RNA–Protein interactions for RNA: ENST00000393357.6

PHTF1-205, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHTF1, Length 3,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-205ENST00000393357 NDUFA3O95167 84 aa12.96□□□□□ -0.34
PHTF1-205ENST00000393357 LHBP01229 141 aa12.96□□□□□ -0.34
PHTF1-205ENST00000393357 IGLV2-11P01706 119 aa12.96□□□□□ -0.34
PHTF1-205ENST00000393357 HBDP02042 147 aa12.96□□□□□ -0.34
PHTF1-205ENST00000393357 TMEM167AQ8TBQ9 72 aa12.96□□□□□ -0.34
PHTF1-205ENST00000393357 TRAV26-2A0A0B4J265 109 aa12.95□□□□□ -0.34
PHTF1-205ENST00000393357 NDUFS7O75251 213 aa12.95□□□□□ -0.34
PHTF1-205ENST00000393357 ZC2HC1BQ5TFG8 222 aa12.95□□□□□ -0.34
PHTF1-205ENST00000393357 RAI1Q7Z5J4 1906 aaPredicted RBP12.95□□□□□ -0.34
PHTF1-205ENST00000393357 GLRXP35754 106 aa12.95□□□□□ -0.34
PHTF1-205ENST00000393357 C1orf210Q8IVY1 113 aa12.95□□□□□ -0.34
PHTF1-205ENST00000393357 UFC1Q9Y3C8 167 aa12.95□□□□□ -0.34
PHTF1-205ENST00000393357 PRR33A8MZF0 331 aa12.94□□□□□ -0.34
PHTF1-205ENST00000393357 CIDEAO60543 219 aa12.94□□□□□ -0.34
PHTF1-205ENST00000393357 FCN3O75636 299 aa12.94□□□□□ -0.34
PHTF1-205ENST00000393357 ATRXP46100 2492 aa12.94□□□□□ -0.34
PHTF1-205ENST00000393357 NDUFB3O43676 98 aa12.94□□□□□ -0.34
PHTF1-205ENST00000393357 RBPJQ06330 500 aa12.94□□□□□ -0.34
PHTF1-205ENST00000393357 BOD1L2Q8IYS8 172 aa12.94□□□□□ -0.34
PHTF1-205ENST00000393357 TRAV40A0A0B4J280 105 aa12.94□□□□□ -0.34
PHTF1-205ENST00000393357 NPIPB6E9PJ23 425 aa12.94□□□□□ -0.34
PHTF1-205ENST00000393357 K7EQM0 130 aa12.94□□□□□ -0.34
PHTF1-205ENST00000393357 ZNF833PQ6ZTB9 187 aa12.94□□□□□ -0.34
PHTF1-205ENST00000393357 NGBQ9NPG2 151 aa12.94□□□□□ -0.34
PHTF1-205ENST00000393357 IGLV1-44P01699 117 aa12.93□□□□□ -0.34
PHTF1-205ENST00000393357 CHAC1Q9BUX1 264 aa12.93□□□□□ -0.34
PHTF1-205ENST00000393357 OTORQ9NRC9 128 aa12.93□□□□□ -0.34
PHTF1-205ENST00000393357 DKK4Q9UBT3 224 aa12.93□□□□□ -0.34
PHTF1-205ENST00000393357 SH2D1AO60880 128 aa12.93□□□□□ -0.34
PHTF1-205ENST00000393357 IGLV2-23P01705 113 aa12.93□□□□□ -0.34
PHTF1-205ENST00000393357 CR1LQ2VPA4 569 aa12.93□□□□□ -0.34
PHTF1-205ENST00000393357 SIGMAR1Q99720 223 aa12.93□□□□□ -0.34
PHTF1-205ENST00000393357 LINC00312Q9Y6C7 94 aa12.93□□□□□ -0.34
PHTF1-205ENST00000393357 AKAP13Q12802 2813 aa12.93□□□□□ -0.34
PHTF1-205ENST00000393357 PRSS33Q8NF86 280 aa12.92□□□□□ -0.34
PHTF1-205ENST00000393357 ABHD17AQ96GS6 310 aa12.92□□□□□ -0.34
PHTF1-205ENST00000393357 SPRY4Q9C004 299 aa12.92□□□□□ -0.34
PHTF1-205ENST00000393357 SEM1Q6ZVN7 128 aa12.92□□□□□ -0.34
PHTF1-205ENST00000393357 SOX21Q9Y651 276 aaPredicted RBP12.92□□□□□ -0.34
PHTF1-205ENST00000393357 ERCC8Q13216 396 aa12.91□□□□□ -0.34
PHTF1-205ENST00000393357 HIST1H4GQ99525 98 aa12.91□□□□□ -0.34
PHTF1-205ENST00000393357 SRSF8Q9BRL6 282 aaKnown RBP12.91□□□□□ -0.34
PHTF1-205ENST00000393357 ZNF492Q9P255 531 aa12.91□□□□□ -0.34
PHTF1-205ENST00000393357 APOBEC3AP31941 199 aaPredicted RBP12.91□□□□□ -0.34
PHTF1-205ENST00000393357 FAM104BQ5XKR9 115 aa12.91□□□□□ -0.34
PHTF1-205ENST00000393357 THAP8Q8NA92 274 aa12.91□□□□□ -0.34
PHTF1-205ENST00000393357 SPG11Q96JI7 2443 aa12.91□□□□□ -0.34
PHTF1-205ENST00000393357 LY6HO94772 140 aa12.9□□□□□ -0.34
PHTF1-205ENST00000393357 CEACAM3P40198 252 aa12.9□□□□□ -0.34
PHTF1-205ENST00000393357 ZNF418Q8TF45 676 aaPredicted RBP12.9□□□□□ -0.34
PHTF1-205ENST00000393357 AAMDCQ9H7C9 122 aa12.9□□□□□ -0.34
PHTF1-205ENST00000393357 GAGE12HA6NDE8 117 aa12.9□□□□□ -0.34
PHTF1-205ENST00000393357 EGR2P11161 476 aaPredicted RBP12.9□□□□□ -0.34
PHTF1-205ENST00000393357 EFNA4P52798 201 aa12.9□□□□□ -0.34
PHTF1-205ENST00000393357 SCGB2A2Q13296 93 aa12.9□□□□□ -0.34
PHTF1-205ENST00000393357 C3orf36Q3SXR2 165 aa12.9□□□□□ -0.34
PHTF1-205ENST00000393357 DYNLRB1Q9NP97 96 aa12.9□□□□□ -0.34
PHTF1-205ENST00000393357 PLSCR4Q9NRQ2 329 aa12.9□□□□□ -0.34
PHTF1-205ENST00000393357 A0A1B0GWB2 263 aa12.9□□□□□ -0.34
PHTF1-205ENST00000393357 TMEM158Q8WZ71 300 aa12.9□□□□□ -0.34
PHTF1-205ENST00000393357 VGLL1Q99990 258 aa12.9□□□□□ -0.34
PHTF1-205ENST00000393357 ANKHD1Q8IWZ3 2542 aaKnown RBP12.9□□□□□ -0.34
PHTF1-205ENST00000393357 TRBV19A0A075B6N1 114 aa12.89□□□□□ -0.35
PHTF1-205ENST00000393357 TMEM8BA6NDV4 472 aa12.89□□□□□ -0.35
PHTF1-205ENST00000393357 IGKV1-17P01599 117 aa12.89□□□□□ -0.35
PHTF1-205ENST00000393357 ZNF80P51504 273 aaPredicted RBP12.89□□□□□ -0.35
PHTF1-205ENST00000393357 NEGR1Q7Z3B1 354 aa12.89□□□□□ -0.35
PHTF1-205ENST00000393357 PPP1R27Q86WC6 154 aa12.89□□□□□ -0.35
PHTF1-205ENST00000393357 ZNF479Q96JC4 524 aa12.89□□□□□ -0.35
PHTF1-205ENST00000393357 SCNM1Q9BWG6 230 aa12.89□□□□□ -0.35
PHTF1-205ENST00000393357 COL25A1Q9BXS0 654 aaPredicted RBP12.89□□□□□ -0.35
PHTF1-205ENST00000393357 GFRA4Q9GZZ7 299 aa12.89□□□□□ -0.35
PHTF1-205ENST00000393357 CTSZQ9UBR2 303 aa12.89□□□□□ -0.35
PHTF1-205ENST00000393357 LOC107984156A0A0G2JMH3 177 aa12.89□□□□□ -0.35
PHTF1-205ENST00000393357 CT83Q5H943 113 aa12.89□□□□□ -0.35
PHTF1-205ENST00000393357 ARL17AQ8IVW1 177 aa12.89□□□□□ -0.35
PHTF1-205ENST00000393357 TRGV9Q99603 122 aa12.89□□□□□ -0.35
PHTF1-205ENST00000393357 CELSR1Q9NYQ6 3014 aa12.89□□□□□ -0.35
PHTF1-205ENST00000393357 SORL1Q92673 2214 aa12.89□□□□□ -0.35
PHTF1-205ENST00000393357 TRBV25-1A0A075B6N4 114 aa12.88□□□□□ -0.35
PHTF1-205ENST00000393357 EMP1P54849 157 aa12.88□□□□□ -0.35
PHTF1-205ENST00000393357 CYSLTR1Q9Y271 337 aa12.88□□□□□ -0.35
PHTF1-205ENST00000393357 CD40P25942 277 aa12.88□□□□□ -0.35
PHTF1-205ENST00000393357 RAB9AP51151 201 aa12.88□□□□□ -0.35
PHTF1-205ENST00000393357 MAPKAPK5-AS1Q8N8E1 139 aa12.88□□□□□ -0.35
PHTF1-205ENST00000393357 RPEQ96AT9 228 aa12.88□□□□□ -0.35
PHTF1-205ENST00000393357 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.88□□□□□ -0.353e-6■■■■■ 32
PHTF1-205ENST00000393357 RPS20P60866 119 aaKnown RBP12.88□□□□□ -0.35
PHTF1-205ENST00000393357 Q6ZQT7 251 aa12.88□□□□□ -0.35
PHTF1-205ENST00000393357 RNF182Q8N6D2 247 aa12.88□□□□□ -0.35
PHTF1-205ENST00000393357 SIGLEC9Q9Y336 463 aa12.88□□□□□ -0.35
PHTF1-205ENST00000393357 OR4X2Q8NGF9 303 aa12.87□□□□□ -0.35
PHTF1-205ENST00000393357 RNF125Q96EQ8 232 aa12.87□□□□□ -0.35
PHTF1-205ENST00000393357 NCBP2LA6PVI3 153 aaKnown RBP12.87□□□□□ -0.35
PHTF1-205ENST00000393357 LGALS9BQ3B8N2 356 aa12.87□□□□□ -0.35
PHTF1-205ENST00000393357 LGALS9CQ6DKI2 356 aa12.87□□□□□ -0.35
PHTF1-205ENST00000393357 SIGLEC15Q6ZMC9 328 aa12.87□□□□□ -0.35
PHTF1-205ENST00000393357 UBALD2Q8IYN6 164 aa12.87□□□□□ -0.35
PHTF1-205ENST00000393357 OR5A1Q8NGJ0 315 aa12.87□□□□□ -0.35
PHTF1-205ENST00000393357 OR9G4Q8NGQ1 327 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 130.8 ms