RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 RNF182Q8N6D2 247 aa13.24□□□□□ -0.29
THUMPD2-201ENST00000378727 ARL6IP6Q8N6S5 226 aa13.24□□□□□ -0.29
THUMPD2-201ENST00000378727 KLHDC1Q8N7A1 406 aa13.24□□□□□ -0.29
THUMPD2-201ENST00000378727 TMEM160Q9NX00 188 aa13.24□□□□□ -0.29
THUMPD2-201ENST00000378727 IGKV2-40A0A087WW87 121 aaPredicted RBP13.23□□□□□ -0.29
THUMPD2-201ENST00000378727 ZNF705GA8MUZ8 300 aaPredicted RBP13.23□□□□□ -0.29
THUMPD2-201ENST00000378727 IGKV2D-40P01614 121 aaPredicted RBP13.23□□□□□ -0.29
THUMPD2-201ENST00000378727 RPEL1Q2QD12 228 aa13.23□□□□□ -0.29
THUMPD2-201ENST00000378727 C8orf86Q6ZUL3 223 aa13.23□□□□□ -0.29
THUMPD2-201ENST00000378727 SLC50A1Q9BRV3 221 aa13.23□□□□□ -0.29
THUMPD2-201ENST00000378727 DAZ1Q9NQZ3 744 aaKnown RBP13.23□□□□□ -0.29
THUMPD2-201ENST00000378727 MTORP42345 2549 aa13.23□□□□□ -0.29
THUMPD2-201ENST00000378727 IGHV7-4-1A0A0J9YVY3 117 aa13.22□□□□□ -0.29
THUMPD2-201ENST00000378727 PHOX2AO14813 284 aa13.22□□□□□ -0.29
THUMPD2-201ENST00000378727 CA1P00915 261 aaPredicted RBP13.22□□□□□ -0.29
THUMPD2-201ENST00000378727 EDN2P20800 178 aa13.22□□□□□ -0.29
THUMPD2-201ENST00000378727 FAM106AQ4KMX7 169 aa13.22□□□□□ -0.29
THUMPD2-201ENST00000378727 LCN12Q6JVE5 192 aa13.22□□□□□ -0.29
THUMPD2-201ENST00000378727 SERTM2A0A1B0GWG4 89 aa13.22□□□□□ -0.29
THUMPD2-201ENST00000378727 ZFP30Q9Y2G7 519 aa13.22□□□□□ -0.29
THUMPD2-201ENST00000378727 C19orf71A6NCJ1 209 aa13.21□□□□□ -0.29
THUMPD2-201ENST00000378727 K7EMT4 169 aa13.21□□□□□ -0.29
THUMPD2-201ENST00000378727 LY6G6DO95868 133 aa13.21□□□□□ -0.29
THUMPD2-201ENST00000378727 MEOX2P50222 304 aa13.21□□□□□ -0.29
THUMPD2-201ENST00000378727 TCTEX1D4Q5JR98 221 aa13.21□□□□□ -0.29
THUMPD2-201ENST00000378727 ZNF492Q9P255 531 aa13.21□□□□□ -0.29
THUMPD2-201ENST00000378727 IGHV4OR15-8A0A075B7B6 117 aa13.2□□□□□ -0.3
THUMPD2-201ENST00000378727 A0A087WW49 117 aa13.2□□□□□ -0.3
THUMPD2-201ENST00000378727 SMIM27A0A1W2PRY6 76 aa13.2□□□□□ -0.3
THUMPD2-201ENST00000378727 A0A1W2PS18 150 aa13.2□□□□□ -0.3
THUMPD2-201ENST00000378727 PRAC2D3DTV9 90 aa13.2□□□□□ -0.3
THUMPD2-201ENST00000378727 GATCO43716 136 aaKnown RBP13.2□□□□□ -0.3
THUMPD2-201ENST00000378727 ZC2HC1AQ96GY0 325 aa13.2□□□□□ -0.3
THUMPD2-201ENST00000378727 GRAMD2BQ96HH9 432 aa13.2□□□□□ -0.3
THUMPD2-201ENST00000378727 RHPN1-AS1Q9BWJ2 59 aa13.2□□□□□ -0.3
THUMPD2-201ENST00000378727 TRAV9-1A0A075B6T8 112 aa13.2□□□□□ -0.3
THUMPD2-201ENST00000378727 C18orf65Q6ZTR6 163 aa13.2□□□□□ -0.3
THUMPD2-201ENST00000378727 VGLL1Q99990 258 aa13.2□□□□□ -0.3
THUMPD2-201ENST00000378727 SMPXQ9UHP9 88 aa13.2□□□□□ -0.3
THUMPD2-201ENST00000378727 TCL1AP56279 114 aa13.19□□□□□ -0.3
THUMPD2-201ENST00000378727 FRZBQ92765 325 aa13.19□□□□□ -0.3
THUMPD2-201ENST00000378727 BIN3Q9NQY0 253 aa13.19□□□□□ -0.3
THUMPD2-201ENST00000378727 NF1P21359 2839 aa13.19□□□□□ -0.3
THUMPD2-201ENST00000378727 RNASE1P07998 156 aaKnown RBP13.19□□□□□ -0.3
THUMPD2-201ENST00000378727 SRD5A1P18405 259 aa13.19□□□□□ -0.3
THUMPD2-201ENST00000378727 BTF3L4Q96K17 158 aa13.19□□□□□ -0.3
THUMPD2-201ENST00000378727 C8orf49Q96NF6 230 aa13.19□□□□□ -0.3
THUMPD2-201ENST00000378727 SCGB2A2Q13296 93 aa13.18□□□□□ -0.3
THUMPD2-201ENST00000378727 UFC1Q9Y3C8 167 aa13.18□□□□□ -0.3
THUMPD2-201ENST00000378727 SELENOKQ9Y6D0 94 aa13.18□□□□□ -0.3
THUMPD2-201ENST00000378727 TMEM213A2RRL7 107 aa13.17□□□□□ -0.3
THUMPD2-201ENST00000378727 SOCS3O14543 225 aa13.17□□□□□ -0.3
THUMPD2-201ENST00000378727 HIST1H2BKO60814 126 aa13.17□□□□□ -0.3
THUMPD2-201ENST00000378727 HIST1H2BJP06899 126 aa13.17□□□□□ -0.3
THUMPD2-201ENST00000378727 FRMD6-AS1P0C7T7 363 aa13.17□□□□□ -0.3
THUMPD2-201ENST00000378727 HIST1H2BOP23527 126 aa13.17□□□□□ -0.3
THUMPD2-201ENST00000378727 HIST1H2BBP33778 126 aa13.17□□□□□ -0.3
THUMPD2-201ENST00000378727 HIST1H2BDP58876 126 aa13.17□□□□□ -0.3
THUMPD2-201ENST00000378727 HIST1H2BCP62807 126 aa13.17□□□□□ -0.3
THUMPD2-201ENST00000378727 HIST2H2BEQ16778 126 aa13.17□□□□□ -0.3
THUMPD2-201ENST00000378727 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.17□□□□□ -0.3
THUMPD2-201ENST00000378727 GBGT1Q8N5D6 347 aa13.17□□□□□ -0.3
THUMPD2-201ENST00000378727 Q8TAT8 98 aa13.17□□□□□ -0.3
THUMPD2-201ENST00000378727 WIPF2Q8TF74 440 aaPredicted RBP13.17□□□□□ -0.3
THUMPD2-201ENST00000378727 HIST1H2BHQ93079 126 aa13.17□□□□□ -0.3
THUMPD2-201ENST00000378727 HIST1H2BNQ99877 126 aa13.17□□□□□ -0.3
THUMPD2-201ENST00000378727 HIST1H2BMQ99879 126 aa13.17□□□□□ -0.3
THUMPD2-201ENST00000378727 RPP21Q9H633 154 aaKnown RBP13.17□□□□□ -0.3
THUMPD2-201ENST00000378727 HIVEP2P31629 2446 aa13.17□□□□□ -0.3
THUMPD2-201ENST00000378727 NPIPB6E9PJ23 425 aa13.17□□□□□ -0.3
THUMPD2-201ENST00000378727 P01737 135 aa13.17□□□□□ -0.3
THUMPD2-201ENST00000378727 HOXD3P31249 432 aaPredicted RBP13.17□□□□□ -0.3
THUMPD2-201ENST00000378727 CDX1P47902 265 aaPredicted RBP13.17□□□□□ -0.3
THUMPD2-201ENST00000378727 CRIP1P50238 77 aa13.17□□□□□ -0.3
THUMPD2-201ENST00000378727 ACTL10Q5JWF8 245 aa13.17□□□□□ -0.3
THUMPD2-201ENST00000378727 MRPL53Q96EL3 112 aaKnown RBP13.17□□□□□ -0.3
THUMPD2-201ENST00000378727 C16orf92Q96LL3 132 aa13.17□□□□□ -0.3
THUMPD2-201ENST00000378727 TRGC1P0CF51 173 aa13.16□□□□□ -0.3
THUMPD2-201ENST00000378727 SYNJ2BPP57105 145 aa13.16□□□□□ -0.3
THUMPD2-201ENST00000378727 SNRPEP62304 92 aaKnown RBP13.16□□□□□ -0.3
THUMPD2-201ENST00000378727 ERCC8Q13216 396 aa13.16□□□□□ -0.3
THUMPD2-201ENST00000378727 DEFB136Q30KP8 78 aa13.16□□□□□ -0.3
THUMPD2-201ENST00000378727 REC114Q7Z4M0 266 aa13.16□□□□□ -0.3
THUMPD2-201ENST00000378727 TSKUQ8WUA8 353 aa13.16□□□□□ -0.3
THUMPD2-201ENST00000378727 C20orf173Q96LM9 149 aa13.16□□□□□ -0.3
THUMPD2-201ENST00000378727 PRR25Q96S07 402 aa13.16□□□□□ -0.3
THUMPD2-201ENST00000378727 RBAKDNA6NC62 111 aa13.16□□□□□ -0.3
THUMPD2-201ENST00000378727 FBLL1A6NHQ2 334 aaKnown RBP13.16□□□□□ -0.3
THUMPD2-201ENST00000378727 A8MWP6 167 aa13.16□□□□□ -0.3
THUMPD2-201ENST00000378727 HILS1P60008 231 aa13.16□□□□□ -0.3
THUMPD2-201ENST00000378727 HIST2H2BDQ6DRA6 164 aa13.16□□□□□ -0.3
THUMPD2-201ENST00000378727 COX8CQ7Z4L0 72 aa13.16□□□□□ -0.3
THUMPD2-201ENST00000378727 DAZAP1Q96EP5 407 aaKnown RBP13.16□□□□□ -0.3
THUMPD2-201ENST00000378727 SAV1Q9H4B6 383 aaPredicted RBP13.16□□□□□ -0.3
THUMPD2-201ENST00000378727 NRN1Q9NPD7 142 aa13.16□□□□□ -0.3
THUMPD2-201ENST00000378727 C5orf52A6NGY3 159 aa13.15□□□□□ -0.3
THUMPD2-201ENST00000378727 LGALS9O00182 355 aa13.15□□□□□ -0.3
THUMPD2-201ENST00000378727 SPINK4O60575 86 aa13.15□□□□□ -0.3
THUMPD2-201ENST00000378727 ZNF418Q8TF45 676 aaPredicted RBP13.15□□□□□ -0.3
THUMPD2-201ENST00000378727 GPR61Q9BZJ8 451 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms