RNA–Protein interactions for RNA: ENST00000406638.6

LSP1-204, Transcript of lymphocyte specific protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LSP1, Length 2,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1-204ENST00000406638 BCL6BQ8N143 479 aaPredicted RBP12.87□□□□□ -0.35
LSP1-204ENST00000406638 CCL17Q92583 94 aa12.87□□□□□ -0.35
LSP1-204ENST00000406638 HARBI1Q96MB7 349 aa12.87□□□□□ -0.35
LSP1-204ENST00000406638 SIGLEC8Q9NYZ4 499 aa12.87□□□□□ -0.35
LSP1-204ENST00000406638 RNF7Q9UBF6 113 aa12.87□□□□□ -0.35
LSP1-204ENST00000406638 RAB9AP51151 201 aa12.86□□□□□ -0.35
LSP1-204ENST00000406638 LGALS9BQ3B8N2 356 aa12.86□□□□□ -0.35
LSP1-204ENST00000406638 LGALS9CQ6DKI2 356 aa12.86□□□□□ -0.35
LSP1-204ENST00000406638 Q86TA4 180 aa12.86□□□□□ -0.35
LSP1-204ENST00000406638 C22orf46C9J442 243 aa12.86□□□□□ -0.35
LSP1-204ENST00000406638 SIVA1O15304 175 aa12.86□□□□□ -0.35
LSP1-204ENST00000406638 LY6HO94772 140 aa12.86□□□□□ -0.35
LSP1-204ENST00000406638 SCGB1A1P11684 91 aa12.86□□□□□ -0.35
LSP1-204ENST00000406638 GATA4P43694 442 aa12.86□□□□□ -0.35
LSP1-204ENST00000406638 EXOC3-AS1Q8N2X6 119 aa12.86□□□□□ -0.35
LSP1-204ENST00000406638 STXBP6Q8NFX7 210 aa12.86□□□□□ -0.35
LSP1-204ENST00000406638 FAM222BQ8WU58 562 aa12.86□□□□□ -0.35
LSP1-204ENST00000406638 VGLL1Q99990 258 aa12.86□□□□□ -0.35
LSP1-204ENST00000406638 DKK2Q9UBU2 259 aa12.86□□□□□ -0.35
LSP1-204ENST00000406638 TACC2O95359 2948 aa12.86□□□□□ -0.35
LSP1-204ENST00000406638 TMEM189A5PLL7 270 aa12.85□□□□□ -0.35
LSP1-204ENST00000406638 ZNF785A8K8V0 405 aa12.85□□□□□ -0.35
LSP1-204ENST00000406638 D6R8Y8 96 aa12.85□□□□□ -0.35
LSP1-204ENST00000406638 RIGQ13278 110 aa12.85□□□□□ -0.35
LSP1-204ENST00000406638 CCDC144NLQ6NUI1 221 aa12.85□□□□□ -0.35
LSP1-204ENST00000406638 SLC25A48Q6ZT89 311 aaKnown RBP12.85□□□□□ -0.35
LSP1-204ENST00000406638 ZNF414Q96IQ9 312 aa12.85□□□□□ -0.35
LSP1-204ENST00000406638 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.85□□□□□ -0.35
LSP1-204ENST00000406638 CD3EP07766 207 aa12.85□□□□□ -0.35
LSP1-204ENST00000406638 MZT1Q08AG7 82 aa12.85□□□□□ -0.35
LSP1-204ENST00000406638 SH2D6Q7Z4S9 175 aa12.85□□□□□ -0.35
LSP1-204ENST00000406638 EPG5Q9HCE0 2579 aa12.84□□□□□ -0.35
LSP1-204ENST00000406638 CGB1A6NKQ9 187 aa12.84□□□□□ -0.35
LSP1-204ENST00000406638 GAFA1Q96PS6 74 aa12.84□□□□□ -0.35
LSP1-204ENST00000406638 SVEP1Q4LDE5 3571 aa12.84□□□□□ -0.35
LSP1-204ENST00000406638 APELAP0DMC3 54 aa12.84□□□□□ -0.35
LSP1-204ENST00000406638 GP9P14770 177 aa12.84□□□□□ -0.35
LSP1-204ENST00000406638 CEACAM3P40198 252 aa12.84□□□□□ -0.35
LSP1-204ENST00000406638 MRPL20Q9BYC9 149 aaKnown RBP12.84□□□□□ -0.35
LSP1-204ENST00000406638 DYNLRB1Q9NP97 96 aa12.84□□□□□ -0.35
LSP1-204ENST00000406638 FLNCQ14315 2725 aa12.84□□□□□ -0.35
LSP1-204ENST00000406638 IGLV2-11P01706 119 aa12.83□□□□□ -0.36
LSP1-204ENST00000406638 PRB1P04280 392 aa12.83□□□□□ -0.36
LSP1-204ENST00000406638 CKS1BP61024 79 aa12.83□□□□□ -0.36
LSP1-204ENST00000406638 HCP5Q6MZN7 132 aa12.83□□□□□ -0.36
LSP1-204ENST00000406638 MTURNQ8N3F0 131 aa12.83□□□□□ -0.36
LSP1-204ENST00000406638 DSCAML1Q8TD84 2053 aa12.83□□□□□ -0.36
LSP1-204ENST00000406638 A0A1W2PPR1 153 aa12.83□□□□□ -0.36
LSP1-204ENST00000406638 FBXL19-AS1Q494R0 122 aa12.83□□□□□ -0.36
LSP1-204ENST00000406638 LYPD2Q6UXB3 125 aa12.83□□□□□ -0.36
LSP1-204ENST00000406638 THAP8Q8NA92 274 aa12.83□□□□□ -0.36
LSP1-204ENST00000406638 IFI27L1Q96BM0 104 aa12.83□□□□□ -0.36
LSP1-204ENST00000406638 SPANXB1Q9NS25 103 aaPredicted RBP12.83□□□□□ -0.36
LSP1-204ENST00000406638 IGKV2D-26A0A0A0MRZ7 120 aa12.82□□□□□ -0.36
LSP1-204ENST00000406638 LOXP28300 417 aaPredicted RBP12.82□□□□□ -0.36
LSP1-204ENST00000406638 ETDBQ3ZM63 59 aa12.82□□□□□ -0.36
LSP1-204ENST00000406638 NGBQ9NPG2 151 aa12.82□□□□□ -0.36
LSP1-204ENST00000406638 NHP2Q9NX24 153 aaKnown RBP12.82□□□□□ -0.36
LSP1-204ENST00000406638 C19orf84I3L1E1 186 aa12.82□□□□□ -0.36
LSP1-204ENST00000406638 AMN1Q8IY45 258 aa12.82□□□□□ -0.36
LSP1-204ENST00000406638 PRELID3AQ96N28 172 aa12.82□□□□□ -0.36
LSP1-204ENST00000406638 TRAV26-1A0A087WT03 109 aa12.81□□□□□ -0.36
LSP1-204ENST00000406638 TMEM213A2RRL7 107 aa12.81□□□□□ -0.36
LSP1-204ENST00000406638 ARPC1AQ92747 370 aa12.81□□□□□ -0.36
LSP1-204ENST00000406638 TMSB15BA0A087X1C1 80 aa12.81□□□□□ -0.36
LSP1-204ENST00000406638 SCGB2A2Q13296 93 aa12.81□□□□□ -0.36
LSP1-204ENST00000406638 SPAG8Q99932 426 aaPredicted RBP12.81□□□□□ -0.36
LSP1-204ENST00000406638 H3BMG7 143 aa12.8□□□□□ -0.36
LSP1-204ENST00000406638 SUB1P53999 127 aaKnown RBP eCLIP12.8□□□□□ -0.36
LSP1-204ENST00000406638 ATP5G2Q06055 141 aa12.8□□□□□ -0.36
LSP1-204ENST00000406638 SMKR1H3BMG3 65 aa12.8□□□□□ -0.36
LSP1-204ENST00000406638 HBDP02042 147 aa12.8□□□□□ -0.36
LSP1-204ENST00000406638 OSR1Q8TAX0 266 aaPredicted RBP12.8□□□□□ -0.36
LSP1-204ENST00000406638 UTP20O75691 2785 aaKnown RBP12.8□□□□□ -0.36
LSP1-204ENST00000406638 NDUFS7O75251 213 aa12.79□□□□□ -0.36
LSP1-204ENST00000406638 INSL3P51460 131 aa12.79□□□□□ -0.36
LSP1-204ENST00000406638 PRB3Q04118 309 aaPredicted RBP12.79□□□□□ -0.36
LSP1-204ENST00000406638 AMTNQ6UX39 209 aa12.79□□□□□ -0.36
LSP1-204ENST00000406638 TMEM178BH3BS89 294 aa12.79□□□□□ -0.36
LSP1-204ENST00000406638 TNFRSF1AP19438 455 aa12.79□□□□□ -0.36
LSP1-204ENST00000406638 DIAPH2-AS1Q14236 149 aa12.79□□□□□ -0.36
LSP1-204ENST00000406638 PHLDA1Q8WV24 401 aaPredicted RBP12.79□□□□□ -0.36
LSP1-204ENST00000406638 CHAC1Q9BUX1 264 aa12.79□□□□□ -0.36
LSP1-204ENST00000406638 RAB9BQ9NP90 201 aa12.79□□□□□ -0.36
LSP1-204ENST00000406638 MED13LQ71F56 2210 aa12.79□□□□□ -0.36
LSP1-204ENST00000406638 USP9XQ93008 2570 aaPredicted RBP12.78□□□□□ -0.36
LSP1-204ENST00000406638 CRIP1P50238 77 aa12.78□□□□□ -0.36
LSP1-204ENST00000406638 DLX1P56177 255 aa12.78□□□□□ -0.36
LSP1-204ENST00000406638 TPSG1Q9NRR2 321 aa12.78□□□□□ -0.36
LSP1-204ENST00000406638 CTSZQ9UBR2 303 aa12.78□□□□□ -0.36
LSP1-204ENST00000406638 RPUSD1Q9UJJ7 312 aaKnown RBP12.78□□□□□ -0.36
LSP1-204ENST00000406638 J3QR89 54 aa12.78□□□□□ -0.36
LSP1-204ENST00000406638 CRYBA4P53673 196 aa12.78□□□□□ -0.36
LSP1-204ENST00000406638 ZNF672Q499Z4 452 aaPredicted RBP12.78□□□□□ -0.36
LSP1-204ENST00000406638 ITLN2Q8WWU7 325 aaPredicted RBP12.78□□□□□ -0.36
LSP1-204ENST00000406638 C17orf77Q96MU5 243 aa12.78□□□□□ -0.36
LSP1-204ENST00000406638 A0A1W2PPI3 338 aa12.77□□□□□ -0.36
LSP1-204ENST00000406638 LYZL1Q6UWQ5 148 aa12.77□□□□□ -0.36
LSP1-204ENST00000406638 FOXI2Q6ZQN5 318 aa12.77□□□□□ -0.36
LSP1-204ENST00000406638 ORMDL3Q8N138 153 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms