RNA–Protein interactions for RNA: ENST00000397938.6

EWSR1-206, Transcript of EWS RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EWSR1, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-206ENST00000397938 GCSHP23434 173 aa13.58□□□□□ -0.24
EWSR1-206ENST00000397938 BCL6BQ8N143 479 aaPredicted RBP13.58□□□□□ -0.24
EWSR1-206ENST00000397938 C18orf15Q96N68 181 aa13.58□□□□□ -0.24
EWSR1-206ENST00000397938 ZMAT4Q9H898 229 aa13.58□□□□□ -0.24
EWSR1-206ENST00000397938 IGKV2-40A0A087WW87 121 aaPredicted RBP13.57□□□□□ -0.24
EWSR1-206ENST00000397938 IGKV2D-40P01614 121 aaPredicted RBP13.57□□□□□ -0.24
EWSR1-206ENST00000397938 IGLC6P0CF74 106 aa13.57□□□□□ -0.24
EWSR1-206ENST00000397938 ODF1Q14990 250 aa13.57□□□□□ -0.24
EWSR1-206ENST00000397938 PRR25Q96S07 402 aa13.57□□□□□ -0.24
EWSR1-206ENST00000397938 CNIH1O95406 144 aa13.57□□□□□ -0.24
EWSR1-206ENST00000397938 MAP1LC3AQ9H492 121 aa13.57□□□□□ -0.24
EWSR1-206ENST00000397938 C16orf97H3BN30 126 aa13.57□□□□□ -0.24
EWSR1-206ENST00000397938 S100A7AQ86SG5 101 aa13.57□□□□□ -0.24
EWSR1-206ENST00000397938 RPEQ96AT9 228 aa13.57□□□□□ -0.24
EWSR1-206ENST00000397938 RNF5Q99942 180 aa13.57□□□□□ -0.24
EWSR1-206ENST00000397938 CHAC1Q9BUX1 264 aa13.57□□□□□ -0.24
EWSR1-206ENST00000397938 HHLA3Q9XRX5 114 aa13.57□□□□□ -0.24
EWSR1-206ENST00000397938 ROS1P08922 2347 aa13.56□□□□□ -0.24
EWSR1-206ENST00000397938 RNASE6Q93091 150 aaKnown RBP13.56□□□□□ -0.24
EWSR1-206ENST00000397938 RNF185Q96GF1 192 aa13.56□□□□□ -0.24
EWSR1-206ENST00000397938 RAB1BQ9H0U4 201 aa13.56□□□□□ -0.24
EWSR1-206ENST00000397938 CHTOPQ9Y3Y2 248 aaKnown RBP13.56□□□□□ -0.24
EWSR1-206ENST00000397938 TEX48A0A1B0GUV7 120 aa13.55□□□□□ -0.24
EWSR1-206ENST00000397938 COX7A1P24310 79 aa13.55□□□□□ -0.24
EWSR1-206ENST00000397938 ZNF80P51504 273 aaPredicted RBP13.55□□□□□ -0.24
EWSR1-206ENST00000397938 ZNF562Q6V9R5 426 aa13.55□□□□□ -0.24
EWSR1-206ENST00000397938 TTTY13Q9BZ97 58 aa13.55□□□□□ -0.24
EWSR1-206ENST00000397938 FCER1GP30273 86 aa13.55□□□□□ -0.24
EWSR1-206ENST00000397938 LEPP41159 167 aa13.55□□□□□ -0.24
EWSR1-206ENST00000397938 IGFL3Q6UXB1 125 aa13.55□□□□□ -0.24
EWSR1-206ENST00000397938 PHLDA1Q8WV24 401 aaPredicted RBP13.55□□□□□ -0.24
EWSR1-206ENST00000397938 RALYQ9UKM9 306 aaKnown RBP13.55□□□□□ -0.24
EWSR1-206ENST00000397938 S4R3C0 116 aa13.55□□□□□ -0.24
EWSR1-206ENST00000397938 BOD1L1Q8NFC6 3051 aa13.54□□□□□ -0.24
EWSR1-206ENST00000397938 GNG7O60262 68 aa13.54□□□□□ -0.24
EWSR1-206ENST00000397938 BMI1P35226 326 aa13.54□□□□□ -0.24
EWSR1-206ENST00000397938 GFRALQ6UXV0 394 aa13.54□□□□□ -0.24
EWSR1-206ENST00000397938 ZNF575Q86XF7 245 aa13.54□□□□□ -0.24
EWSR1-206ENST00000397938 FAM57AQ8TBR7 257 aa13.54□□□□□ -0.24
EWSR1-206ENST00000397938 K7ERJ3 54 aa13.54□□□□□ -0.24
EWSR1-206ENST00000397938 RPL24P83731 157 aaKnown RBP13.54□□□□□ -0.24
EWSR1-206ENST00000397938 Q8TAT8 98 aa13.54□□□□□ -0.24
EWSR1-206ENST00000397938 DYNLRB1Q9NP97 96 aa13.54□□□□□ -0.24
EWSR1-206ENST00000397938 A0A1W2PRD5 423 aa13.53□□□□□ -0.24
EWSR1-206ENST00000397938 A0A1W2PRF3 423 aa13.53□□□□□ -0.24
EWSR1-206ENST00000397938 A0A1W2PRM7 423 aa13.53□□□□□ -0.24
EWSR1-206ENST00000397938 CIDEAO60543 219 aa13.53□□□□□ -0.24
EWSR1-206ENST00000397938 IGKCP01834 107 aa13.53□□□□□ -0.24
EWSR1-206ENST00000397938 Q6ZS92 163 aa13.53□□□□□ -0.24
EWSR1-206ENST00000397938 CNFNQ9BYD5 112 aa13.53□□□□□ -0.24
EWSR1-206ENST00000397938 VSTM5A8MXK1 200 aa13.53□□□□□ -0.24
EWSR1-206ENST00000397938 GAS8-AS1O95177 125 aa13.53□□□□□ -0.24
EWSR1-206ENST00000397938 EVI2AP22794 236 aa13.53□□□□□ -0.24
EWSR1-206ENST00000397938 KLF17Q5JT82 389 aaPredicted RBP13.53□□□□□ -0.24
EWSR1-206ENST00000397938 SAMD13Q5VXD3 122 aa13.53□□□□□ -0.24
EWSR1-206ENST00000397938 ZGRF1Q86YA3 2104 aa13.53□□□□□ -0.24
EWSR1-206ENST00000397938 VGLL1Q99990 258 aa13.53□□□□□ -0.24
EWSR1-206ENST00000397938 NXT2Q9NPJ8 142 aaKnown RBP13.53□□□□□ -0.24
EWSR1-206ENST00000397938 MSRB1Q9NZV6 116 aa13.53□□□□□ -0.24
EWSR1-206ENST00000397938 TRBV25-1A0A075B6N4 114 aa13.52□□□□□ -0.24
EWSR1-206ENST00000397938 NPIPB5A8MRT5 1133 aa13.52□□□□□ -0.24
EWSR1-206ENST00000397938 LY6LH3BQJ8 138 aa13.52□□□□□ -0.24
EWSR1-206ENST00000397938 SRSF2Q01130 221 aaKnown RBP13.52□□□□□ -0.24
EWSR1-206ENST00000397938 PSMG3-AS1Q96PY0 264 aa13.52□□□□□ -0.24
EWSR1-206ENST00000397938 CUL9Q8IWT3 2517 aa13.52□□□□□ -0.24
EWSR1-206ENST00000397938 PKDREJQ9NTG1 2253 aa13.52□□□□□ -0.25
EWSR1-206ENST00000397938 ZZEF1O43149 2961 aa13.52□□□□□ -0.25
EWSR1-206ENST00000397938 PPIAL4CA0A0B4J2A2 164 aa13.52□□□□□ -0.25
EWSR1-206ENST00000397938 PPIAL4GP0DN37 164 aa13.52□□□□□ -0.25
EWSR1-206ENST00000397938 LINC01559Q495D7 138 aa13.52□□□□□ -0.25
EWSR1-206ENST00000397938 TM2D2Q9BX73 214 aa13.52□□□□□ -0.25
EWSR1-206ENST00000397938 RP1L1Q8IWN7 2480 aaPredicted RBP13.51□□□□□ -0.25
EWSR1-206ENST00000397938 A0A0G2JNJ9 132 aa13.51□□□□□ -0.25
EWSR1-206ENST00000397938 TNFRSF6BO95407 300 aa13.51□□□□□ -0.25
EWSR1-206ENST00000397938 PRSS1P07477 247 aa13.51□□□□□ -0.25
EWSR1-206ENST00000397938 Q9UFV3 132 aa13.51□□□□□ -0.25
EWSR1-206ENST00000397938 TIMM23O14925 209 aa13.51□□□□□ -0.25
EWSR1-206ENST00000397938 HLA-DRB4P13762 266 aa13.51□□□□□ -0.25
EWSR1-206ENST00000397938 RPL7P18124 248 aaKnown RBP13.51□□□□□ -0.25
EWSR1-206ENST00000397938 ZNF48Q96MX3 618 aaPredicted RBP13.51□□□□□ -0.25
EWSR1-206ENST00000397938 HLA-DRB4X5D2U9 266 aa13.51□□□□□ -0.25
EWSR1-206ENST00000397938 MFAP4P55083 255 aa13.5□□□□□ -0.25
EWSR1-206ENST00000397938 GTSCR1Q86UQ5 136 aa13.5□□□□□ -0.25
EWSR1-206ENST00000397938 CEND1Q8N111 149 aa13.5□□□□□ -0.25
EWSR1-206ENST00000397938 FOXC2Q99958 501 aa13.5□□□□□ -0.25
EWSR1-206ENST00000397938 NHP2Q9NX24 153 aaKnown RBP13.5□□□□□ -0.25
EWSR1-206ENST00000397938 SMPXQ9UHP9 88 aa13.5□□□□□ -0.25
EWSR1-206ENST00000397938 F8W735 103 aaPredicted RBP13.5□□□□□ -0.25
EWSR1-206ENST00000397938 DPM2O94777 84 aa13.5□□□□□ -0.25
EWSR1-206ENST00000397938 NBR2O15453 112 aa13.49□□□□□ -0.25
EWSR1-206ENST00000397938 ATP5LO75964 103 aa13.49□□□□□ -0.25
EWSR1-206ENST00000397938 FTH1P19P0C7X4 201 aa13.49□□□□□ -0.25
EWSR1-206ENST00000397938 FANCD2OSQ96PS1 177 aa13.49□□□□□ -0.25
EWSR1-206ENST00000397938 IGLV11-55A0A075B6I3 123 aa13.49□□□□□ -0.25
EWSR1-206ENST00000397938 ORM1P02763 201 aa13.49□□□□□ -0.25
EWSR1-206ENST00000397938 ZC2HC1BQ5TFG8 222 aa13.49□□□□□ -0.25
EWSR1-206ENST00000397938 TMEM158Q8WZ71 300 aa13.49□□□□□ -0.25
EWSR1-206ENST00000397938 E9PLD3 99 aa13.48□□□□□ -0.25
EWSR1-206ENST00000397938 IGHG4P01861 327 aa13.48□□□□□ -0.25
EWSR1-206ENST00000397938 SRSF1Q07955 248 aaKnown RBP eCLIP13.48□□□□□ -0.254e-9■■■□□ 18.9
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms