RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 KLF12Q9Y4X4 402 aa12.49□□□□□ -0.41
GNE-202ENST00000396594 TRAV8-4A0A0B4J246 113 aa12.48□□□□□ -0.41
GNE-202ENST00000396594 ZNF134P52741 427 aa12.48□□□□□ -0.41
GNE-202ENST00000396594 RHOHQ15669 191 aa12.48□□□□□ -0.41
GNE-202ENST00000396594 C11orf68Q9H3H3 251 aaKnown RBP12.48□□□□□ -0.41
GNE-202ENST00000396594 EVI2AP22794 236 aa12.48□□□□□ -0.41
GNE-202ENST00000396594 CST9LQ9H4G1 147 aa12.48□□□□□ -0.41
GNE-202ENST00000396594 MUC21A0A0G2JKD1 596 aa12.48□□□□□ -0.41
GNE-202ENST00000396594 MUC21A0A140T8X8 626 aa12.48□□□□□ -0.41
GNE-202ENST00000396594 LINC00527Q9UJ94 153 aa12.48□□□□□ -0.41
GNE-202ENST00000396594 LTBP2Q14767 1821 aa12.48□□□□□ -0.41
GNE-202ENST00000396594 LOC105371267A0A1B0GV96 52 aa12.48□□□□□ -0.41
GNE-202ENST00000396594 PRR25Q96S07 402 aa12.48□□□□□ -0.41
GNE-202ENST00000396594 PSCAO43653 123 aa12.47□□□□□ -0.41
GNE-202ENST00000396594 HOXB4P17483 251 aaPredicted RBP12.47□□□□□ -0.41
GNE-202ENST00000396594 C9orf66Q5T8R8 295 aa12.47□□□□□ -0.41
GNE-202ENST00000396594 LRRC75A-AS1Q8N1F1 130 aa12.47□□□□□ -0.41
GNE-202ENST00000396594 IGLC1P0CG04 106 aa12.47□□□□□ -0.41
GNE-202ENST00000396594 PMVKQ15126 192 aa12.47□□□□□ -0.41
GNE-202ENST00000396594 ZNF493Q6ZR52 646 aa12.47□□□□□ -0.41
GNE-202ENST00000396594 SPAG8Q99932 426 aaPredicted RBP12.47□□□□□ -0.41
GNE-202ENST00000396594 SMIM27A0A1W2PRY6 76 aa12.47□□□□□ -0.41
GNE-202ENST00000396594 PAX9P55771 341 aa12.47□□□□□ -0.41
GNE-202ENST00000396594 AMN1Q8IY45 258 aa12.47□□□□□ -0.41
GNE-202ENST00000396594 H3BQ85 93 aa12.46□□□□□ -0.41
GNE-202ENST00000396594 H3BUT2 72 aa12.46□□□□□ -0.41
GNE-202ENST00000396594 CXCL1P09341 107 aa12.46□□□□□ -0.41
GNE-202ENST00000396594 SAMD5Q5TGI4 173 aa12.46□□□□□ -0.41
GNE-202ENST00000396594 TMEM243Q9BU79 118 aa12.46□□□□□ -0.41
GNE-202ENST00000396594 CDK2AP2O75956 126 aa12.46□□□□□ -0.41
GNE-202ENST00000396594 GAGE13Q4V321 117 aa12.46□□□□□ -0.41
GNE-202ENST00000396594 WIPF2Q8TF74 440 aaPredicted RBP12.46□□□□□ -0.41
GNE-202ENST00000396594 CD300EQ496F6 205 aaPredicted RBP12.46□□□□□ -0.42
GNE-202ENST00000396594 PRR30Q53SZ7 412 aaPredicted RBP12.46□□□□□ -0.42
GNE-202ENST00000396594 FREM3P0C091 2139 aa12.46□□□□□ -0.42
GNE-202ENST00000396594 TCTEX1D4Q5JR98 221 aa12.46□□□□□ -0.42
GNE-202ENST00000396594 C14orf178Q8N769 122 aaPredicted RBP12.46□□□□□ -0.42
GNE-202ENST00000396594 DLX4Q92988 240 aaPredicted RBP12.46□□□□□ -0.42
GNE-202ENST00000396594 SPRY4Q9C004 299 aa12.46□□□□□ -0.42
GNE-202ENST00000396594 RPL35AP18077 110 aaKnown RBP12.45□□□□□ -0.42
GNE-202ENST00000396594 PPIFP30405 207 aaKnown RBP12.45□□□□□ -0.42
GNE-202ENST00000396594 PRR20EP86478 221 aa12.45□□□□□ -0.42
GNE-202ENST00000396594 PRR20CP86479 221 aa12.45□□□□□ -0.42
GNE-202ENST00000396594 PRR20DP86480 221 aa12.45□□□□□ -0.42
GNE-202ENST00000396594 PRR20BP86481 221 aa12.45□□□□□ -0.42
GNE-202ENST00000396594 PRR20AP86496 221 aa12.45□□□□□ -0.42
GNE-202ENST00000396594 TCF15Q12870 199 aa12.45□□□□□ -0.42
GNE-202ENST00000396594 RSPO1Q2MKA7 263 aaPredicted RBP12.45□□□□□ -0.42
GNE-202ENST00000396594 NDPQ00604 133 aa12.45□□□□□ -0.42
GNE-202ENST00000396594 ZNF48Q96MX3 618 aaPredicted RBP12.45□□□□□ -0.42
GNE-202ENST00000396594 C10orf91Q5T1B1 145 aa12.45□□□□□ -0.42
GNE-202ENST00000396594 C20orf144Q9BQM9 153 aa12.45□□□□□ -0.42
GNE-202ENST00000396594 K7EMT4 169 aa12.45□□□□□ -0.42
GNE-202ENST00000396594 TRBV20-1A0A075B6N2 111 aa12.44□□□□□ -0.42
GNE-202ENST00000396594 A8MWP6 167 aa12.44□□□□□ -0.42
GNE-202ENST00000396594 H3BMM0 161 aa12.44□□□□□ -0.42
GNE-202ENST00000396594 RUSC1-AS1Q66K80 236 aa12.44□□□□□ -0.42
GNE-202ENST00000396594 LGALS9BQ3B8N2 356 aa12.44□□□□□ -0.42
GNE-202ENST00000396594 LGALS9CQ6DKI2 356 aa12.44□□□□□ -0.42
GNE-202ENST00000396594 ZMAT4Q9H898 229 aa12.44□□□□□ -0.42
GNE-202ENST00000396594 TRAV8-2A0A0B4J237 113 aa12.44□□□□□ -0.42
GNE-202ENST00000396594 PAX4O43316 350 aa12.44□□□□□ -0.42
GNE-202ENST00000396594 RP1L1Q8IWN7 2480 aaPredicted RBP12.44□□□□□ -0.42
GNE-202ENST00000396594 WISP1O95388 367 aa12.44□□□□□ -0.42
GNE-202ENST00000396594 INAFM2P0DMQ5 153 aa12.44□□□□□ -0.42
GNE-202ENST00000396594 MED14OSP0DP75 135 aa12.44□□□□□ -0.42
GNE-202ENST00000396594 HERVK_113P63121 156 aa12.44□□□□□ -0.42
GNE-202ENST00000396594 LHFPL4Q7Z7J7 247 aa12.44□□□□□ -0.42
GNE-202ENST00000396594 CD5LO43866 347 aa12.43□□□□□ -0.42
GNE-202ENST00000396594 AZU1P20160 251 aa12.43□□□□□ -0.42
GNE-202ENST00000396594 TRIOBPQ9H2D6 2365 aa12.43□□□□□ -0.42
GNE-202ENST00000396594 Q8TAT8 98 aa12.43□□□□□ -0.42
GNE-202ENST00000396594 VOPP1Q96AW1 172 aa12.43□□□□□ -0.42
GNE-202ENST00000396594 IGKV1-39P01597 117 aa12.42□□□□□ -0.42
GNE-202ENST00000396594 IGKV1D-39P04432 117 aa12.42□□□□□ -0.42
GNE-202ENST00000396594 WT1-ASQ06250 92 aa12.42□□□□□ -0.42
GNE-202ENST00000396594 MAP1BP46821 2468 aaKnown RBP12.42□□□□□ -0.42
GNE-202ENST00000396594 CENPVL3A0A0U1RRI6 287 aa12.42□□□□□ -0.42
GNE-202ENST00000396594 C22orf46C9J442 243 aa12.42□□□□□ -0.42
GNE-202ENST00000396594 SIVA1O15304 175 aa12.42□□□□□ -0.42
GNE-202ENST00000396594 PRB3Q04118 309 aaPredicted RBP12.42□□□□□ -0.42
GNE-202ENST00000396594 PRIMA1Q86XR5 153 aa12.42□□□□□ -0.42
GNE-202ENST00000396594 C3orf79P0CE67 100 aa12.41□□□□□ -0.42
GNE-202ENST00000396594 LTAP01374 205 aa12.41□□□□□ -0.42
GNE-202ENST00000396594 RNF144BQ7Z419 303 aa12.41□□□□□ -0.42
GNE-202ENST00000396594 SPTBP11277 2137 aa12.41□□□□□ -0.42
GNE-202ENST00000396594 FANCMQ8IYD8 2048 aa12.41□□□□□ -0.42
GNE-202ENST00000396594 TRBV6-1A0A0K0K1D8 114 aa12.41□□□□□ -0.42
GNE-202ENST00000396594 C10orf105Q8TEF2 133 aa12.41□□□□□ -0.42
GNE-202ENST00000396594 NCR2O95944 276 aa12.41□□□□□ -0.42
GNE-202ENST00000396594 ZNF561-AS1K7EIQ3 104 aa12.4□□□□□ -0.42
GNE-202ENST00000396594 IL15RAQ13261 267 aa12.4□□□□□ -0.42
GNE-202ENST00000396594 DEFB121Q5J5C9 76 aa12.4□□□□□ -0.42
GNE-202ENST00000396594 C1orf159Q96HA4 380 aa12.4□□□□□ -0.42
GNE-202ENST00000396594 IGHV1-24A0A0C4DH33 117 aa12.4□□□□□ -0.42
GNE-202ENST00000396594 C11orf53Q8IXP5 236 aa12.4□□□□□ -0.42
GNE-202ENST00000396594 FXYD5Q96DB9 178 aa12.4□□□□□ -0.42
GNE-202ENST00000396594 ARID1AO14497 2285 aa12.4□□□□□ -0.42
GNE-202ENST00000396594 ESDP10768 282 aa12.4□□□□□ -0.42
GNE-202ENST00000396594 GUSBP1Q15486 140 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms