RNA–Protein interactions for RNA: ENST00000395853.5

MSH5-205, Transcript of mutS homolog 5, humanhuman

TSL 2 BASIC

Gene MSH5, Length 2,704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-205ENST00000395853 TEX36Q5VZQ5 186 aa7.11□□□□□ -1.27
MSH5-205ENST00000395853 MORN3Q6PF18 240 aaPredicted RBP7.11□□□□□ -1.27
MSH5-205ENST00000395853 CRIP3Q6Q6R5 217 aa7.11□□□□□ -1.27
MSH5-205ENST00000395853 IGFBPL1Q8WX77 278 aa7.11□□□□□ -1.27
MSH5-205ENST00000395853 CCL28Q9NRJ3 127 aa7.11□□□□□ -1.27
MSH5-205ENST00000395853 CNTFRP26992 372 aa7.1□□□□□ -1.27
MSH5-205ENST00000395853 TMEM86BQ8N661 226 aa7.1□□□□□ -1.27
MSH5-205ENST00000395853 Q8N7P7 452 aa7.1□□□□□ -1.27
MSH5-205ENST00000395853 ZNF414Q96IQ9 312 aa7.1□□□□□ -1.27
MSH5-205ENST00000395853 MYO7BQ6PIF6 2116 aa7.1□□□□□ -1.27
MSH5-205ENST00000395853 BOD1L1Q8NFC6 3051 aa7.1□□□□□ -1.27
MSH5-205ENST00000395853 CACNA1DQ01668 2161 aa7.1□□□□□ -1.27
MSH5-205ENST00000395853 TRAV2A0A0B4J234 112 aa7.1□□□□□ -1.27
MSH5-205ENST00000395853 LOC107984156A0A0G2JMH3 177 aa7.1□□□□□ -1.27
MSH5-205ENST00000395853 K7EM74 188 aa7.1□□□□□ -1.27
MSH5-205ENST00000395853 RFPL3SP0C7P2 107 aa7.1□□□□□ -1.27
MSH5-205ENST00000395853 RSPO1Q2MKA7 263 aaPredicted RBP7.1□□□□□ -1.27
MSH5-205ENST00000395853 ARL17AQ8IVW1 177 aa7.1□□□□□ -1.27
MSH5-205ENST00000395853 RND1Q92730 232 aa7.1□□□□□ -1.27
MSH5-205ENST00000395853 SNRNP40Q96DI7 357 aaKnown RBP7.1□□□□□ -1.27
MSH5-205ENST00000395853 SRXN1Q9BYN0 137 aa7.1□□□□□ -1.27
MSH5-205ENST00000395853 MED13Q9UHV7 2174 aa7.1□□□□□ -1.27
MSH5-205ENST00000395853 ESPL1Q14674 2120 aa7.09□□□□□ -1.27
MSH5-205ENST00000395853 IGKV1D-13A0A0B4J2D9 117 aa7.09□□□□□ -1.27
MSH5-205ENST00000395853 PMS2P5A8MQ11 134 aa7.09□□□□□ -1.27
MSH5-205ENST00000395853 HOXA3O43365 443 aaPredicted RBP7.09□□□□□ -1.27
MSH5-205ENST00000395853 APOHP02749 345 aaPredicted RBP7.09□□□□□ -1.27
MSH5-205ENST00000395853 IGKV1-13P0DP09 117 aa7.09□□□□□ -1.27
MSH5-205ENST00000395853 FKBP2P26885 142 aaKnown RBP7.09□□□□□ -1.27
MSH5-205ENST00000395853 B3GALT5-AS1P59052 145 aa7.09□□□□□ -1.27
MSH5-205ENST00000395853 HSPE1P61604 102 aaKnown RBP7.09□□□□□ -1.27
MSH5-205ENST00000395853 ZNF493Q6ZR52 646 aa7.09□□□□□ -1.27
MSH5-205ENST00000395853 FAM231DQ6ZW35 169 aa7.09□□□□□ -1.27
MSH5-205ENST00000395853 ABHD12Q8N2K0 398 aa7.09□□□□□ -1.27
MSH5-205ENST00000395853 C5orf63A6NC05 138 aa7.09□□□□□ -1.27
MSH5-205ENST00000395853 PMVKQ15126 192 aa7.09□□□□□ -1.27
MSH5-205ENST00000395853 ATP1A1-AS1Q5TC04 95 aa7.09□□□□□ -1.27
MSH5-205ENST00000395853 RPRMLQ8N4K4 120 aa7.09□□□□□ -1.27
MSH5-205ENST00000395853 NPIPB3Q92617 1050 aa7.09□□□□□ -1.27
MSH5-205ENST00000395853 DPH3Q96FX2 82 aa7.09□□□□□ -1.27
MSH5-205ENST00000395853 HIST1H4GQ99525 98 aa7.09□□□□□ -1.27
MSH5-205ENST00000395853 SPANXDQ9BXN6 97 aa7.09□□□□□ -1.27
MSH5-205ENST00000395853 TTTY13Q9BZ97 58 aa7.09□□□□□ -1.27
MSH5-205ENST00000395853 HEYLQ9NQ87 328 aaPredicted RBP7.09□□□□□ -1.27
MSH5-205ENST00000395853 IGKV2D-26A0A0A0MRZ7 120 aa7.08□□□□□ -1.28
MSH5-205ENST00000395853 C5orf49A4QMS7 147 aa7.08□□□□□ -1.28
MSH5-205ENST00000395853 PINLYPA6NC86 204 aa7.08□□□□□ -1.28
MSH5-205ENST00000395853 NBR2O15453 112 aa7.08□□□□□ -1.28
MSH5-205ENST00000395853 RFESDQ8TAC1 157 aa7.08□□□□□ -1.28
MSH5-205ENST00000395853 ZNF837Q96EG3 531 aaPredicted RBP7.08□□□□□ -1.28
MSH5-205ENST00000395853 IGF2BP2-AS1Q96M15 143 aa7.08□□□□□ -1.28
MSH5-205ENST00000395853 WDR83OSQ9Y284 106 aa7.08□□□□□ -1.28
MSH5-205ENST00000395853 TRAV8-4A0A0B4J246 113 aa7.08□□□□□ -1.28
MSH5-205ENST00000395853 TRBV7-7A0A0K0K1E9 115 aa7.08□□□□□ -1.28
MSH5-205ENST00000395853 IGKV1-5P01602 117 aa7.08□□□□□ -1.28
MSH5-205ENST00000395853 CCL1P22362 96 aa7.08□□□□□ -1.28
MSH5-205ENST00000395853 FCER1GP30273 86 aa7.08□□□□□ -1.28
MSH5-205ENST00000395853 NBPF19A0A087WUL8 3843 aa7.08□□□□□ -1.28
MSH5-205ENST00000395853 MYMXA0A1B0GTQ4 84 aa7.07□□□□□ -1.28
MSH5-205ENST00000395853 OVOL1O14753 267 aa7.07□□□□□ -1.28
MSH5-205ENST00000395853 MPDU1O75352 247 aa7.07□□□□□ -1.28
MSH5-205ENST00000395853 SRSF9Q13242 221 aaKnown RBP eCLIP7.07□□□□□ -1.28
MSH5-205ENST00000395853 KLF17Q5JT82 389 aaPredicted RBP7.07□□□□□ -1.28
MSH5-205ENST00000395853 SPINK14Q6IE38 97 aa7.07□□□□□ -1.28
MSH5-205ENST00000395853 ZFP2Q6ZN57 461 aa7.07□□□□□ -1.28
MSH5-205ENST00000395853 COL12A1Q99715 3063 aa7.07□□□□□ -1.28
MSH5-205ENST00000395853 IGKV1-39P01597 117 aa7.07□□□□□ -1.28
MSH5-205ENST00000395853 IGKV1D-39P04432 117 aa7.07□□□□□ -1.28
MSH5-205ENST00000395853 UBE2D3P61077 147 aa7.07□□□□□ -1.28
MSH5-205ENST00000395853 UBE2D2P62837 147 aa7.07□□□□□ -1.28
MSH5-205ENST00000395853 LINC00336Q6ZUF6 198 aa7.07□□□□□ -1.28
MSH5-205ENST00000395853 GGNQ86UU5 652 aa7.07□□□□□ -1.28
MSH5-205ENST00000395853 PRSS3P2Q8NHM4 247 aa7.07□□□□□ -1.28
MSH5-205ENST00000395853 NABP1Q96AH0 204 aa7.07□□□□□ -1.28
MSH5-205ENST00000395853 CRYGAP11844 174 aa7.07□□□□□ -1.28
MSH5-205ENST00000395853 C6orf226Q5I0X4 101 aa7.07□□□□□ -1.28
MSH5-205ENST00000395853 C10orf128Q5T292 105 aa7.07□□□□□ -1.28
MSH5-205ENST00000395853 Q6ZPA2 131 aa7.07□□□□□ -1.28
MSH5-205ENST00000395853 COQ2Q96H96 371 aa7.07□□□□□ -1.28
MSH5-205ENST00000395853 TRGV11A0A075B6L2 103 aa7.06□□□□□ -1.28
MSH5-205ENST00000395853 A0A0U1RRA0 63 aa7.06□□□□□ -1.28
MSH5-205ENST00000395853 CXCL13O43927 109 aa7.06□□□□□ -1.28
MSH5-205ENST00000395853 HLA-DRB4P13762 266 aa7.06□□□□□ -1.28
MSH5-205ENST00000395853 TMEM258P61165 79 aa7.06□□□□□ -1.28
MSH5-205ENST00000395853 C8orf31Q8N9H6 132 aa7.06□□□□□ -1.28
MSH5-205ENST00000395853 HES7Q9BYE0 225 aa7.06□□□□□ -1.28
MSH5-205ENST00000395853 SLC25A39Q9BZJ4 359 aaPredicted RBP7.06□□□□□ -1.28
MSH5-205ENST00000395853 ZNF442Q9H7R0 627 aa7.06□□□□□ -1.28
MSH5-205ENST00000395853 HLA-DRB4X5D2U9 266 aa7.06□□□□□ -1.28
MSH5-205ENST00000395853 FREM1Q5H8C1 2179 aa7.06□□□□□ -1.28
MSH5-205ENST00000395853 ZNF407Q9C0G0 2248 aa7.06□□□□□ -1.28
MSH5-205ENST00000395853 SHISA9B4DS77 424 aa7.06□□□□□ -1.28
MSH5-205ENST00000395853 KRTAP21-3Q3LHN1 58 aa7.06□□□□□ -1.28
MSH5-205ENST00000395853 C1orf195Q5TG92 126 aa7.06□□□□□ -1.28
MSH5-205ENST00000395853 ASPHD1Q5U4P2 390 aa7.06□□□□□ -1.28
MSH5-205ENST00000395853 PDPNQ86YL7 162 aa7.06□□□□□ -1.28
MSH5-205ENST00000395853 EXOC3-AS1Q8N2X6 119 aa7.06□□□□□ -1.28
MSH5-205ENST00000395853 LYZL4Q96KX0 146 aa7.06□□□□□ -1.28
MSH5-205ENST00000395853 FOXA2Q9Y261 457 aaPredicted RBP7.06□□□□□ -1.28
MSH5-205ENST00000395853 PYGO1Q9Y3Y4 419 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms