RNA–Protein interactions for RNA: ENST00000405925.2

LIG4-202, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-202ENST00000405925 NUDT11Q96G61 164 aa7.14□□□□□ -1.27
LIG4-202ENST00000405925 VAMP8Q9BV40 100 aa7.14□□□□□ -1.27
LIG4-202ENST00000405925 I3L2K1 104 aa7.14□□□□□ -1.27
LIG4-202ENST00000405925 RPL35AP18077 110 aaKnown RBP7.14□□□□□ -1.27
LIG4-202ENST00000405925 ELOBQ15370 118 aa7.14□□□□□ -1.27
LIG4-202ENST00000405925 PRSS57Q6UWY2 283 aa7.14□□□□□ -1.27
LIG4-202ENST00000405925 KLK15Q9H2R5 256 aa7.14□□□□□ -1.27
LIG4-202ENST00000405925 GGTLC3B5MD39 225 aa7.13□□□□□ -1.27
LIG4-202ENST00000405925 H3BRN7 92 aa7.13□□□□□ -1.27
LIG4-202ENST00000405925 H3BVH4 76 aa7.13□□□□□ -1.27
LIG4-202ENST00000405925 ERCC8Q13216 396 aa7.13□□□□□ -1.27
LIG4-202ENST00000405925 SLC25A2Q9BXI2 301 aa7.13□□□□□ -1.27
LIG4-202ENST00000405925 VCANP13611 3396 aa7.13□□□□□ -1.27
LIG4-202ENST00000405925 TRGV2A0A075B6R0 118 aa7.13□□□□□ -1.27
LIG4-202ENST00000405925 HTN3P15516 51 aa7.13□□□□□ -1.27
LIG4-202ENST00000405925 DEFA6Q01524 100 aa7.13□□□□□ -1.27
LIG4-202ENST00000405925 SSBP4Q9BWG4 385 aaPredicted RBP7.13□□□□□ -1.27
LIG4-202ENST00000405925 TRBV9A0A0B4J1U6 114 aa7.13□□□□□ -1.27
LIG4-202ENST00000405925 TRAV12-3A0A0B4J271 114 aa7.13□□□□□ -1.27
LIG4-202ENST00000405925 IZUMO1RA6ND01 250 aa7.13□□□□□ -1.27
LIG4-202ENST00000405925 HOXD3P31249 432 aaPredicted RBP7.13□□□□□ -1.27
LIG4-202ENST00000405925 C1orf194Q5T5A4 169 aa7.13□□□□□ -1.27
LIG4-202ENST00000405925 C8orf86Q6ZUL3 223 aa7.13□□□□□ -1.27
LIG4-202ENST00000405925 MYOZ3Q8TDC0 251 aa7.13□□□□□ -1.27
LIG4-202ENST00000405925 CFHR4Q92496 578 aa7.13□□□□□ -1.27
LIG4-202ENST00000405925 MRPL36Q9P0J6 103 aaKnown RBP7.13□□□□□ -1.27
LIG4-202ENST00000405925 IGHG2P01859 326 aa7.12□□□□□ -1.27
LIG4-202ENST00000405925 P0C879 139 aa7.12□□□□□ -1.27
LIG4-202ENST00000405925 VWC2Q2TAL6 325 aa7.12□□□□□ -1.27
LIG4-202ENST00000405925 ZNF114Q8NC26 417 aa7.12□□□□□ -1.27
LIG4-202ENST00000405925 LINC00477Q96M19 166 aa7.12□□□□□ -1.27
LIG4-202ENST00000405925 MAP1LC3CQ9BXW4 147 aa7.12□□□□□ -1.27
LIG4-202ENST00000405925 GPR61Q9BZJ8 451 aa7.12□□□□□ -1.27
LIG4-202ENST00000405925 A6NDX4 124 aa7.12□□□□□ -1.27
LIG4-202ENST00000405925 NPIPB6E9PJ23 425 aa7.12□□□□□ -1.27
LIG4-202ENST00000405925 REC114Q7Z4M0 266 aa7.12□□□□□ -1.27
LIG4-202ENST00000405925 ZNF502Q8TBZ5 544 aa7.12□□□□□ -1.27
LIG4-202ENST00000405925 UBE2E2Q96LR5 201 aa7.12□□□□□ -1.27
LIG4-202ENST00000405925 TMEM191AQ9H0A3 160 aa7.12□□□□□ -1.27
LIG4-202ENST00000405925 VPS13AQ96RL7 3174 aa7.12□□□□□ -1.27
LIG4-202ENST00000405925 LINC01548A6NM66 108 aa7.12□□□□□ -1.27
LIG4-202ENST00000405925 LGALS1P09382 135 aaKnown RBP7.12□□□□□ -1.27
LIG4-202ENST00000405925 TSKUQ8WUA8 353 aa7.12□□□□□ -1.27
LIG4-202ENST00000405925 HSPB8Q9UJY1 196 aa7.12□□□□□ -1.27
LIG4-202ENST00000405925 CTSGP08311 255 aa7.11□□□□□ -1.27
LIG4-202ENST00000405925 ADCYAP1P18509 176 aa7.11□□□□□ -1.27
LIG4-202ENST00000405925 Q86TA4 180 aa7.11□□□□□ -1.27
LIG4-202ENST00000405925 AJUBAQ96IF1 538 aa7.11□□□□□ -1.27
LIG4-202ENST00000405925 PRELID3AQ96N28 172 aa7.11□□□□□ -1.27
LIG4-202ENST00000405925 IGKV1OR2-108A0A075B7D4 117 aa7.11□□□□□ -1.27
LIG4-202ENST00000405925 IGHV7-4-1A0A0J9YVY3 117 aa7.11□□□□□ -1.27
LIG4-202ENST00000405925 CMC4P56277 68 aaPredicted RBP7.11□□□□□ -1.27
LIG4-202ENST00000405925 PRR31Q5SQ13 230 aa7.11□□□□□ -1.27
LIG4-202ENST00000405925 AP5S1Q9NUS5 200 aa7.11□□□□□ -1.27
LIG4-202ENST00000405925 MRPL27Q9P0M9 148 aaKnown RBP7.11□□□□□ -1.27
LIG4-202ENST00000405925 HCFC1P51610 2035 aa7.11□□□□□ -1.27
LIG4-202ENST00000405925 NUDT3O95989 172 aa7.11□□□□□ -1.27
LIG4-202ENST00000405925 CRYGCP07315 174 aa7.11□□□□□ -1.27
LIG4-202ENST00000405925 FOXE3Q13461 319 aa7.11□□□□□ -1.27
LIG4-202ENST00000405925 FXYD5Q96DB9 178 aa7.11□□□□□ -1.27
LIG4-202ENST00000405925 FOLR2P14207 255 aa7.11□□□□□ -1.27
LIG4-202ENST00000405925 AMMECR1LQ6DCA0 310 aa7.11□□□□□ -1.27
LIG4-202ENST00000405925 C17orf77Q96MU5 243 aa7.11□□□□□ -1.27
LIG4-202ENST00000405925 FANCD2OSQ96PS1 177 aa7.11□□□□□ -1.27
LIG4-202ENST00000405925 KIR2DL4Q99706 377 aa7.11□□□□□ -1.27
LIG4-202ENST00000405925 TNRC18O15417 2968 aaPredicted RBP7.1□□□□□ -1.27
LIG4-202ENST00000405925 CCL24O00175 119 aa7.1□□□□□ -1.27
LIG4-202ENST00000405925 SH2D1AO60880 128 aa7.1□□□□□ -1.27
LIG4-202ENST00000405925 LEPROTL1O95214 131 aa7.1□□□□□ -1.27
LIG4-202ENST00000405925 EIF4EBP1Q13541 118 aaPredicted RBP7.1□□□□□ -1.27
LIG4-202ENST00000405925 TMEM190Q8WZ59 177 aa7.1□□□□□ -1.27
LIG4-202ENST00000405925 SMPXQ9UHP9 88 aa7.1□□□□□ -1.27
LIG4-202ENST00000405925 TSSC4Q9Y5U2 329 aaPredicted RBP7.1□□□□□ -1.27
LIG4-202ENST00000405925 DNAJC9-AS1A6NH13 148 aa7.1□□□□□ -1.27
LIG4-202ENST00000405925 SLURP1P55000 103 aa7.1□□□□□ -1.27
LIG4-202ENST00000405925 SPINK13Q1W4C9 94 aa7.1□□□□□ -1.27
LIG4-202ENST00000405925 ZNF295-AS1Q8N0V1 137 aa7.1□□□□□ -1.27
LIG4-202ENST00000405925 MEGF9Q9H1U4 602 aa7.1□□□□□ -1.27
LIG4-202ENST00000405925 TANC2Q9HCD6 1990 aa7.1□□□□□ -1.27
LIG4-202ENST00000405925 DSPP15924 2871 aaKnown RBP7.1□□□□□ -1.27
LIG4-202ENST00000405925 TRAV9-1A0A075B6T8 112 aa7.1□□□□□ -1.27
LIG4-202ENST00000405925 HLA-DMBP28068 263 aa7.1□□□□□ -1.27
LIG4-202ENST00000405925 MORN5Q5VZ52 161 aa7.1□□□□□ -1.27
LIG4-202ENST00000405925 ORMDL3Q8N138 153 aa7.1□□□□□ -1.27
LIG4-202ENST00000405925 TMEM14CQ9P0S9 112 aa7.1□□□□□ -1.27
LIG4-202ENST00000405925 H7C1H1 209 aa7.09□□□□□ -1.27
LIG4-202ENST00000405925 TNFRSF18Q9Y5U5 241 aa7.09□□□□□ -1.27
LIG4-202ENST00000405925 TRGV11A0A075B6L2 103 aa7.09□□□□□ -1.27
LIG4-202ENST00000405925 DIRC3C9JPN6 131 aa7.09□□□□□ -1.27
LIG4-202ENST00000405925 INS-IGF2F8WCM5 200 aa7.09□□□□□ -1.27
LIG4-202ENST00000405925 LY6LH3BQJ8 138 aa7.09□□□□□ -1.27
LIG4-202ENST00000405925 PRO1933Q9H354 126 aa7.09□□□□□ -1.27
LIG4-202ENST00000405925 A0A1B0GW15 77 aa7.09□□□□□ -1.27
LIG4-202ENST00000405925 INAFM1C9JVW0 142 aa7.09□□□□□ -1.27
LIG4-202ENST00000405925 G0S2P27469 103 aa7.09□□□□□ -1.27
LIG4-202ENST00000405925 TCTAP57738 103 aa7.09□□□□□ -1.27
LIG4-202ENST00000405925 PATE2Q6UY27 113 aa7.09□□□□□ -1.27
LIG4-202ENST00000405925 TMEM170AQ8WVE7 144 aa7.09□□□□□ -1.27
LIG4-202ENST00000405925 XCL2Q9UBD3 114 aa7.09□□□□□ -1.27
LIG4-202ENST00000405925 F8P00451 2351 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms