RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 ABHD17AQ96GS6 310 aa7.88□□□□□ -1.15
UBE2D3-208ENST00000394803 SH3BGRL2Q9UJC5 107 aa7.88□□□□□ -1.15
UBE2D3-208ENST00000394803 CNOT1A5YKK6 2376 aaKnown RBP7.88□□□□□ -1.15
UBE2D3-208ENST00000394803 MALRD1Q5VYJ5 2156 aa7.87□□□□□ -1.15
UBE2D3-208ENST00000394803 LOC389332A0A1B0GUA5 103 aa7.87□□□□□ -1.15
UBE2D3-208ENST00000394803 GAGE12BA1L429 117 aa7.87□□□□□ -1.15
UBE2D3-208ENST00000394803 RBAKDNA6NC62 111 aa7.87□□□□□ -1.15
UBE2D3-208ENST00000394803 M0R3E3 92 aa7.87□□□□□ -1.15
UBE2D3-208ENST00000394803 CACNG7P62955 275 aa7.87□□□□□ -1.15
UBE2D3-208ENST00000394803 HES1Q14469 280 aa7.87□□□□□ -1.15
UBE2D3-208ENST00000394803 C21orf62-AS1Q17RA5 79 aa7.87□□□□□ -1.15
UBE2D3-208ENST00000394803 RNF151Q2KHN1 245 aa7.87□□□□□ -1.15
UBE2D3-208ENST00000394803 PRR31Q5SQ13 230 aa7.87□□□□□ -1.15
UBE2D3-208ENST00000394803 C1orf122Q6ZSJ8 110 aa7.87□□□□□ -1.15
UBE2D3-208ENST00000394803 AMN1Q8IY45 258 aa7.87□□□□□ -1.15
UBE2D3-208ENST00000394803 OR5A1Q8NGJ0 315 aa7.87□□□□□ -1.15
UBE2D3-208ENST00000394803 CNFNQ9BYD5 112 aa7.87□□□□□ -1.15
UBE2D3-208ENST00000394803 ZFHX4Q86UP3 3567 aa7.87□□□□□ -1.15
UBE2D3-208ENST00000394803 LINC01546A6NGU7 62 aa7.87□□□□□ -1.15
UBE2D3-208ENST00000394803 FABP5P3A8MUU1 101 aa7.87□□□□□ -1.15
UBE2D3-208ENST00000394803 IGLC6P0CF74 106 aa7.87□□□□□ -1.15
UBE2D3-208ENST00000394803 FGF6P10767 208 aa7.87□□□□□ -1.15
UBE2D3-208ENST00000394803 ZNF672Q499Z4 452 aaPredicted RBP7.87□□□□□ -1.15
UBE2D3-208ENST00000394803 MINOS1Q5TGZ0 78 aa7.87□□□□□ -1.15
UBE2D3-208ENST00000394803 SLC50A1Q9BRV3 221 aa7.87□□□□□ -1.15
UBE2D3-208ENST00000394803 MINOS1-NBL1R4GNA1 71 aa7.87□□□□□ -1.15
UBE2D3-208ENST00000394803 SPTBN2O15020 2390 aa7.86□□□□□ -1.15
UBE2D3-208ENST00000394803 LAMA5O15230 3695 aa7.86□□□□□ -1.15
UBE2D3-208ENST00000394803 A0A096LNJ9 63 aa7.86□□□□□ -1.15
UBE2D3-208ENST00000394803 TMEM213A2RRL7 107 aa7.86□□□□□ -1.15
UBE2D3-208ENST00000394803 ODF3BA8MYP8 253 aa7.86□□□□□ -1.15
UBE2D3-208ENST00000394803 NCR2O95944 276 aa7.86□□□□□ -1.15
UBE2D3-208ENST00000394803 PRTN3P24158 256 aa7.86□□□□□ -1.15
UBE2D3-208ENST00000394803 FANCD2OSQ96PS1 177 aa7.86□□□□□ -1.15
UBE2D3-208ENST00000394803 ASCL2Q99929 193 aa7.86□□□□□ -1.15
UBE2D3-208ENST00000394803 ATP5LO75964 103 aa7.86□□□□□ -1.15
UBE2D3-208ENST00000394803 HLA-DRB4P13762 266 aa7.86□□□□□ -1.15
UBE2D3-208ENST00000394803 FBXL19-AS1Q494R0 122 aa7.86□□□□□ -1.15
UBE2D3-208ENST00000394803 MCRIP2Q9BUT9 160 aaKnown RBP7.86□□□□□ -1.15
UBE2D3-208ENST00000394803 HIGD1BQ9P298 99 aa7.86□□□□□ -1.15
UBE2D3-208ENST00000394803 HLA-DRB4X5D2U9 266 aa7.86□□□□□ -1.15
UBE2D3-208ENST00000394803 IGKV2-40A0A087WW87 121 aaPredicted RBP7.85□□□□□ -1.15
UBE2D3-208ENST00000394803 TMSB15BA0A087X1C1 80 aa7.85□□□□□ -1.15
UBE2D3-208ENST00000394803 IGKV2D-40P01614 121 aaPredicted RBP7.85□□□□□ -1.15
UBE2D3-208ENST00000394803 FCER1GP30273 86 aa7.85□□□□□ -1.15
UBE2D3-208ENST00000394803 Q8NA96 180 aa7.85□□□□□ -1.15
UBE2D3-208ENST00000394803 HILPDAQ9Y5L2 63 aa7.85□□□□□ -1.15
UBE2D3-208ENST00000394803 AKAP13Q12802 2813 aa7.85□□□□□ -1.15
UBE2D3-208ENST00000394803 TRAV8-6A0A0B4J262 113 aa7.84□□□□□ -1.15
UBE2D3-208ENST00000394803 K7EP34 96 aa7.84□□□□□ -1.15
UBE2D3-208ENST00000394803 EGR2P11161 476 aaPredicted RBP7.84□□□□□ -1.15
UBE2D3-208ENST00000394803 PAX8Q06710 450 aa7.84□□□□□ -1.15
UBE2D3-208ENST00000394803 HIF1ANQ9NWT6 349 aa7.84□□□□□ -1.15
UBE2D3-208ENST00000394803 CFAP47Q6ZTR5 3102 aa7.84□□□□□ -1.15
UBE2D3-208ENST00000394803 PLXNB1O43157 2135 aa7.84□□□□□ -1.15
UBE2D3-208ENST00000394803 NDUFS7O75251 213 aa7.84□□□□□ -1.15
UBE2D3-208ENST00000394803 NPYP01303 97 aa7.84□□□□□ -1.15
UBE2D3-208ENST00000394803 ORM1P02763 201 aa7.84□□□□□ -1.15
UBE2D3-208ENST00000394803 EBI3Q14213 229 aa7.84□□□□□ -1.15
UBE2D3-208ENST00000394803 MRPL53Q96EL3 112 aaKnown RBP7.84□□□□□ -1.15
UBE2D3-208ENST00000394803 TP73-AS1Q9UF72 201 aa7.84□□□□□ -1.15
UBE2D3-208ENST00000394803 A0A0G2JLM5 398 aa7.83□□□□□ -1.16
UBE2D3-208ENST00000394803 NCBP2LA6PVI3 153 aaKnown RBP7.83□□□□□ -1.16
UBE2D3-208ENST00000394803 LYNX1G3V0Z9 82 aa7.83□□□□□ -1.16
UBE2D3-208ENST00000394803 GOSR1O95249 250 aa7.83□□□□□ -1.16
UBE2D3-208ENST00000394803 LYNX1P0DP58 116 aa7.83□□□□□ -1.16
UBE2D3-208ENST00000394803 DLX1P56177 255 aa7.83□□□□□ -1.16
UBE2D3-208ENST00000394803 KIR3DS1Q14943 382 aa7.83□□□□□ -1.16
UBE2D3-208ENST00000394803 ZGRF1Q86YA3 2104 aa7.83□□□□□ -1.16
UBE2D3-208ENST00000394803 ARFGEF3Q5TH69 2177 aa7.83□□□□□ -1.16
UBE2D3-208ENST00000394803 FAM106CPP0CH98 169 aa7.83□□□□□ -1.16
UBE2D3-208ENST00000394803 NMUP48645 174 aa7.83□□□□□ -1.16
UBE2D3-208ENST00000394803 LOXL1Q08397 574 aaPredicted RBP7.83□□□□□ -1.16
UBE2D3-208ENST00000394803 FAM106AQ4KMX7 169 aa7.83□□□□□ -1.16
UBE2D3-208ENST00000394803 UFSP1Q6NVU6 142 aa7.83□□□□□ -1.16
UBE2D3-208ENST00000394803 ADAMTSL5Q6ZMM2 481 aa7.83□□□□□ -1.16
UBE2D3-208ENST00000394803 OR2K2Q8NGT1 345 aa7.83□□□□□ -1.16
UBE2D3-208ENST00000394803 F8W735 103 aaPredicted RBP7.82□□□□□ -1.16
UBE2D3-208ENST00000394803 IGKCP01834 107 aa7.82□□□□□ -1.16
UBE2D3-208ENST00000394803 SMIM13P0DJ93 91 aa7.82□□□□□ -1.16
UBE2D3-208ENST00000394803 FABP2P12104 132 aa7.82□□□□□ -1.16
UBE2D3-208ENST00000394803 TMEM11P17152 192 aa7.82□□□□□ -1.16
UBE2D3-208ENST00000394803 KLF17Q5JT82 389 aaPredicted RBP7.82□□□□□ -1.16
UBE2D3-208ENST00000394803 Q71RC1 249 aaPredicted RBP7.82□□□□□ -1.16
UBE2D3-208ENST00000394803 Q8N6K4 173 aa7.82□□□□□ -1.16
UBE2D3-208ENST00000394803 Q8N8P6 123 aa7.82□□□□□ -1.16
UBE2D3-208ENST00000394803 FAM110DQ8TAY7 271 aaPredicted RBP7.82□□□□□ -1.16
UBE2D3-208ENST00000394803 SNAI2O43623 268 aa7.82□□□□□ -1.16
UBE2D3-208ENST00000394803 TNFRSF6BO95407 300 aa7.82□□□□□ -1.16
UBE2D3-208ENST00000394803 PRSS1P07477 247 aa7.82□□□□□ -1.16
UBE2D3-208ENST00000394803 CTSGP08311 255 aa7.82□□□□□ -1.16
UBE2D3-208ENST00000394803 EVI2AP22794 236 aa7.82□□□□□ -1.16
UBE2D3-208ENST00000394803 LEPP41159 167 aa7.82□□□□□ -1.16
UBE2D3-208ENST00000394803 UQCRFS1P47985 274 aa7.82□□□□□ -1.16
UBE2D3-208ENST00000394803 PRB3Q04118 309 aaPredicted RBP7.82□□□□□ -1.16
UBE2D3-208ENST00000394803 KLK9Q2XQG4 91 aa7.82□□□□□ -1.16
UBE2D3-208ENST00000394803 ERASQ7Z444 233 aa7.82□□□□□ -1.16
UBE2D3-208ENST00000394803 ZMAT4Q9H898 229 aa7.82□□□□□ -1.16
UBE2D3-208ENST00000394803 KLK9Q9UKQ9 250 aa7.82□□□□□ -1.16
UBE2D3-208ENST00000394803 SPTBN4Q9H254 2564 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms