RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 NHLH2Q02577 135 aa12.9□□□□□ -0.34
FXN-203ENST00000396366 GCSAMLQ5JQS6 135 aa12.9□□□□□ -0.34
FXN-203ENST00000396366 STX12Q86Y82 276 aa12.9□□□□□ -0.34
FXN-203ENST00000396366 TMEM256Q8N2U0 113 aa12.9□□□□□ -0.34
FXN-203ENST00000396366 OR1L4Q8NGR5 311 aa12.9□□□□□ -0.34
FXN-203ENST00000396366 GPN1Q9HCN4 374 aaPredicted RBP12.9□□□□□ -0.34
FXN-203ENST00000396366 PXMP4Q9Y6I8 212 aa12.9□□□□□ -0.34
FXN-203ENST00000396366 KIAA1109Q2LD37 5005 aa12.89□□□□□ -0.35
FXN-203ENST00000396366 A6NHS1 94 aa12.89□□□□□ -0.35
FXN-203ENST00000396366 J3KRW8 73 aa12.89□□□□□ -0.35
FXN-203ENST00000396366 UPK1BO75841 260 aa12.89□□□□□ -0.35
FXN-203ENST00000396366 CT45A10P0DMU9 189 aa12.89□□□□□ -0.35
FXN-203ENST00000396366 HBG1P69891 147 aa12.89□□□□□ -0.35
FXN-203ENST00000396366 HBG2P69892 147 aa12.89□□□□□ -0.35
FXN-203ENST00000396366 OR10J6PQ8NGY7 276 aa12.89□□□□□ -0.35
FXN-203ENST00000396366 ENKURQ8TC29 256 aa12.89□□□□□ -0.35
FXN-203ENST00000396366 PFDN5Q99471 154 aa12.89□□□□□ -0.35
FXN-203ENST00000396366 NACAE9PAV3 2078 aa12.89□□□□□ -0.35
FXN-203ENST00000396366 RTL8CO15255 209 aa12.88□□□□□ -0.35
FXN-203ENST00000396366 GFI1BQ5VTD9 330 aa12.88□□□□□ -0.35
FXN-203ENST00000396366 CHAC2Q8WUX2 184 aa12.88□□□□□ -0.35
FXN-203ENST00000396366 OR5AC2Q9NZP5 309 aa12.88□□□□□ -0.35
FXN-203ENST00000396366 F5H768 121 aa12.87□□□□□ -0.35
FXN-203ENST00000396366 H0YIZ8 118 aa12.87□□□□□ -0.35
FXN-203ENST00000396366 PYYP10082 97 aa12.87□□□□□ -0.35
FXN-203ENST00000396366 GUK1Q16774 197 aa12.87□□□□□ -0.35
FXN-203ENST00000396366 ATP6V1FQ16864 119 aa12.87□□□□□ -0.35
FXN-203ENST00000396366 LRRC37A5PQ49AS3 106 aa12.87□□□□□ -0.35
FXN-203ENST00000396366 THAP6Q8TBB0 222 aa12.87□□□□□ -0.35
FXN-203ENST00000396366 C16orf74Q96GX8 76 aa12.87□□□□□ -0.35
FXN-203ENST00000396366 NPCDR1Q9BY65 106 aa12.87□□□□□ -0.35
FXN-203ENST00000396366 NOP10Q9NPE3 64 aaKnown RBP12.87□□□□□ -0.35
FXN-203ENST00000396366 TRBV19A0A075B6N1 114 aa12.86□□□□□ -0.35
FXN-203ENST00000396366 M0R3E3 92 aa12.86□□□□□ -0.35
FXN-203ENST00000396366 NDUFB4O95168 129 aa12.86□□□□□ -0.35
FXN-203ENST00000396366 LGALS9BQ3B8N2 356 aa12.86□□□□□ -0.35
FXN-203ENST00000396366 RNF212Q495C1 297 aa12.86□□□□□ -0.35
FXN-203ENST00000396366 LINC00336Q6ZUF6 198 aa12.86□□□□□ -0.35
FXN-203ENST00000396366 OR5C1Q8NGR4 320 aa12.86□□□□□ -0.35
FXN-203ENST00000396366 RNASE8Q8TDE3 154 aaKnown RBP12.86□□□□□ -0.35
FXN-203ENST00000396366 PKHD1P08F94 4074 aa12.85□□□□□ -0.35
FXN-203ENST00000396366 A0A1B0GVY2 172 aa12.85□□□□□ -0.35
FXN-203ENST00000396366 CBY3A6NI87 242 aa12.85□□□□□ -0.35
FXN-203ENST00000396366 NPIPB6E9PJ23 425 aa12.85□□□□□ -0.35
FXN-203ENST00000396366 H7BYZ3 331 aa12.85□□□□□ -0.35
FXN-203ENST00000396366 ERCC8Q13216 396 aa12.85□□□□□ -0.35
FXN-203ENST00000396366 Q6ZR54 194 aa12.85□□□□□ -0.35
FXN-203ENST00000396366 TIMM8BQ9Y5J9 83 aaPredicted RBP12.85□□□□□ -0.35
FXN-203ENST00000396366 TRAV12-3A0A0B4J271 114 aa12.84□□□□□ -0.35
FXN-203ENST00000396366 INMT-MINDY4F8WBC2 141 aa12.84□□□□□ -0.35
FXN-203ENST00000396366 ATP5G1P05496 136 aa12.84□□□□□ -0.35
FXN-203ENST00000396366 ATP5G3P48201 142 aa12.84□□□□□ -0.35
FXN-203ENST00000396366 ZNF493Q6ZR52 646 aa12.84□□□□□ -0.35
FXN-203ENST00000396366 EXOC3-AS1Q8N2X6 119 aa12.84□□□□□ -0.35
FXN-203ENST00000396366 TMEM263Q8WUH6 116 aaKnown RBP12.84□□□□□ -0.35
FXN-203ENST00000396366 BLNKQ8WV28 456 aa12.84□□□□□ -0.35
FXN-203ENST00000396366 SLC25A2Q9BXI2 301 aa12.84□□□□□ -0.35
FXN-203ENST00000396366 NMES1Q9C002 83 aa12.84□□□□□ -0.35
FXN-203ENST00000396366 TMEM14CQ9P0S9 112 aa12.84□□□□□ -0.35
FXN-203ENST00000396366 PRSS29PA6NIE9 313 aa12.83□□□□□ -0.36
FXN-203ENST00000396366 E5RGE8 158 aa12.83□□□□□ -0.36
FXN-203ENST00000396366 ZNF253O75346 499 aa12.83□□□□□ -0.36
FXN-203ENST00000396366 NUDT3O95989 172 aa12.83□□□□□ -0.36
FXN-203ENST00000396366 RLN2P04090 185 aa12.83□□□□□ -0.36
FXN-203ENST00000396366 HIST1H1EP10412 219 aaKnown RBP12.83□□□□□ -0.36
FXN-203ENST00000396366 CLINT1Q14677 625 aa12.83□□□□□ -0.36
FXN-203ENST00000396366 MIR17HGQ75NE6 70 aa12.83□□□□□ -0.36
FXN-203ENST00000396366 C15orf53Q8NAA6 179 aa12.83□□□□□ -0.36
FXN-203ENST00000396366 C20orf144Q9BQM9 153 aa12.83□□□□□ -0.36
FXN-203ENST00000396366 TIMM9Q9Y5J7 89 aa12.83□□□□□ -0.36
FXN-203ENST00000396366 DYNC1H1Q14204 4646 aaKnown RBP12.82□□□□□ -0.36
FXN-203ENST00000396366 MPDU1O75352 247 aa12.82□□□□□ -0.36
FXN-203ENST00000396366 LEPP41159 167 aa12.82□□□□□ -0.36
FXN-203ENST00000396366 H2BFSP57053 126 aa12.82□□□□□ -0.36
FXN-203ENST00000396366 FAM167A-AS1Q96KT0 104 aa12.82□□□□□ -0.36
FXN-203ENST00000396366 SLC25A31Q9H0C2 315 aa12.82□□□□□ -0.36
FXN-203ENST00000396366 PTTG2Q9NZH5 202 aa12.82□□□□□ -0.36
FXN-203ENST00000396366 ODF3Q96PU9 254 aa12.81□□□□□ -0.36
FXN-203ENST00000396366 AGPAT4-IT1Q9H0P7 198 aa12.81□□□□□ -0.36
FXN-203ENST00000396366 PRAF2O60831 178 aa12.8□□□□□ -0.36
FXN-203ENST00000396366 CCDC28AQ8IWP9 274 aa12.8□□□□□ -0.36
FXN-203ENST00000396366 RNF141Q8WVD5 230 aa12.8□□□□□ -0.36
FXN-203ENST00000396366 MRPL53Q96EL3 112 aaKnown RBP12.8□□□□□ -0.36
FXN-203ENST00000396366 ATG101Q9BSB4 218 aa12.8□□□□□ -0.36
FXN-203ENST00000396366 MARVELD1Q9BSK0 173 aa12.8□□□□□ -0.36
FXN-203ENST00000396366 WDR61Q9GZS3 305 aaKnown RBP12.8□□□□□ -0.36
FXN-203ENST00000396366 DNAH11Q96DT5 4516 aa12.8□□□□□ -0.36
FXN-203ENST00000396366 GAGE12BA1L429 117 aa12.79□□□□□ -0.36
FXN-203ENST00000396366 GAGE7O76087 117 aa12.79□□□□□ -0.36
FXN-203ENST00000396366 GAGE12FP0CL80 117 aa12.79□□□□□ -0.36
FXN-203ENST00000396366 GAGE12GP0CL81 117 aa12.79□□□□□ -0.36
FXN-203ENST00000396366 GAGE12IP0CL82 117 aa12.79□□□□□ -0.36
FXN-203ENST00000396366 CD300CQ08708 224 aa12.79□□□□□ -0.36
FXN-203ENST00000396366 OR5I1Q13606 314 aa12.79□□□□□ -0.36
FXN-203ENST00000396366 ICAM4Q14773 271 aa12.79□□□□□ -0.36
FXN-203ENST00000396366 FAM122CQ6P4D5 195 aa12.79□□□□□ -0.36
FXN-203ENST00000396366 LINC00612Q8N6U2 182 aa12.79□□□□□ -0.36
FXN-203ENST00000396366 PPP1R1CQ8WVI7 109 aa12.79□□□□□ -0.36
FXN-203ENST00000396366 FAM19A4Q96LR4 140 aa12.79□□□□□ -0.36
FXN-203ENST00000396366 IGKV2-40A0A087WW87 121 aaPredicted RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms