RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 PYGO2Q9BRQ0 406 aa11.6□□□□□ -0.55
UPF3AP3-201ENST00000420996 TMPRSS5Q9H3S3 457 aa11.6□□□□□ -0.55
UPF3AP3-201ENST00000420996 A0A096LPF7 62 aa11.59□□□□□ -0.55
UPF3AP3-201ENST00000420996 TRAV12-3A0A0B4J271 114 aa11.59□□□□□ -0.55
UPF3AP3-201ENST00000420996 LEPP41159 167 aa11.59□□□□□ -0.55
UPF3AP3-201ENST00000420996 TAS2R30P59541 319 aa11.59□□□□□ -0.55
UPF3AP3-201ENST00000420996 Q6ZTI0 123 aa11.59□□□□□ -0.55
UPF3AP3-201ENST00000420996 TMEM37Q8WXS4 190 aa11.59□□□□□ -0.55
UPF3AP3-201ENST00000420996 SAT2Q96F10 170 aaPredicted RBP11.59□□□□□ -0.55
UPF3AP3-201ENST00000420996 RBM38Q9H0Z9 239 aaKnown RBP11.59□□□□□ -0.55
UPF3AP3-201ENST00000420996 PGPEP1Q9NXJ5 209 aa11.59□□□□□ -0.55
UPF3AP3-201ENST00000420996 H3BTX0 84 aa11.58□□□□□ -0.56
UPF3AP3-201ENST00000420996 J3KRW8 73 aa11.58□□□□□ -0.56
UPF3AP3-201ENST00000420996 COX7A2P2O60397 106 aa11.58□□□□□ -0.56
UPF3AP3-201ENST00000420996 TSC22D2O75157 780 aa11.58□□□□□ -0.56
UPF3AP3-201ENST00000420996 CT45A10P0DMU9 189 aa11.58□□□□□ -0.56
UPF3AP3-201ENST00000420996 IGLC2P0DOY2 106 aa11.58□□□□□ -0.56
UPF3AP3-201ENST00000420996 MORN5Q5VZ52 161 aa11.58□□□□□ -0.56
UPF3AP3-201ENST00000420996 ZNF431Q8TF32 576 aaPredicted RBP11.58□□□□□ -0.56
UPF3AP3-201ENST00000420996 C18orf15Q96N68 181 aa11.58□□□□□ -0.56
UPF3AP3-201ENST00000420996 GGACTQ9BVM4 153 aa11.58□□□□□ -0.56
UPF3AP3-201ENST00000420996 LINC00854A0A1B0GVQ3 168 aa11.57□□□□□ -0.56
UPF3AP3-201ENST00000420996 NPIPB6E9PJ23 425 aa11.57□□□□□ -0.56
UPF3AP3-201ENST00000420996 H3BQ15 152 aa11.57□□□□□ -0.56
UPF3AP3-201ENST00000420996 SIVA1O15304 175 aa11.57□□□□□ -0.56
UPF3AP3-201ENST00000420996 ARL16Q0P5N6 197 aa11.57□□□□□ -0.56
UPF3AP3-201ENST00000420996 OPCMLQ14982 345 aa11.57□□□□□ -0.56
UPF3AP3-201ENST00000420996 C10orf113Q5VZT2 155 aa11.57□□□□□ -0.56
UPF3AP3-201ENST00000420996 TRGV2A0A075B6R0 118 aa11.56□□□□□ -0.56
UPF3AP3-201ENST00000420996 NDUFB6O95139 128 aa11.56□□□□□ -0.56
UPF3AP3-201ENST00000420996 SCGB1D2O95969 90 aa11.56□□□□□ -0.56
UPF3AP3-201ENST00000420996 GUK1Q16774 197 aa11.56□□□□□ -0.56
UPF3AP3-201ENST00000420996 MGST2Q99735 147 aa11.56□□□□□ -0.56
UPF3AP3-201ENST00000420996 DNAJC4Q9NNZ3 241 aa11.56□□□□□ -0.56
UPF3AP3-201ENST00000420996 PTTG2Q9NZH5 202 aa11.56□□□□□ -0.56
UPF3AP3-201ENST00000420996 BOLA1Q9Y3E2 137 aa11.56□□□□□ -0.56
UPF3AP3-201ENST00000420996 EREGO14944 169 aa11.55□□□□□ -0.56
UPF3AP3-201ENST00000420996 OR4E1P0C645 316 aa11.55□□□□□ -0.56
UPF3AP3-201ENST00000420996 S100A5P33763 92 aa11.55□□□□□ -0.56
UPF3AP3-201ENST00000420996 IAH1Q2TAA2 248 aaPredicted RBP11.55□□□□□ -0.56
UPF3AP3-201ENST00000420996 LYPD1Q8N2G4 141 aa11.55□□□□□ -0.56
UPF3AP3-201ENST00000420996 C11orf72Q8NBR9 251 aa11.55□□□□□ -0.56
UPF3AP3-201ENST00000420996 ZNF680Q8NEM1 530 aa11.55□□□□□ -0.56
UPF3AP3-201ENST00000420996 GSN-AS1Q9NRJ2 163 aa11.55□□□□□ -0.56
UPF3AP3-201ENST00000420996 FLVCR2Q9UPI3 526 aa11.55□□□□□ -0.56
UPF3AP3-201ENST00000420996 RCL1Q9Y2P8 373 aaKnown RBP11.55□□□□□ -0.56
UPF3AP3-201ENST00000420996 HERC1Q15751 4861 aa11.54□□□□□ -0.56
UPF3AP3-201ENST00000420996 SLC25A5P05141 298 aaKnown RBP11.54□□□□□ -0.56
UPF3AP3-201ENST00000420996 INAFM2P0DMQ5 153 aa11.54□□□□□ -0.56
UPF3AP3-201ENST00000420996 CDPF1Q6NVV7 123 aa11.54□□□□□ -0.56
UPF3AP3-201ENST00000420996 LINC00467Q9BRT7 94 aa11.54□□□□□ -0.56
UPF3AP3-201ENST00000420996 GSKIPQ9P0R6 139 aa11.54□□□□□ -0.56
UPF3AP3-201ENST00000420996 FUT9Q9Y231 359 aa11.54□□□□□ -0.56
UPF3AP3-201ENST00000420996 TRGV1A0A0A0MS02 117 aa11.53□□□□□ -0.56
UPF3AP3-201ENST00000420996 C7orf66A4D0T2 115 aa11.53□□□□□ -0.56
UPF3AP3-201ENST00000420996 C7orf71A4D174 169 aa11.53□□□□□ -0.56
UPF3AP3-201ENST00000420996 NAP1L6A6NFF2 107 aa11.53□□□□□ -0.56
UPF3AP3-201ENST00000420996 ZNF253O75346 499 aa11.53□□□□□ -0.56
UPF3AP3-201ENST00000420996 ZNF324O75467 553 aaPredicted RBP11.53□□□□□ -0.56
UPF3AP3-201ENST00000420996 XGP55808 180 aa11.53□□□□□ -0.56
UPF3AP3-201ENST00000420996 ERVFC1-1P60608 527 aa11.53□□□□□ -0.56
UPF3AP3-201ENST00000420996 ANXA2RQ3ZCQ2 193 aa11.53□□□□□ -0.56
UPF3AP3-201ENST00000420996 Q6ZRG5 221 aa11.53□□□□□ -0.56
UPF3AP3-201ENST00000420996 TRAV5A0A0B4J249 113 aa11.52□□□□□ -0.57
UPF3AP3-201ENST00000420996 NXPH4O95158 308 aa11.52□□□□□ -0.57
UPF3AP3-201ENST00000420996 CAMLGP49069 296 aa11.52□□□□□ -0.57
UPF3AP3-201ENST00000420996 RAB31Q13636 194 aa11.52□□□□□ -0.57
UPF3AP3-201ENST00000420996 EIF4E3Q8N5X7 224 aaKnown RBP11.52□□□□□ -0.57
UPF3AP3-201ENST00000420996 OR1L4Q8NGR5 311 aa11.52□□□□□ -0.57
UPF3AP3-201ENST00000420996 MRPL53Q96EL3 112 aaKnown RBP11.52□□□□□ -0.57
UPF3AP3-201ENST00000420996 ICOSQ9Y6W8 199 aa11.52□□□□□ -0.57
UPF3AP3-201ENST00000420996 CCDC160A6NGH7 325 aa11.51□□□□□ -0.57
UPF3AP3-201ENST00000420996 KLLNB2CW77 178 aa11.51□□□□□ -0.57
UPF3AP3-201ENST00000420996 PAX4O43316 350 aa11.51□□□□□ -0.57
UPF3AP3-201ENST00000420996 SPINK4O60575 86 aa11.51□□□□□ -0.57
UPF3AP3-201ENST00000420996 MBPP02686 304 aaPredicted RBP11.51□□□□□ -0.57
UPF3AP3-201ENST00000420996 FUSP35637 526 aaKnown RBP eCLIP11.51□□□□□ -0.57
UPF3AP3-201ENST00000420996 ERCC8Q13216 396 aa11.51□□□□□ -0.57
UPF3AP3-201ENST00000420996 MIC13Q5XKP0 118 aa11.51□□□□□ -0.57
UPF3AP3-201ENST00000420996 NRARPQ7Z6K4 114 aa11.51□□□□□ -0.57
UPF3AP3-201ENST00000420996 NFE4Q86UQ8 179 aa11.51□□□□□ -0.57
UPF3AP3-201ENST00000420996 LINC00477Q96M19 166 aa11.51□□□□□ -0.57
UPF3AP3-201ENST00000420996 PFDN5Q99471 154 aa11.51□□□□□ -0.57
UPF3AP3-201ENST00000420996 KLF12Q9Y4X4 402 aa11.51□□□□□ -0.57
UPF3AP3-201ENST00000420996 TNFRSF18Q9Y5U5 241 aa11.51□□□□□ -0.57
UPF3AP3-201ENST00000420996 INPP1P49441 399 aa11.5□□□□□ -0.57
UPF3AP3-201ENST00000420996 TCL1AP56279 114 aa11.5□□□□□ -0.57
UPF3AP3-201ENST00000420996 CD300CQ08708 224 aa11.5□□□□□ -0.57
UPF3AP3-201ENST00000420996 C12orf45Q8N5I9 185 aaPredicted RBP11.5□□□□□ -0.57
UPF3AP3-201ENST00000420996 MITD1Q8WV92 249 aa11.5□□□□□ -0.57
UPF3AP3-201ENST00000420996 ST6GAL2Q96JF0 529 aa11.5□□□□□ -0.57
UPF3AP3-201ENST00000420996 FAM19A4Q96LR4 140 aa11.5□□□□□ -0.57
UPF3AP3-201ENST00000420996 SRRQ9GZT4 340 aa11.5□□□□□ -0.57
UPF3AP3-201ENST00000420996 TRBV19A0A075B6N1 114 aa11.49□□□□□ -0.57
UPF3AP3-201ENST00000420996 L7N2F9 121 aa11.49□□□□□ -0.57
UPF3AP3-201ENST00000420996 M0R3E3 92 aa11.49□□□□□ -0.57
UPF3AP3-201ENST00000420996 MPDU1O75352 247 aa11.49□□□□□ -0.57
UPF3AP3-201ENST00000420996 VAMP2P63027 116 aa11.49□□□□□ -0.57
UPF3AP3-201ENST00000420996 SLAQ13239 276 aa11.49□□□□□ -0.57
UPF3AP3-201ENST00000420996 BTN1A1Q13410 526 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms