RNA–Protein interactions for RNA: ENST00000412962.4

CROCCP2-202, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 2, humanhuman

BASIC

Gene CROCCP2, Length 2,773 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2-202ENST00000412962 COX6B1P14854 86 aa13.65□□□□□ -0.22
CROCCP2-202ENST00000412962 HNRNPA3P51991 378 aaKnown RBP13.65□□□□□ -0.22
CROCCP2-202ENST00000412962 TPPP2P59282 170 aa13.65□□□□□ -0.22
CROCCP2-202ENST00000412962 SRSF1Q07955 248 aaKnown RBP eCLIP13.65□□□□□ -0.223e-9■■□□□ 12.6
CROCCP2-202ENST00000412962 LINC00322Q6ZN03 302 aaPredicted RBP13.65□□□□□ -0.22
CROCCP2-202ENST00000412962 IZUMO1RA6ND01 250 aa13.65□□□□□ -0.22
CROCCP2-202ENST00000412962 IGLV2-11P01706 119 aa13.65□□□□□ -0.22
CROCCP2-202ENST00000412962 TMEM136Q6ZRR5 245 aa13.65□□□□□ -0.22
CROCCP2-202ENST00000412962 LYPD1Q8N2G4 141 aa13.65□□□□□ -0.22
CROCCP2-202ENST00000412962 HIF1ANQ9NWT6 349 aa13.65□□□□□ -0.22
CROCCP2-202ENST00000412962 RABAC1Q9UI14 185 aa13.65□□□□□ -0.22
CROCCP2-202ENST00000412962 LRRK2Q5S007 2527 aa13.64□□□□□ -0.23
CROCCP2-202ENST00000412962 CLEC3BP05452 202 aa13.64□□□□□ -0.23
CROCCP2-202ENST00000412962 PRNTQ86SH4 94 aa13.64□□□□□ -0.23
CROCCP2-202ENST00000412962 Q8N976 141 aa13.64□□□□□ -0.23
CROCCP2-202ENST00000412962 COX11Q9Y6N1 276 aa13.64□□□□□ -0.23
CROCCP2-202ENST00000412962 UBR5O95071 2799 aaPredicted RBP13.64□□□□□ -0.23
CROCCP2-202ENST00000412962 DSCR9P59020 149 aa13.64□□□□□ -0.23
CROCCP2-202ENST00000412962 CCDC140Q96MF4 163 aa13.64□□□□□ -0.23
CROCCP2-202ENST00000412962 ZNF331Q9NQX6 463 aaPredicted RBP13.64□□□□□ -0.23
CROCCP2-202ENST00000412962 B4DSR2 109 aa13.63□□□□□ -0.23
CROCCP2-202ENST00000412962 DIRC3C9JPN6 131 aa13.63□□□□□ -0.23
CROCCP2-202ENST00000412962 LY6EQ16553 131 aa13.63□□□□□ -0.23
CROCCP2-202ENST00000412962 COX19Q49B96 90 aa13.63□□□□□ -0.23
CROCCP2-202ENST00000412962 LINC00527Q9UJ94 153 aa13.63□□□□□ -0.23
CROCCP2-202ENST00000412962 TMEM238C9JI98 176 aa13.63□□□□□ -0.23
CROCCP2-202ENST00000412962 CTRLP40313 264 aa13.63□□□□□ -0.23
CROCCP2-202ENST00000412962 TSKUQ8WUA8 353 aa13.63□□□□□ -0.23
CROCCP2-202ENST00000412962 TMEM190Q8WZ59 177 aa13.63□□□□□ -0.23
CROCCP2-202ENST00000412962 GNB4Q9HAV0 340 aa13.63□□□□□ -0.23
CROCCP2-202ENST00000412962 M0R3E3 92 aa13.62□□□□□ -0.23
CROCCP2-202ENST00000412962 BMPR1BO00238 502 aa13.62□□□□□ -0.23
CROCCP2-202ENST00000412962 IGLC3P0DOY3 106 aa13.62□□□□□ -0.23
CROCCP2-202ENST00000412962 PDE6HQ13956 83 aa13.62□□□□□ -0.23
CROCCP2-202ENST00000412962 CLEC19AQ6UXS0 136 aa13.62□□□□□ -0.23
CROCCP2-202ENST00000412962 CIARTQ8N365 385 aaPredicted RBP13.62□□□□□ -0.23
CROCCP2-202ENST00000412962 NUP35Q8NFH5 326 aa13.62□□□□□ -0.23
CROCCP2-202ENST00000412962 RPP21Q9H633 154 aaKnown RBP13.62□□□□□ -0.23
CROCCP2-202ENST00000412962 ZNF492Q9P255 531 aa13.62□□□□□ -0.23
CROCCP2-202ENST00000412962 TRAV41A0A0B4J266 112 aa13.62□□□□□ -0.23
CROCCP2-202ENST00000412962 RPL7P18124 248 aaKnown RBP13.62□□□□□ -0.23
CROCCP2-202ENST00000412962 ZNF738Q8NE65 137 aa13.62□□□□□ -0.23
CROCCP2-202ENST00000412962 AAMDCQ9H7C9 122 aa13.62□□□□□ -0.23
CROCCP2-202ENST00000412962 C19orf71A6NCJ1 209 aa13.61□□□□□ -0.23
CROCCP2-202ENST00000412962 H3BUX3 64 aa13.61□□□□□ -0.23
CROCCP2-202ENST00000412962 HLA-DQA1P01909 254 aa13.61□□□□□ -0.23
CROCCP2-202ENST00000412962 SMIM15Q7Z3B0 74 aa13.61□□□□□ -0.23
CROCCP2-202ENST00000412962 TMEM75Q8N9X5 138 aa13.61□□□□□ -0.23
CROCCP2-202ENST00000412962 EEF1AKMT3Q96AZ1 226 aa13.61□□□□□ -0.23
CROCCP2-202ENST00000412962 SELENOKQ9Y6D0 94 aa13.61□□□□□ -0.23
CROCCP2-202ENST00000412962 EPG5Q9HCE0 2579 aa13.61□□□□□ -0.23
CROCCP2-202ENST00000412962 HIGD1CA8MV81 97 aa13.61□□□□□ -0.23
CROCCP2-202ENST00000412962 AVPP01185 164 aa13.61□□□□□ -0.23
CROCCP2-202ENST00000412962 P01737 135 aa13.61□□□□□ -0.23
CROCCP2-202ENST00000412962 Q0VG73 95 aa13.61□□□□□ -0.23
CROCCP2-202ENST00000412962 PRSS22Q9GZN4 317 aa13.61□□□□□ -0.23
CROCCP2-202ENST00000412962 K7EQM0 130 aa13.6□□□□□ -0.23
CROCCP2-202ENST00000412962 SLC25A16P16260 332 aa13.6□□□□□ -0.23
CROCCP2-202ENST00000412962 VAMP3Q15836 100 aa13.6□□□□□ -0.23
CROCCP2-202ENST00000412962 ZC2HC1AQ96GY0 325 aa13.6□□□□□ -0.23
CROCCP2-202ENST00000412962 ZFAND3Q9H8U3 227 aa13.6□□□□□ -0.23
CROCCP2-202ENST00000412962 ANKRD17O75179 2603 aaKnown RBP13.6□□□□□ -0.23
CROCCP2-202ENST00000412962 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.6□□□□□ -0.232e-7■■■□□ 15.9
CROCCP2-202ENST00000412962 FBN2P35556 2912 aa13.6□□□□□ -0.23
CROCCP2-202ENST00000412962 PPBPP02775 128 aa13.6□□□□□ -0.23
CROCCP2-202ENST00000412962 PAFAH1B2P68402 229 aa13.6□□□□□ -0.23
CROCCP2-202ENST00000412962 C19orf54Q5BKX5 351 aa13.6□□□□□ -0.23
CROCCP2-202ENST00000412962 WFDC12Q8WWY7 111 aa13.6□□□□□ -0.23
CROCCP2-202ENST00000412962 DAZAP1Q96EP5 407 aaKnown RBP13.6□□□□□ -0.23
CROCCP2-202ENST00000412962 CSTL1Q9H114 145 aa13.6□□□□□ -0.23
CROCCP2-202ENST00000412962 UQCR10Q9UDW1 63 aa13.6□□□□□ -0.23
CROCCP2-202ENST00000412962 TRBV6-1A0A0K0K1D8 114 aa13.6□□□□□ -0.23
CROCCP2-202ENST00000412962 APCSP02743 223 aa13.6□□□□□ -0.23
CROCCP2-202ENST00000412962 RIPPLY3P57055 190 aa13.6□□□□□ -0.23
CROCCP2-202ENST00000412962 SRIP30626 198 aa13.59□□□□□ -0.23
CROCCP2-202ENST00000412962 PSG3Q16557 428 aa13.59□□□□□ -0.23
CROCCP2-202ENST00000412962 TRBV7-1A0A0A6YYK4 115 aa13.59□□□□□ -0.23
CROCCP2-202ENST00000412962 A6NDX4 124 aa13.59□□□□□ -0.23
CROCCP2-202ENST00000412962 ZNF253O75346 499 aa13.59□□□□□ -0.23
CROCCP2-202ENST00000412962 PMCHP20382 165 aa13.59□□□□□ -0.23
CROCCP2-202ENST00000412962 PSG9Q00887 426 aa13.59□□□□□ -0.23
CROCCP2-202ENST00000412962 ATP5G2Q06055 141 aa13.59□□□□□ -0.23
CROCCP2-202ENST00000412962 TCF24Q7RTU0 167 aa13.59□□□□□ -0.23
CROCCP2-202ENST00000412962 OR4B1Q8NGF8 309 aa13.59□□□□□ -0.23
CROCCP2-202ENST00000412962 CST9LQ9H4G1 147 aa13.59□□□□□ -0.23
CROCCP2-202ENST00000412962 PSG8Q9UQ74 426 aa13.59□□□□□ -0.23
CROCCP2-202ENST00000412962 SMAD5-AS1Q9Y6J3 95 aa13.59□□□□□ -0.23
CROCCP2-202ENST00000412962 CRIP2P52943 208 aaPredicted RBP13.58□□□□□ -0.24
CROCCP2-202ENST00000412962 CT83Q5H943 113 aa13.58□□□□□ -0.24
CROCCP2-202ENST00000412962 LCN12Q6JVE5 192 aa13.58□□□□□ -0.24
CROCCP2-202ENST00000412962 ESDP10768 282 aa13.58□□□□□ -0.24
CROCCP2-202ENST00000412962 COL8A1P27658 744 aa13.58□□□□□ -0.24
CROCCP2-202ENST00000412962 SLAQ13239 276 aa13.58□□□□□ -0.24
CROCCP2-202ENST00000412962 OCIAD2Q56VL3 154 aa13.58□□□□□ -0.24
CROCCP2-202ENST00000412962 WIPF2Q8TF74 440 aaPredicted RBP13.58□□□□□ -0.24
CROCCP2-202ENST00000412962 POLQO75417 2590 aa13.57□□□□□ -0.24
CROCCP2-202ENST00000412962 A8MWL6 223 aa13.57□□□□□ -0.24
CROCCP2-202ENST00000412962 CAMPP49913 170 aa13.57□□□□□ -0.24
CROCCP2-202ENST00000412962 RASL11AQ6T310 242 aa13.57□□□□□ -0.24
CROCCP2-202ENST00000412962 GATA3P23771 443 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms