RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 BAGE3Q86Y29 109 aa8.14□□□□□ -1.11
POLR2J3-201ENST00000379340 SPATA3Q8NHX4 192 aa8.14□□□□□ -1.11
POLR2J3-201ENST00000379340 SGK494Q96LW2 274 aa8.14□□□□□ -1.11
POLR2J3-201ENST00000379340 C17orf77Q96MU5 243 aa8.14□□□□□ -1.11
POLR2J3-201ENST00000379340 ZFAND3Q9H8U3 227 aa8.14□□□□□ -1.11
POLR2J3-201ENST00000379340 A0A1B0GXF2 115 aa8.13□□□□□ -1.11
POLR2J3-201ENST00000379340 GRIFINA4D1Z8 144 aa8.13□□□□□ -1.11
POLR2J3-201ENST00000379340 A6NDX4 124 aa8.13□□□□□ -1.11
POLR2J3-201ENST00000379340 G3V318 75 aa8.13□□□□□ -1.11
POLR2J3-201ENST00000379340 LY6G6DO95868 133 aa8.13□□□□□ -1.11
POLR2J3-201ENST00000379340 CLEC3BP05452 202 aa8.13□□□□□ -1.11
POLR2J3-201ENST00000379340 HBBP68871 147 aa8.13□□□□□ -1.11
POLR2J3-201ENST00000379340 SLC35B1P78383 322 aa8.13□□□□□ -1.11
POLR2J3-201ENST00000379340 TOMM20LQ6UXN7 152 aa8.13□□□□□ -1.11
POLR2J3-201ENST00000379340 BRD3OSQ6XYD6 125 aa8.13□□□□□ -1.11
POLR2J3-201ENST00000379340 RBPMS2Q6ZRY4 209 aaKnown RBP8.13□□□□□ -1.11
POLR2J3-201ENST00000379340 TMEM256Q8N2U0 113 aa8.13□□□□□ -1.11
POLR2J3-201ENST00000379340 CCDC140Q96MF4 163 aa8.13□□□□□ -1.11
POLR2J3-201ENST00000379340 MXRA5Q9NR99 2828 aa8.13□□□□□ -1.11
POLR2J3-201ENST00000379340 ZANQ9Y493 2812 aa8.13□□□□□ -1.11
POLR2J3-201ENST00000379340 IGHV3OR16-10A0A075B7F0 116 aa8.12□□□□□ -1.11
POLR2J3-201ENST00000379340 TRAV8-1A0A0A6YYK1 113 aa8.12□□□□□ -1.11
POLR2J3-201ENST00000379340 J3QLI3 93 aa8.12□□□□□ -1.11
POLR2J3-201ENST00000379340 SERF1AO75920 110 aa8.12□□□□□ -1.11
POLR2J3-201ENST00000379340 IGHG2P01859 326 aa8.12□□□□□ -1.11
POLR2J3-201ENST00000379340 FRMD6-AS1P0C7T7 363 aa8.12□□□□□ -1.11
POLR2J3-201ENST00000379340 CT45A10P0DMU9 189 aa8.12□□□□□ -1.11
POLR2J3-201ENST00000379340 IGHV4-38-2P0DP08 117 aa8.12□□□□□ -1.11
POLR2J3-201ENST00000379340 GZMBP10144 247 aa8.12□□□□□ -1.11
POLR2J3-201ENST00000379340 FOXA3P55318 350 aaPredicted RBP8.12□□□□□ -1.11
POLR2J3-201ENST00000379340 IQCJQ1A5X6 159 aa8.12□□□□□ -1.11
POLR2J3-201ENST00000379340 SAPCD1Q5SSQ6 148 aa8.12□□□□□ -1.11
POLR2J3-201ENST00000379340 Q6AWC8 147 aa8.12□□□□□ -1.11
POLR2J3-201ENST00000379340 LINC00322Q6ZN03 302 aaPredicted RBP8.12□□□□□ -1.11
POLR2J3-201ENST00000379340 COX8CQ7Z4L0 72 aa8.12□□□□□ -1.11
POLR2J3-201ENST00000379340 TMEM219Q86XT9 240 aa8.12□□□□□ -1.11
POLR2J3-201ENST00000379340 CIARTQ8N365 385 aaPredicted RBP8.12□□□□□ -1.11
POLR2J3-201ENST00000379340 SLC50A1Q9BRV3 221 aa8.12□□□□□ -1.11
POLR2J3-201ENST00000379340 ZNF580Q9UK33 172 aa8.12□□□□□ -1.11
POLR2J3-201ENST00000379340 TP53TG3Q9ULZ0 132 aa8.12□□□□□ -1.11
POLR2J3-201ENST00000379340 A0A1B0GW15 77 aa8.11□□□□□ -1.11
POLR2J3-201ENST00000379340 LINC01548A6NM66 108 aa8.11□□□□□ -1.11
POLR2J3-201ENST00000379340 BUB3O43684 328 aa8.11□□□□□ -1.11
POLR2J3-201ENST00000379340 FAM162BQ5T6X4 162 aa8.11□□□□□ -1.11
POLR2J3-201ENST00000379340 CLEC19AQ6UXS0 136 aa8.11□□□□□ -1.11
POLR2J3-201ENST00000379340 BCL6BQ8N143 479 aaPredicted RBP8.11□□□□□ -1.11
POLR2J3-201ENST00000379340 LINC01356Q8N9X3 169 aa8.11□□□□□ -1.11
POLR2J3-201ENST00000379340 OR2D3Q8NGH3 330 aa8.11□□□□□ -1.11
POLR2J3-201ENST00000379340 ZC2HC1AQ96GY0 325 aa8.11□□□□□ -1.11
POLR2J3-201ENST00000379340 USMG5Q96IX5 58 aa8.11□□□□□ -1.11
POLR2J3-201ENST00000379340 METTL26Q96S19 204 aa8.11□□□□□ -1.11
POLR2J3-201ENST00000379340 PRDM13Q9H4Q3 707 aa8.11□□□□□ -1.11
POLR2J3-201ENST00000379340 GNB4Q9HAV0 340 aa8.11□□□□□ -1.11
POLR2J3-201ENST00000379340 HIF1ANQ9NWT6 349 aa8.11□□□□□ -1.11
POLR2J3-201ENST00000379340 H3BUX3 64 aa8.1□□□□□ -1.11
POLR2J3-201ENST00000379340 SRIP30626 198 aa8.1□□□□□ -1.11
POLR2J3-201ENST00000379340 PKIAP61925 76 aa8.1□□□□□ -1.11
POLR2J3-201ENST00000379340 KLF5Q13887 457 aaPredicted RBP8.1□□□□□ -1.11
POLR2J3-201ENST00000379340 KCNS1Q96KK3 526 aa8.1□□□□□ -1.11
POLR2J3-201ENST00000379340 MS4A10Q96PG2 267 aa8.1□□□□□ -1.11
POLR2J3-201ENST00000379340 CLEC5AQ9NY25 188 aa8.1□□□□□ -1.11
POLR2J3-201ENST00000379340 SMAD5-AS1Q9Y6J3 95 aa8.1□□□□□ -1.11
POLR2J3-201ENST00000379340 ABCA1O95477 2261 aa8.1□□□□□ -1.11
POLR2J3-201ENST00000379340 HIVEP2P31629 2446 aa8.1□□□□□ -1.11
POLR2J3-201ENST00000379340 RBAKDNA6NC62 111 aa8.1□□□□□ -1.11
POLR2J3-201ENST00000379340 SH2D7A6NKC9 451 aaPredicted RBP8.1□□□□□ -1.11
POLR2J3-201ENST00000379340 ZNF785A8K8V0 405 aa8.1□□□□□ -1.11
POLR2J3-201ENST00000379340 TSTD3H0UI37 97 aa8.1□□□□□ -1.11
POLR2J3-201ENST00000379340 M0R3E3 92 aa8.1□□□□□ -1.11
POLR2J3-201ENST00000379340 CHEK1O14757 476 aa8.1□□□□□ -1.11
POLR2J3-201ENST00000379340 NUPR1O60356 82 aa8.1□□□□□ -1.11
POLR2J3-201ENST00000379340 TRGV3P03979 118 aa8.1□□□□□ -1.11
POLR2J3-201ENST00000379340 LINC00310P59036 64 aa8.1□□□□□ -1.11
POLR2J3-201ENST00000379340 SLAQ13239 276 aa8.1□□□□□ -1.11
POLR2J3-201ENST00000379340 DEFB113Q30KQ7 82 aa8.1□□□□□ -1.11
POLR2J3-201ENST00000379340 C9orf152Q5JTZ5 239 aa8.1□□□□□ -1.11
POLR2J3-201ENST00000379340 TCF24Q7RTU0 167 aa8.1□□□□□ -1.11
POLR2J3-201ENST00000379340 GTSF1Q8WW33 167 aa8.1□□□□□ -1.11
POLR2J3-201ENST00000379340 MRPL53Q96EL3 112 aaKnown RBP8.1□□□□□ -1.11
POLR2J3-201ENST00000379340 U3KQE9 123 aa8.1□□□□□ -1.11
POLR2J3-201ENST00000379340 A0A1B0GUS0 222 aa8.09□□□□□ -1.11
POLR2J3-201ENST00000379340 CLPSL1A2RUU4 121 aa8.09□□□□□ -1.11
POLR2J3-201ENST00000379340 A8MWP6 167 aa8.09□□□□□ -1.11
POLR2J3-201ENST00000379340 LINC00587B1AMM8 73 aa8.09□□□□□ -1.11
POLR2J3-201ENST00000379340 RPS20P60866 119 aaKnown RBP8.09□□□□□ -1.11
POLR2J3-201ENST00000379340 SRSF2Q01130 221 aaKnown RBP8.09□□□□□ -1.11
POLR2J3-201ENST00000379340 KIAA1644Q3SXP7 199 aa8.09□□□□□ -1.11
POLR2J3-201ENST00000379340 FAM209BQ5JX69 171 aa8.09□□□□□ -1.11
POLR2J3-201ENST00000379340 DMRTA1Q5VZB9 504 aa8.09□□□□□ -1.11
POLR2J3-201ENST00000379340 CDPF1Q6NVV7 123 aa8.09□□□□□ -1.11
POLR2J3-201ENST00000379340 GATD1Q8NB37 220 aa8.09□□□□□ -1.11
POLR2J3-201ENST00000379340 PGLYRP4Q96LB8 373 aa8.09□□□□□ -1.11
POLR2J3-201ENST00000379340 NOL4LQ96MY1 436 aaPredicted RBP8.09□□□□□ -1.11
POLR2J3-201ENST00000379340 NDFIP1Q9BT67 221 aa8.09□□□□□ -1.11
POLR2J3-201ENST00000379340 SAMD10Q9BYL1 202 aa8.09□□□□□ -1.11
POLR2J3-201ENST00000379340 BEX4Q9NWD9 120 aaPredicted RBP8.09□□□□□ -1.11
POLR2J3-201ENST00000379340 SONP18583 2426 aaKnown RBP8.09□□□□□ -1.11
POLR2J3-201ENST00000379340 A0A096LNT2 108 aa8.08□□□□□ -1.12
POLR2J3-201ENST00000379340 INAFM1C9JVW0 142 aa8.08□□□□□ -1.12
POLR2J3-201ENST00000379340 NDUFA4O00483 81 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms