RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 C16orf54Q6UWD8 224 aa5.92□□□□□ -1.46
SMARCC1-202ENST00000425518 Q8TAT8 98 aa5.92□□□□□ -1.46
SMARCC1-202ENST00000425518 SPOCK3Q9BQ16 436 aa5.92□□□□□ -1.46
SMARCC1-202ENST00000425518 NAA38Q9BRA0 125 aaKnown RBP5.92□□□□□ -1.46
SMARCC1-202ENST00000425518 VPS25Q9BRG1 176 aa5.92□□□□□ -1.46
SMARCC1-202ENST00000425518 TRAV8-6A0A0B4J262 113 aa5.92□□□□□ -1.46
SMARCC1-202ENST00000425518 NPIPB5A8MRT5 1133 aa5.92□□□□□ -1.46
SMARCC1-202ENST00000425518 SH2D1AO60880 128 aa5.92□□□□□ -1.46
SMARCC1-202ENST00000425518 COX8AP10176 69 aa5.92□□□□□ -1.46
SMARCC1-202ENST00000425518 HOXB4P17483 251 aaPredicted RBP5.92□□□□□ -1.46
SMARCC1-202ENST00000425518 CACNG7P62955 275 aa5.92□□□□□ -1.46
SMARCC1-202ENST00000425518 TWIST1Q15672 202 aa5.92□□□□□ -1.46
SMARCC1-202ENST00000425518 CACNA1AO00555 2505 aa5.92□□□□□ -1.46
SMARCC1-202ENST00000425518 NBR2O15453 112 aa5.91□□□□□ -1.46
SMARCC1-202ENST00000425518 CD5LO43866 347 aa5.91□□□□□ -1.46
SMARCC1-202ENST00000425518 CKS2P33552 79 aa5.91□□□□□ -1.46
SMARCC1-202ENST00000425518 IGF2-ASQ6U949 168 aa5.91□□□□□ -1.46
SMARCC1-202ENST00000425518 DPM3Q9P2X0 92 aa5.91□□□□□ -1.46
SMARCC1-202ENST00000425518 RELNP78509 3460 aa5.91□□□□□ -1.46
SMARCC1-202ENST00000425518 C7orf71A4D174 169 aa5.91□□□□□ -1.46
SMARCC1-202ENST00000425518 FAM90A27PA6NNH2 459 aa5.91□□□□□ -1.46
SMARCC1-202ENST00000425518 TCF15Q12870 199 aa5.91□□□□□ -1.46
SMARCC1-202ENST00000425518 TMEM97Q5BJF2 176 aa5.91□□□□□ -1.46
SMARCC1-202ENST00000425518 FAM104BQ5XKR9 115 aa5.91□□□□□ -1.46
SMARCC1-202ENST00000425518 ORMDL3Q8N138 153 aa5.91□□□□□ -1.46
SMARCC1-202ENST00000425518 MFAP4P55083 255 aa5.91□□□□□ -1.46
SMARCC1-202ENST00000425518 RHOGP84095 191 aa5.91□□□□□ -1.46
SMARCC1-202ENST00000425518 C2orf91Q6ZV80 131 aa5.91□□□□□ -1.46
SMARCC1-202ENST00000425518 LYPD1Q8N2G4 141 aa5.91□□□□□ -1.46
SMARCC1-202ENST00000425518 Q8NA96 180 aa5.91□□□□□ -1.46
SMARCC1-202ENST00000425518 C18orf15Q96N68 181 aa5.91□□□□□ -1.46
SMARCC1-202ENST00000425518 AP1S3Q96PC3 154 aa5.91□□□□□ -1.46
SMARCC1-202ENST00000425518 CST9LQ9H4G1 147 aa5.91□□□□□ -1.46
SMARCC1-202ENST00000425518 THYN1Q9P016 225 aa5.91□□□□□ -1.46
SMARCC1-202ENST00000425518 A0A1B0GW15 77 aa5.9□□□□□ -1.46
SMARCC1-202ENST00000425518 ORM1P02763 201 aa5.9□□□□□ -1.46
SMARCC1-202ENST00000425518 HLA-DMBP28068 263 aa5.9□□□□□ -1.46
SMARCC1-202ENST00000425518 PAX2Q02962 417 aa5.9□□□□□ -1.46
SMARCC1-202ENST00000425518 MRPL51Q4U2R6 128 aaKnown RBP5.9□□□□□ -1.46
SMARCC1-202ENST00000425518 JKAMPQ9P055 326 aa5.9□□□□□ -1.46
SMARCC1-202ENST00000425518 A0A096LNJ9 63 aa5.9□□□□□ -1.46
SMARCC1-202ENST00000425518 TRBV6-1A0A0K0K1D8 114 aa5.9□□□□□ -1.46
SMARCC1-202ENST00000425518 MRPS12O15235 138 aaKnown RBP5.9□□□□□ -1.46
SMARCC1-202ENST00000425518 EGR2P11161 476 aaPredicted RBP5.9□□□□□ -1.46
SMARCC1-202ENST00000425518 CDKN1BP46527 198 aa5.9□□□□□ -1.46
SMARCC1-202ENST00000425518 NMUP48645 174 aa5.9□□□□□ -1.46
SMARCC1-202ENST00000425518 ZNF672Q499Z4 452 aaPredicted RBP5.9□□□□□ -1.46
SMARCC1-202ENST00000425518 Q6AWC8 147 aa5.9□□□□□ -1.46
SMARCC1-202ENST00000425518 PRSS57Q6UWY2 283 aa5.9□□□□□ -1.46
SMARCC1-202ENST00000425518 RAB37Q96AX2 223 aa5.9□□□□□ -1.46
SMARCC1-202ENST00000425518 RABAC1Q9UI14 185 aa5.9□□□□□ -1.46
SMARCC1-202ENST00000425518 GAGE12BA1L429 117 aa5.9□□□□□ -1.47
SMARCC1-202ENST00000425518 GAGE10A6NGK3 116 aa5.9□□□□□ -1.47
SMARCC1-202ENST00000425518 LY6LH3BQJ8 138 aa5.9□□□□□ -1.47
SMARCC1-202ENST00000425518 GRNP28799 593 aaKnown RBP5.9□□□□□ -1.47
SMARCC1-202ENST00000425518 PPIFP30405 207 aaKnown RBP5.9□□□□□ -1.47
SMARCC1-202ENST00000425518 RNF5Q99942 180 aa5.9□□□□□ -1.47
SMARCC1-202ENST00000425518 VGLL1Q99990 258 aa5.9□□□□□ -1.47
SMARCC1-202ENST00000425518 C21orf62Q9NYP8 219 aa5.9□□□□□ -1.47
SMARCC1-202ENST00000425518 PEF1Q9UBV8 284 aaKnown RBP5.9□□□□□ -1.47
SMARCC1-202ENST00000425518 SPTAN1Q13813 2472 aaKnown RBP5.9□□□□□ -1.47
SMARCC1-202ENST00000425518 WI2-2373I1.2A0A1W2PRP0 233 aa5.89□□□□□ -1.47
SMARCC1-202ENST00000425518 NPYP01303 97 aa5.89□□□□□ -1.47
SMARCC1-202ENST00000425518 OCIAD2Q56VL3 154 aa5.89□□□□□ -1.47
SMARCC1-202ENST00000425518 FANCD2OSQ96PS1 177 aa5.89□□□□□ -1.47
SMARCC1-202ENST00000425518 MSRB1Q9NZV6 116 aa5.89□□□□□ -1.47
SMARCC1-202ENST00000425518 ZNF80P51504 273 aaPredicted RBP5.89□□□□□ -1.47
SMARCC1-202ENST00000425518 C5orf64Q2M2E5 130 aa5.89□□□□□ -1.47
SMARCC1-202ENST00000425518 S100A7AQ86SG5 101 aa5.89□□□□□ -1.47
SMARCC1-202ENST00000425518 FER1L6-AS1Q8NA97 138 aa5.89□□□□□ -1.47
SMARCC1-202ENST00000425518 PRR25Q96S07 402 aa5.89□□□□□ -1.47
SMARCC1-202ENST00000425518 RAB1BQ9H0U4 201 aa5.89□□□□□ -1.47
SMARCC1-202ENST00000425518 NOTCH2Q04721 2471 aa5.89□□□□□ -1.47
SMARCC1-202ENST00000425518 ATRXP46100 2492 aa5.89□□□□□ -1.47
SMARCC1-202ENST00000425518 IGHV3OR16-13A0A075B7E8 117 aa5.89□□□□□ -1.47
SMARCC1-202ENST00000425518 IGHV3-74A0A0B4J1X5 117 aa5.89□□□□□ -1.47
SMARCC1-202ENST00000425518 HBDP02042 147 aa5.89□□□□□ -1.47
SMARCC1-202ENST00000425518 TM4SF20Q53R12 229 aa5.89□□□□□ -1.47
SMARCC1-202ENST00000425518 PIP4P2Q8N4L2 257 aa5.89□□□□□ -1.47
SMARCC1-202ENST00000425518 IFI27L1Q96BM0 104 aa5.89□□□□□ -1.47
SMARCC1-202ENST00000425518 IGHV3-66A0A0C4DH42 116 aa5.88□□□□□ -1.47
SMARCC1-202ENST00000425518 A1L4Q6 167 aa5.88□□□□□ -1.47
SMARCC1-202ENST00000425518 H3BUT2 72 aa5.88□□□□□ -1.47
SMARCC1-202ENST00000425518 RPL7P18124 248 aaKnown RBP5.88□□□□□ -1.47
SMARCC1-202ENST00000425518 NDPQ00604 133 aa5.88□□□□□ -1.47
SMARCC1-202ENST00000425518 SAPCD1Q5SSQ6 148 aa5.88□□□□□ -1.47
SMARCC1-202ENST00000425518 ZNF493Q6ZR52 646 aa5.88□□□□□ -1.47
SMARCC1-202ENST00000425518 PCP2Q8IVA1 136 aa5.88□□□□□ -1.47
SMARCC1-202ENST00000425518 ARPC1AQ92747 370 aa5.88□□□□□ -1.47
SMARCC1-202ENST00000425518 SRSF8Q9BRL6 282 aaKnown RBP5.88□□□□□ -1.47
SMARCC1-202ENST00000425518 DKK2Q9UBU2 259 aa5.88□□□□□ -1.47
SMARCC1-202ENST00000425518 COL6A6A6NMZ7 2263 aa5.88□□□□□ -1.47
SMARCC1-202ENST00000425518 SVEP1Q4LDE5 3571 aa5.88□□□□□ -1.47
SMARCC1-202ENST00000425518 CEACAM3P40198 252 aa5.88□□□□□ -1.47
SMARCC1-202ENST00000425518 ERCC8Q13216 396 aa5.88□□□□□ -1.47
SMARCC1-202ENST00000425518 PTPRQQ9UMZ3 2332 aa5.88□□□□□ -1.47
SMARCC1-202ENST00000425518 GAS8-AS1O95177 125 aa5.88□□□□□ -1.47
SMARCC1-202ENST00000425518 EVI2AP22794 236 aa5.88□□□□□ -1.47
SMARCC1-202ENST00000425518 PDE6HQ13956 83 aa5.88□□□□□ -1.47
SMARCC1-202ENST00000425518 DCHS2Q6V1P9 2916 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 112.9 ms