LAGE3Q14657 143 aa11□□□□□ -0.65
RPL28-202ENST00000426763 GFI1BQ5VTD9 330 aa11□□□□□ -0.65
RPL28-202ENST00000426763 NUP35Q8NFH5 326 aa11□□□□□ -0.65
RPL28-202ENST00000426763 NCR2O95944 276 aa11□□□□□ -0.65
RPL28-202ENST00000426763 PTPRSQ13332 1948 aa11□□□□□ -0.65
RPL28-202ENST00000426763 SPINK13Q1W4C9 94 aa11□□□□□ -0.65
RPL28-202ENST00000426763 NIT1Q86X76 327 aa11□□□□□ -0.65
RPL28-202ENST00000426763 C14orf178Q8N769 122 aaPredicted RBP10.99□□□□□ -0.65
RPL28-202ENST00000426763 DEFB130BP0DP73 79 aa10.99□□□□□ -0.65
RPL28-202ENST00000426763 DEFB130AP0DP74 79 aa10.99□□□□□ -0.65
RPL28-202ENST00000426763 APOC4P55056 127 aa10.99□□□□□ -0.65
RPL28-202ENST00000426763 LGALS1P09382 135 aaKnown RBP10.99□□□□□ -0.65
RPL28-202ENST00000426763 LINC00479Q96M42 142 aa10.99□□□□□ -0.65
RPL28-202ENST00000426763 IGKV3D-20A0A0C4DH25 116 aa10.99□□□□□ -0.65
RPL28-202ENST00000426763 FOXE3Q13461 319 aa10.98□□□□□ -0.65
RPL28-202ENST00000426763 A0A1B0GUS0 222 aa10.98□□□□□ -0.65
RPL28-202ENST00000426763 VCYO14598 125 aa10.98□□□□□ -0.65
RPL28-202ENST00000426763 MSMPQ1L6U9 139 aa10.98□□□□□ -0.65
RPL28-202ENST00000426763 ARL6IP6Q8N6S5 226 aa10.98□□□□□ -0.65
RPL28-202ENST00000426763 PCDH15Q96QU1 1955 aa10.98□□□□□ -0.65
RPL28-202ENST00000426763 DPM2O94777 84 aa10.98□□□□□ -0.65
RPL28-202ENST00000426763 PFN1P07737 140 aaKnown RBP10.98□□□□□ -0.65
RPL28-202ENST00000426763 ARMS2P0C7Q2 107 aa10.98□□□□□ -0.65
RPL28-202ENST00000426763 HAPLN4Q86UW8 402 aa10.98□□□□□ -0.65
RPL28-202ENST00000426763 GFRA4Q9GZZ7 299 aa10.98□□□□□ -0.65
RPL28-202ENST00000426763 LINC01559Q495D7 138 aa10.98□□□□□ -0.65
RPL28-202ENST00000426763 ZNF492Q9P255 531 aa10.98□□□□□ -0.65
RPL28-202ENST00000426763 ZFP36P26651 326 aaKnown RBP10.97□□□□□ -0.65
RPL28-202ENST00000426763 LYPD6Q86Y78 171 aa10.97□□□□□ -0.65
RPL28-202ENST00000426763 CHTOPQ9Y3Y2 248 aaKnown RBP10.97□□□□□ -0.65
RPL28-202ENST00000426763 ACACBO00763 2458 aa10.97□□□□□ -0.65
RPL28-202ENST00000426763 MED13LQ71F56 2210 aa10.97□□□□□ -0.65
RPL28-202ENST00000426763 DDTP30046 118 aa10.97□□□□□ -0.65
RPL28-202ENST00000426763 CEP192Q8TEP8 1941 aa10.97□□□□□ -0.65
RPL28-202ENST00000426763 IGHV7-81A0A0B4J1V7 117 aa10.97□□□□□ -0.65
RPL28-202ENST00000426763 CCL24O00175 119 aa10.97□□□□□ -0.65
RPL28-202ENST00000426763 FAM90A2PQ658T7 463 aa10.96□□□□□ -0.65
RPL28-202ENST00000426763 IFI27L1Q96BM0 104 aa10.96□□□□□ -0.65
RPL28-202ENST00000426763 HOXD3P31249 432 aaPredicted RBP10.96□□□□□ -0.65
RPL28-202ENST00000426763 C19orf84I3L1E1 186 aa10.96□□□□□ -0.66
RPL28-202ENST00000426763 CXCL1P09341 107 aa10.96□□□□□ -0.66
RPL28-202ENST00000426763 CDKN1BP46527 198 aa10.96□□□□□ -0.66
RPL28-202ENST00000426763 ZNF491Q8N8L2 437 aa10.96□□□□□ -0.66
RPL28-202ENST00000426763 DOPEY2Q9Y3R5 2298 aa10.96□□□□□ -0.66
RPL28-202ENST00000426763 RHODO00212 210 aa10.96□□□□□ -0.66
RPL28-202ENST00000426763 HIST1H2BKO60814 126 aa10.96□□□□□ -0.66
RPL28-202ENST00000426763 HIST1H2BJP06899 126 aa10.96□□□□□ -0.66
RPL28-202ENST00000426763 HIST1H2BOP23527 126 aa10.96□□□□□ -0.66
RPL28-202ENST00000426763 HIST1H2BBP33778 126 aa10.96□□□□□ -0.66
RPL28-202ENST00000426763 HIST1H2BDP58876 126 aa10.96□□□□□ -0.66
RPL28-202ENST00000426763 HIST1H2BCP62807 126 aa10.96□□□□□ -0.66
RPL28-202ENST00000426763 HIST2H2BEQ16778 126 aa10.96□□□□□ -0.66
RPL28-202ENST00000426763 TMEM95Q3KNT9 176 aa10.96□□□□□ -0.66
RPL28-202ENST00000426763 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.96□□□□□ -0.66
RPL28-202ENST00000426763 HIST1H2BHQ93079 126 aa10.96□□□□□ -0.66
RPL28-202ENST00000426763 HIST1H2BNQ99877 126 aa10.96□□□□□ -0.66
RPL28-202ENST00000426763 HIST1H2BMQ99879 126 aa10.96□□□□□ -0.66
RPL28-202ENST00000426763 MS4A6AQ9H2W1 248 aa10.96□□□□□ -0.66
RPL28-202ENST00000426763 A0A087WWL8 130 aa10.95□□□□□ -0.66
RPL28-202ENST00000426763 OR5A1Q8NGJ0 315 aa10.95□□□□□ -0.66
RPL28-202ENST00000426763 GAGE10A6NGK3 116 aa10.95□□□□□ -0.66
RPL28-202ENST00000426763 RNASE1P07998 156 aaKnown RBP10.95□□□□□ -0.66
RPL28-202ENST00000426763 LRRC75A-AS1Q8N1F1 130 aa10.95□□□□□ -0.66
RPL28-202ENST00000426763 IGFBPL1Q8WX77 278 aa10.95□□□□□ -0.66
RPL28-202ENST00000426763 ALPK3Q96L96 1907 aa10.95□□□□□ -0.66
RPL28-202ENST00000426763 SMPXQ9UHP9 88 aa10.95□□□□□ -0.66
RPL28-202ENST00000426763 IGHV1OR15-1A0A075B7D0 117 aa10.95□□□□□ -0.66
RPL28-202ENST00000426763 DAD1P61803 113 aa10.95□□□□□ -0.66
RPL28-202ENST00000426763 DNAL4O96015 105 aa10.95□□□□□ -0.66
RPL28-202ENST00000426763 C8orf49Q96NF6 230 aa10.95□□□□□ -0.66
RPL28-202ENST00000426763 FNDC4Q9H6D8 234 aaPredicted RBP10.95□□□□□ -0.66
RPL28-202ENST00000426763 DMRT1Q9Y5R6 373 aa10.95□□□□□ -0.66
RPL28-202ENST00000426763 BLCAPP62952 87 aa10.94□□□□□ -0.66
RPL28-202ENST00000426763 LINC00469Q8N7U9 141 aa10.94□□□□□ -0.66
RPL28-202ENST00000426763 C14orf144Q96I85 54 aa10.94□□□□□ -0.66
RPL28-202ENST00000426763 CSTL1Q9H114 145 aa10.94□□□□□ -0.66
RPL28-202ENST00000426763 KNCNA6PVL3 124 aa10.94□□□□□ -0.66
RPL28-202ENST00000426763 ZNF843Q8N446 348 aa10.94□□□□□ -0.66
RPL28-202ENST00000426763 Q8N7P7 452 aa10.94□□□□□ -0.66
RPL28-202ENST00000426763 SMIM13P0DJ93 91 aa10.94□□□□□ -0.66
RPL28-202ENST00000426763 ZNF114Q8NC26 417 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms