RNA–Protein interactions for RNA: ENST00000398568.6

CYLD-202, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYLD, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-202ENST00000398568 C8orf46Q8TAG6 207 aa11.97□□□□□ -0.49
CYLD-202ENST00000398568 KLF14Q8TD94 323 aaPredicted RBP11.97□□□□□ -0.49
CYLD-202ENST00000398568 HOXA3O43365 443 aaPredicted RBP11.96□□□□□ -0.49
CYLD-202ENST00000398568 FSTL3O95633 263 aa11.96□□□□□ -0.49
CYLD-202ENST00000398568 SAA1P0DJI8 122 aaPredicted RBP11.96□□□□□ -0.49
CYLD-202ENST00000398568 ARL3P36405 182 aa11.96□□□□□ -0.49
CYLD-202ENST00000398568 ODF1Q14990 250 aa11.96□□□□□ -0.49
CYLD-202ENST00000398568 Q6ZS92 163 aa11.96□□□□□ -0.49
CYLD-202ENST00000398568 TMEM160Q9NX00 188 aa11.96□□□□□ -0.49
CYLD-202ENST00000398568 HHLA3Q9XRX5 114 aa11.96□□□□□ -0.49
CYLD-202ENST00000398568 VSTM5A8MXK1 200 aa11.96□□□□□ -0.5
CYLD-202ENST00000398568 MRPL51Q4U2R6 128 aaKnown RBP11.96□□□□□ -0.5
CYLD-202ENST00000398568 WI2-2373I1.2A0A1W2PRP0 233 aa11.95□□□□□ -0.5
CYLD-202ENST00000398568 TMEM213A2RRL7 107 aa11.95□□□□□ -0.5
CYLD-202ENST00000398568 PINLYPA6NC86 204 aa11.95□□□□□ -0.5
CYLD-202ENST00000398568 PSMB2P49721 201 aa11.95□□□□□ -0.5
CYLD-202ENST00000398568 U3KQK5 164 aa11.95□□□□□ -0.5
CYLD-202ENST00000398568 LEPP41159 167 aa11.95□□□□□ -0.5
CYLD-202ENST00000398568 TMSB15BA0A087X1C1 80 aa11.95□□□□□ -0.5
CYLD-202ENST00000398568 LOC107984156A0A0G2JMH3 177 aa11.95□□□□□ -0.5
CYLD-202ENST00000398568 FAM90A27PA6NNH2 459 aa11.95□□□□□ -0.5
CYLD-202ENST00000398568 IGKV1-16P04430 117 aa11.95□□□□□ -0.5
CYLD-202ENST00000398568 DEFB109BQ30KR1 87 aa11.95□□□□□ -0.5
CYLD-202ENST00000398568 CFAP126Q5VTH2 177 aa11.95□□□□□ -0.5
CYLD-202ENST00000398568 LYZL1Q6UWQ5 148 aa11.95□□□□□ -0.5
CYLD-202ENST00000398568 ARL17AQ8IVW1 177 aa11.95□□□□□ -0.5
CYLD-202ENST00000398568 SRSF8Q9BRL6 282 aaKnown RBP11.95□□□□□ -0.5
CYLD-202ENST00000398568 MAP1LC3AQ9H492 121 aa11.95□□□□□ -0.5
CYLD-202ENST00000398568 IGKV1D-37A0A075B6S9 117 aa11.94□□□□□ -0.5
CYLD-202ENST00000398568 TMEM262E9PQX1 116 aa11.94□□□□□ -0.5
CYLD-202ENST00000398568 SMKR1H3BMG3 65 aa11.94□□□□□ -0.5
CYLD-202ENST00000398568 ATP5LO75964 103 aa11.94□□□□□ -0.5
CYLD-202ENST00000398568 NFE4Q86UQ8 179 aa11.94□□□□□ -0.5
CYLD-202ENST00000398568 THAP8Q8NA92 274 aa11.94□□□□□ -0.5
CYLD-202ENST00000398568 SPRY4Q9C004 299 aa11.94□□□□□ -0.5
CYLD-202ENST00000398568 NPYP01303 97 aa11.94□□□□□ -0.5
CYLD-202ENST00000398568 GAGE12JA6NER3 117 aa11.94□□□□□ -0.5
CYLD-202ENST00000398568 GAGE7O76087 117 aa11.94□□□□□ -0.5
CYLD-202ENST00000398568 GAGE12FP0CL80 117 aa11.94□□□□□ -0.5
CYLD-202ENST00000398568 GAGE12GP0CL81 117 aa11.94□□□□□ -0.5
CYLD-202ENST00000398568 GAGE12IP0CL82 117 aa11.94□□□□□ -0.5
CYLD-202ENST00000398568 GAGE4Q13068 117 aa11.94□□□□□ -0.5
CYLD-202ENST00000398568 ZCCHC24Q8N2G6 241 aaKnown RBP11.94□□□□□ -0.5
CYLD-202ENST00000398568 RPEQ96AT9 228 aa11.94□□□□□ -0.5
CYLD-202ENST00000398568 NDUFA4L2Q9NRX3 87 aa11.94□□□□□ -0.5
CYLD-202ENST00000398568 TMEM8BA6NDV4 472 aa11.93□□□□□ -0.5
CYLD-202ENST00000398568 NCBP2LA6PVI3 153 aaKnown RBP11.93□□□□□ -0.5
CYLD-202ENST00000398568 HLA-DRB4P13762 266 aa11.93□□□□□ -0.5
CYLD-202ENST00000398568 RPL32P62910 135 aaKnown RBP11.93□□□□□ -0.5
CYLD-202ENST00000398568 EXOC3-AS1Q8N2X6 119 aa11.93□□□□□ -0.5
CYLD-202ENST00000398568 HARBI1Q96MB7 349 aa11.93□□□□□ -0.5
CYLD-202ENST00000398568 HLA-DRB4X5D2U9 266 aa11.93□□□□□ -0.5
CYLD-202ENST00000398568 GP9P14770 177 aa11.93□□□□□ -0.5
CYLD-202ENST00000398568 UTF1Q5T230 341 aa11.93□□□□□ -0.5
CYLD-202ENST00000398568 LYRM7Q5U5X0 104 aa11.93□□□□□ -0.5
CYLD-202ENST00000398568 ZNRF1Q8ND25 227 aa11.93□□□□□ -0.5
CYLD-202ENST00000398568 ZMAT4Q9H898 229 aa11.93□□□□□ -0.5
CYLD-202ENST00000398568 SPENQ96T58 3664 aaKnown RBP11.93□□□□□ -0.5
CYLD-202ENST00000398568 CCL11P51671 97 aa11.93□□□□□ -0.5
CYLD-202ENST00000398568 IGHV3OR15-7A0A075B7D8 119 aa11.92□□□□□ -0.5
CYLD-202ENST00000398568 LINC01559Q495D7 138 aa11.92□□□□□ -0.5
CYLD-202ENST00000398568 TTC32Q5I0X7 151 aa11.92□□□□□ -0.5
CYLD-202ENST00000398568 ZNF688P0C7X2 276 aa11.92□□□□□ -0.5
CYLD-202ENST00000398568 GAGE2BQ13066 116 aa11.92□□□□□ -0.5
CYLD-202ENST00000398568 ANXA2RQ3ZCQ2 193 aa11.92□□□□□ -0.5
CYLD-202ENST00000398568 GAGE2EQ4V326 116 aa11.92□□□□□ -0.5
CYLD-202ENST00000398568 MAPKAPK5-AS1Q8N8E1 139 aa11.92□□□□□ -0.5
CYLD-202ENST00000398568 ASCL2Q99929 193 aa11.92□□□□□ -0.5
CYLD-202ENST00000398568 GAGE2DQ9UEU5 116 aa11.92□□□□□ -0.5
CYLD-202ENST00000398568 RELNP78509 3460 aa11.91□□□□□ -0.5
CYLD-202ENST00000398568 OVOL3O00110 214 aa11.91□□□□□ -0.5
CYLD-202ENST00000398568 MAGEA5P43359 124 aa11.91□□□□□ -0.5
CYLD-202ENST00000398568 FHL3Q13643 280 aa11.91□□□□□ -0.5
CYLD-202ENST00000398568 IGKV1D-17A0A075B6S4 117 aa11.91□□□□□ -0.5
CYLD-202ENST00000398568 TRAV40A0A0B4J280 105 aa11.91□□□□□ -0.5
CYLD-202ENST00000398568 SMCPP49901 116 aaPredicted RBP11.91□□□□□ -0.5
CYLD-202ENST00000398568 MZT1Q08AG7 82 aa11.91□□□□□ -0.5
CYLD-202ENST00000398568 TEN1Q86WV5 123 aa11.91□□□□□ -0.5
CYLD-202ENST00000398568 PTH2Q96A98 100 aa11.91□□□□□ -0.5
CYLD-202ENST00000398568 HIGD1AQ9Y241 93 aa11.91□□□□□ -0.5
CYLD-202ENST00000398568 COL12A1Q99715 3063 aa11.91□□□□□ -0.5
CYLD-202ENST00000398568 PAX8Q06710 450 aa11.91□□□□□ -0.5
CYLD-202ENST00000398568 SPINK14Q6IE38 97 aa11.91□□□□□ -0.5
CYLD-202ENST00000398568 MOGAT3Q86VF5 341 aa11.91□□□□□ -0.5
CYLD-202ENST00000398568 OR10X1Q8NGY0 326 aa11.91□□□□□ -0.5
CYLD-202ENST00000398568 MRPL36Q9P0J6 103 aaKnown RBP11.91□□□□□ -0.5
CYLD-202ENST00000398568 IGLV2-11P01706 119 aa11.9□□□□□ -0.5
CYLD-202ENST00000398568 Q71RC1 249 aaPredicted RBP11.9□□□□□ -0.5
CYLD-202ENST00000398568 TMEM158Q8WZ71 300 aa11.9□□□□□ -0.5
CYLD-202ENST00000398568 SFTA2Q6UW10 78 aa11.9□□□□□ -0.5
CYLD-202ENST00000398568 C1orf122Q6ZSJ8 110 aa11.9□□□□□ -0.5
CYLD-202ENST00000398568 AGRNO00468 2067 aa11.9□□□□□ -0.5
CYLD-202ENST00000398568 H3BVH4 76 aa11.9□□□□□ -0.51
CYLD-202ENST00000398568 RITA1Q96K30 269 aa11.9□□□□□ -0.51
CYLD-202ENST00000398568 CHD6Q8TD26 2715 aa11.9□□□□□ -0.51
CYLD-202ENST00000398568 SNCGO76070 127 aa11.89□□□□□ -0.51
CYLD-202ENST00000398568 RAX2Q96IS3 184 aa11.89□□□□□ -0.51
CYLD-202ENST00000398568 A8MWV9 139 aa11.89□□□□□ -0.51
CYLD-202ENST00000398568 RBP4P02753 201 aa11.89□□□□□ -0.51
CYLD-202ENST00000398568 TNFRSF1AP19438 455 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms