RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 ATRXP46100 2492 aa7.66□□□□□ -1.18
MSH2-202ENST00000406134 CACNA1AO00555 2505 aa7.66□□□□□ -1.18
MSH2-202ENST00000406134 PRTN3P24158 256 aa7.66□□□□□ -1.18
MSH2-202ENST00000406134 FCGR2BP31994 310 aaPredicted RBP7.66□□□□□ -1.18
MSH2-202ENST00000406134 KLK9Q2XQG4 91 aa7.66□□□□□ -1.18
MSH2-202ENST00000406134 KLK9Q9UKQ9 250 aa7.66□□□□□ -1.18
MSH2-202ENST00000406134 MSRB2Q9Y3D2 182 aa7.66□□□□□ -1.18
MSH2-202ENST00000406134 SPG11Q96JI7 2443 aa7.66□□□□□ -1.18
MSH2-202ENST00000406134 A0A1W2PRD5 423 aa7.66□□□□□ -1.18
MSH2-202ENST00000406134 A0A1W2PRF3 423 aa7.66□□□□□ -1.18
MSH2-202ENST00000406134 A0A1W2PRM7 423 aa7.66□□□□□ -1.18
MSH2-202ENST00000406134 IGHV3-23P01764 117 aa7.66□□□□□ -1.18
MSH2-202ENST00000406134 SCRT2Q9NQ03 307 aa7.66□□□□□ -1.18
MSH2-202ENST00000406134 IGHV7-81A0A0B4J1V7 117 aa7.65□□□□□ -1.18
MSH2-202ENST00000406134 OR4C46A6NHA9 309 aa7.65□□□□□ -1.18
MSH2-202ENST00000406134 CNIH1O95406 144 aa7.65□□□□□ -1.18
MSH2-202ENST00000406134 CTSGP08311 255 aa7.65□□□□□ -1.18
MSH2-202ENST00000406134 HLA-DMBP28068 263 aa7.65□□□□□ -1.18
MSH2-202ENST00000406134 ZNF562Q6V9R5 426 aa7.65□□□□□ -1.18
MSH2-202ENST00000406134 VMO1Q7Z5L0 202 aa7.65□□□□□ -1.18
MSH2-202ENST00000406134 HNRNPA3P51991 378 aaKnown RBP7.65□□□□□ -1.18
MSH2-202ENST00000406134 PLGLAQ15195 96 aa7.65□□□□□ -1.18
MSH2-202ENST00000406134 A0A1B0GUT8 65 aa7.65□□□□□ -1.19
MSH2-202ENST00000406134 CCL21O00585 134 aa7.65□□□□□ -1.19
MSH2-202ENST00000406134 SIRPDQ9H106 197 aa7.65□□□□□ -1.19
MSH2-202ENST00000406134 IGKV2-40A0A087WW87 121 aaPredicted RBP7.64□□□□□ -1.19
MSH2-202ENST00000406134 TMEM213A2RRL7 107 aa7.64□□□□□ -1.19
MSH2-202ENST00000406134 NDUFS7O75251 213 aa7.64□□□□□ -1.19
MSH2-202ENST00000406134 IGKV2D-40P01614 121 aaPredicted RBP7.64□□□□□ -1.19
MSH2-202ENST00000406134 PDE6HQ13956 83 aa7.64□□□□□ -1.19
MSH2-202ENST00000406134 LINC01545Q5VT33 79 aa7.64□□□□□ -1.19
MSH2-202ENST00000406134 UNQ5815/PRO19632Q6UWF5 114 aa7.64□□□□□ -1.19
MSH2-202ENST00000406134 Q8N9W7 124 aa7.64□□□□□ -1.19
MSH2-202ENST00000406134 ARPC1AQ92747 370 aa7.64□□□□□ -1.19
MSH2-202ENST00000406134 HINT1P49773 126 aaPredicted RBP7.64□□□□□ -1.19
MSH2-202ENST00000406134 IGFL4Q6B9Z1 124 aa7.64□□□□□ -1.19
MSH2-202ENST00000406134 TXN2Q99757 166 aa7.64□□□□□ -1.19
MSH2-202ENST00000406134 ZFAND3Q9H8U3 227 aa7.64□□□□□ -1.19
MSH2-202ENST00000406134 LOC105371242A0A075B767 164 aa7.64□□□□□ -1.19
MSH2-202ENST00000406134 CLPSL1A2RUU4 121 aa7.64□□□□□ -1.19
MSH2-202ENST00000406134 SH2D1AO60880 128 aa7.64□□□□□ -1.19
MSH2-202ENST00000406134 LEPROTL1O95214 131 aa7.64□□□□□ -1.19
MSH2-202ENST00000406134 RIPPLY3P57055 190 aa7.64□□□□□ -1.19
MSH2-202ENST00000406134 DAZAP1Q96EP5 407 aaKnown RBP7.64□□□□□ -1.19
MSH2-202ENST00000406134 VGLL1Q99990 258 aa7.64□□□□□ -1.19
MSH2-202ENST00000406134 GAS8-AS1O95177 125 aa7.63□□□□□ -1.19
MSH2-202ENST00000406134 DTX2Q86UW9 622 aa7.63□□□□□ -1.19
MSH2-202ENST00000406134 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.63□□□□□ -1.19
MSH2-202ENST00000406134 OR2T8A6NH00 312 aa7.63□□□□□ -1.19
MSH2-202ENST00000406134 LYZL1Q6UWQ5 148 aa7.63□□□□□ -1.19
MSH2-202ENST00000406134 C2orf91Q6ZV80 131 aa7.63□□□□□ -1.19
MSH2-202ENST00000406134 KLHDC1Q8N7A1 406 aa7.63□□□□□ -1.19
MSH2-202ENST00000406134 ZNF747Q9BV97 191 aa7.63□□□□□ -1.19
MSH2-202ENST00000406134 RAB1BQ9H0U4 201 aa7.63□□□□□ -1.19
MSH2-202ENST00000406134 IGLC6P0CF74 106 aa7.63□□□□□ -1.19
MSH2-202ENST00000406134 Q8TAT8 98 aa7.63□□□□□ -1.19
MSH2-202ENST00000406134 TMEM190Q8WZ59 177 aa7.63□□□□□ -1.19
MSH2-202ENST00000406134 K7EP13 123 aa7.62□□□□□ -1.19
MSH2-202ENST00000406134 CHEK1O14757 476 aa7.62□□□□□ -1.19
MSH2-202ENST00000406134 FGF6P10767 208 aa7.62□□□□□ -1.19
MSH2-202ENST00000406134 IFI27P40305 119 aaPredicted RBP7.62□□□□□ -1.19
MSH2-202ENST00000406134 UBE2V1Q13404 147 aa7.62□□□□□ -1.19
MSH2-202ENST00000406134 PRR25Q96S07 402 aa7.62□□□□□ -1.19
MSH2-202ENST00000406134 PMCHL2Q9BQD1 86 aa7.62□□□□□ -1.19
MSH2-202ENST00000406134 ST20Q9HBF5 79 aa7.62□□□□□ -1.19
MSH2-202ENST00000406134 LINC01548A6NM66 108 aa7.62□□□□□ -1.19
MSH2-202ENST00000406134 GNG7O60262 68 aa7.62□□□□□ -1.19
MSH2-202ENST00000406134 PPBPP02775 128 aa7.62□□□□□ -1.19
MSH2-202ENST00000406134 VAMP3Q15836 100 aa7.62□□□□□ -1.19
MSH2-202ENST00000406134 C1orf122Q6ZSJ8 110 aa7.62□□□□□ -1.19
MSH2-202ENST00000406134 SIGLEC8Q9NYZ4 499 aa7.62□□□□□ -1.19
MSH2-202ENST00000406134 COX11Q9Y6N1 276 aa7.62□□□□□ -1.19
MSH2-202ENST00000406134 PRAC2D3DTV9 90 aa7.61□□□□□ -1.19
MSH2-202ENST00000406134 GOSR1O95249 250 aa7.61□□□□□ -1.19
MSH2-202ENST00000406134 MFAP4P55083 255 aa7.61□□□□□ -1.19
MSH2-202ENST00000406134 ERASQ7Z444 233 aa7.61□□□□□ -1.19
MSH2-202ENST00000406134 AMN1Q8IY45 258 aa7.61□□□□□ -1.19
MSH2-202ENST00000406134 ORAOV1Q8WV07 137 aa7.61□□□□□ -1.19
MSH2-202ENST00000406134 RNF185Q96GF1 192 aa7.61□□□□□ -1.19
MSH2-202ENST00000406134 C21orf62Q9NYP8 219 aa7.61□□□□□ -1.19
MSH2-202ENST00000406134 UTP20O75691 2785 aaKnown RBP7.61□□□□□ -1.19
MSH2-202ENST00000406134 CACNA1BQ00975 2339 aa7.61□□□□□ -1.19
MSH2-202ENST00000406134 ZNF469Q96JG9 3925 aaPredicted RBP7.61□□□□□ -1.19
MSH2-202ENST00000406134 HIVEP3Q5T1R4 2406 aa7.61□□□□□ -1.19
MSH2-202ENST00000406134 IGHV3OR16-8A0A075B7F1 116 aa7.61□□□□□ -1.19
MSH2-202ENST00000406134 D6R8Y8 96 aa7.61□□□□□ -1.19
MSH2-202ENST00000406134 CSN3P07498 182 aa7.61□□□□□ -1.19
MSH2-202ENST00000406134 CCDC140Q96MF4 163 aa7.61□□□□□ -1.19
MSH2-202ENST00000406134 ZNF502Q8TBZ5 544 aa7.61□□□□□ -1.19
MSH2-202ENST00000406134 RAXQ9Y2V3 346 aa7.61□□□□□ -1.19
MSH2-202ENST00000406134 TRAV30A0A087WSZ9 112 aa7.6□□□□□ -1.19
MSH2-202ENST00000406134 MUC21A0A0G2JKD1 596 aa7.6□□□□□ -1.19
MSH2-202ENST00000406134 MUC21A0A140T8X8 626 aa7.6□□□□□ -1.19
MSH2-202ENST00000406134 LINC01546A6NGU7 62 aa7.6□□□□□ -1.19
MSH2-202ENST00000406134 NHLH1Q02575 133 aa7.6□□□□□ -1.19
MSH2-202ENST00000406134 MRPL51Q4U2R6 128 aaKnown RBP7.6□□□□□ -1.19
MSH2-202ENST00000406134 MUC21Q5SSG8 566 aa7.6□□□□□ -1.19
MSH2-202ENST00000406134 FAM104BQ5XKR9 115 aa7.6□□□□□ -1.19
MSH2-202ENST00000406134 PET117Q6UWS5 81 aa7.6□□□□□ -1.19
MSH2-202ENST00000406134 WFDC12Q8WWY7 111 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms