RNA–Protein interactions for RNA: ENST00000378244.6

DEPDC4-202, Transcript of DEP domain containing 4, humanhuman

TSL 2

Gene DEPDC4, Length 2,337 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-202ENST00000378244 SAMD13Q5VXD3 122 aa8.62□□□□□ -1.03
DEPDC4-202ENST00000378244 C9orf62Q8N4C0 152 aa8.62□□□□□ -1.03
DEPDC4-202ENST00000378244 RPUSD4Q96CM3 377 aaKnown RBP8.62□□□□□ -1.03
DEPDC4-202ENST00000378244 PHYHIPLQ96FC7 376 aa8.62□□□□□ -1.03
DEPDC4-202ENST00000378244 CSTL1Q9H114 145 aa8.62□□□□□ -1.03
DEPDC4-202ENST00000378244 CA1P00915 261 aaPredicted RBP8.62□□□□□ -1.03
DEPDC4-202ENST00000378244 TPT1P13693 172 aaKnown RBP8.62□□□□□ -1.03
DEPDC4-202ENST00000378244 APOC4P55056 127 aa8.62□□□□□ -1.03
DEPDC4-202ENST00000378244 GUK1Q16774 197 aa8.62□□□□□ -1.03
DEPDC4-202ENST00000378244 SMUG1Q53HV7 270 aa8.62□□□□□ -1.03
DEPDC4-202ENST00000378244 TRPT1Q86TN4 253 aaKnown RBP8.62□□□□□ -1.03
DEPDC4-202ENST00000378244 SLC50A1Q9BRV3 221 aa8.62□□□□□ -1.03
DEPDC4-202ENST00000378244 ACTR3CQ9C0K3 210 aaPredicted RBP8.62□□□□□ -1.03
DEPDC4-202ENST00000378244 SAV1Q9H4B6 383 aaPredicted RBP8.62□□□□□ -1.03
DEPDC4-202ENST00000378244 CLEC5AQ9NY25 188 aa8.62□□□□□ -1.03
DEPDC4-202ENST00000378244 PLA2G2EQ9NZK7 142 aa8.62□□□□□ -1.03
DEPDC4-202ENST00000378244 BOLA1Q9Y3E2 137 aa8.62□□□□□ -1.03
DEPDC4-202ENST00000378244 PRAC2D3DTV9 90 aa8.61□□□□□ -1.03
DEPDC4-202ENST00000378244 HLA-DRB4P13762 266 aa8.61□□□□□ -1.03
DEPDC4-202ENST00000378244 HIST1H1AQ02539 215 aaPredicted RBP8.61□□□□□ -1.03
DEPDC4-202ENST00000378244 ICAM4Q14773 271 aa8.61□□□□□ -1.03
DEPDC4-202ENST00000378244 ZNF726P1Q15940 193 aa8.61□□□□□ -1.03
DEPDC4-202ENST00000378244 FOXI2Q6ZQN5 318 aa8.61□□□□□ -1.03
DEPDC4-202ENST00000378244 HLA-DRB4X5D2U9 266 aa8.61□□□□□ -1.03
DEPDC4-202ENST00000378244 A0A0J9YX75 114 aa8.6□□□□□ -1.03
DEPDC4-202ENST00000378244 A0A1B0GV50 99 aa8.6□□□□□ -1.03
DEPDC4-202ENST00000378244 CNN1P51911 297 aaKnown RBP8.6□□□□□ -1.03
DEPDC4-202ENST00000378244 FGF8P55075 233 aaPredicted RBP8.6□□□□□ -1.03
DEPDC4-202ENST00000378244 AAMDCQ9H7C9 122 aa8.6□□□□□ -1.03
DEPDC4-202ENST00000378244 ZMAT4Q9H898 229 aa8.6□□□□□ -1.03
DEPDC4-202ENST00000378244 XCL2Q9UBD3 114 aa8.6□□□□□ -1.03
DEPDC4-202ENST00000378244 SEC11BP0C7V7 166 aa8.6□□□□□ -1.03
DEPDC4-202ENST00000378244 STAG3L2P0CL84 134 aa8.6□□□□□ -1.03
DEPDC4-202ENST00000378244 STAG3L3P0CL85 134 aa8.6□□□□□ -1.03
DEPDC4-202ENST00000378244 EIF5AP63241 154 aaKnown RBP8.6□□□□□ -1.03
DEPDC4-202ENST00000378244 PQLC2Q6ZP29 291 aa8.6□□□□□ -1.03
DEPDC4-202ENST00000378244 TM2D3Q9BRN9 247 aa8.6□□□□□ -1.03
DEPDC4-202ENST00000378244 SLC35B3Q9H1N7 401 aa8.6□□□□□ -1.03
DEPDC4-202ENST00000378244 OR8A1Q8NGG7 326 aa8.59□□□□□ -1.03
DEPDC4-202ENST00000378244 FAM213BQ8TBF2 198 aa8.59□□□□□ -1.03
DEPDC4-202ENST00000378244 TMPRSS5Q9H3S3 457 aa8.59□□□□□ -1.03
DEPDC4-202ENST00000378244 KIR2DL5BA0A0G2JN68 375 aa8.59□□□□□ -1.03
DEPDC4-202ENST00000378244 KIR2DL5BA0A0G2JPC4 375 aa8.59□□□□□ -1.03
DEPDC4-202ENST00000378244 C4BPBP20851 252 aa8.59□□□□□ -1.03
DEPDC4-202ENST00000378244 PSG9Q00887 426 aa8.59□□□□□ -1.03
DEPDC4-202ENST00000378244 PDE6HQ13956 83 aa8.59□□□□□ -1.03
DEPDC4-202ENST00000378244 KIR2DL5AQ8N109 375 aa8.59□□□□□ -1.03
DEPDC4-202ENST00000378244 KIR2DL5BQ8NHK3 375 aa8.59□□□□□ -1.03
DEPDC4-202ENST00000378244 RCHY1Q96PM5 261 aa8.59□□□□□ -1.03
DEPDC4-202ENST00000378244 SPATA25Q9BR10 227 aa8.59□□□□□ -1.03
DEPDC4-202ENST00000378244 DNAH9Q9NYC9 4486 aa8.59□□□□□ -1.03
DEPDC4-202ENST00000378244 UBE2CO00762 179 aa8.58□□□□□ -1.04
DEPDC4-202ENST00000378244 S100A6P06703 90 aa8.58□□□□□ -1.04
DEPDC4-202ENST00000378244 NHLRC4P0CG21 123 aaPredicted RBP8.58□□□□□ -1.04
DEPDC4-202ENST00000378244 GCHFRP30047 84 aa8.58□□□□□ -1.04
DEPDC4-202ENST00000378244 NUTF2P61970 127 aaKnown RBP8.58□□□□□ -1.04
DEPDC4-202ENST00000378244 Q9H3A6 140 aa8.58□□□□□ -1.04
DEPDC4-202ENST00000378244 RPH3ALQ9UNE2 315 aa8.58□□□□□ -1.04
DEPDC4-202ENST00000378244 PRELID1Q9Y255 219 aa8.58□□□□□ -1.04
DEPDC4-202ENST00000378244 CTXND1A0A1B0GTU2 59 aa8.58□□□□□ -1.04
DEPDC4-202ENST00000378244 M0R2Z0 102 aa8.58□□□□□ -1.04
DEPDC4-202ENST00000378244 CXorf1O96002 111 aa8.58□□□□□ -1.04
DEPDC4-202ENST00000378244 GIG44P09565 113 aaPredicted RBP8.58□□□□□ -1.04
DEPDC4-202ENST00000378244 SLC51BQ86UW2 128 aa8.58□□□□□ -1.04
DEPDC4-202ENST00000378244 STOML3Q8TAV4 291 aa8.58□□□□□ -1.04
DEPDC4-202ENST00000378244 SFT2D1Q8WV19 159 aa8.58□□□□□ -1.04
DEPDC4-202ENST00000378244 MAP1LC3B2A6NCE7 125 aa8.57□□□□□ -1.04
DEPDC4-202ENST00000378244 PGPA6NDG6 321 aa8.57□□□□□ -1.04
DEPDC4-202ENST00000378244 ZNF253O75346 499 aa8.57□□□□□ -1.04
DEPDC4-202ENST00000378244 SPINK13Q1W4C9 94 aa8.57□□□□□ -1.04
DEPDC4-202ENST00000378244 FAM74A1Q5RGS3 127 aa8.57□□□□□ -1.04
DEPDC4-202ENST00000378244 OR10J6PQ8NGY7 276 aa8.57□□□□□ -1.04
DEPDC4-202ENST00000378244 MAP1LC3BQ9GZQ8 125 aa8.57□□□□□ -1.04
DEPDC4-202ENST00000378244 PPP1R14DQ9NXH3 145 aa8.57□□□□□ -1.04
DEPDC4-202ENST00000378244 U3KQK5 164 aa8.57□□□□□ -1.04
DEPDC4-202ENST00000378244 IGHV3OR16-12A0A075B7B8 117 aa8.57□□□□□ -1.04
DEPDC4-202ENST00000378244 IGKV2-40A0A087WW87 121 aaPredicted RBP8.57□□□□□ -1.04
DEPDC4-202ENST00000378244 UMAD1C9J7I0 102 aa8.57□□□□□ -1.04
DEPDC4-202ENST00000378244 IGKV2D-40P01614 121 aaPredicted RBP8.57□□□□□ -1.04
DEPDC4-202ENST00000378244 UBE2G2P60604 165 aa8.57□□□□□ -1.04
DEPDC4-202ENST00000378244 ERCC8Q13216 396 aa8.57□□□□□ -1.04
DEPDC4-202ENST00000378244 Q6ZWC4 215 aa8.57□□□□□ -1.04
DEPDC4-202ENST00000378244 OVOL2Q9BRP0 275 aa8.57□□□□□ -1.04
DEPDC4-202ENST00000378244 CHTOPQ9Y3Y2 248 aaKnown RBP8.57□□□□□ -1.04
DEPDC4-202ENST00000378244 TRAV12-2A0A075B6T6 113 aa8.56□□□□□ -1.04
DEPDC4-202ENST00000378244 SPRY2O43597 315 aa8.56□□□□□ -1.04
DEPDC4-202ENST00000378244 DUSP14O95147 198 aaKnown RBP8.55□□□□□ -1.04
DEPDC4-202ENST00000378244 EIF5AL1Q6IS14 154 aaKnown RBP8.55□□□□□ -1.04
DEPDC4-202ENST00000378244 MORN3Q6PF18 240 aaPredicted RBP8.55□□□□□ -1.04
DEPDC4-202ENST00000378244 ALKAL2Q6UX46 152 aa8.55□□□□□ -1.04
DEPDC4-202ENST00000378244 SUMO1P63165 101 aaKnown RBP8.55□□□□□ -1.04
DEPDC4-202ENST00000378244 GNG5P63218 68 aa8.55□□□□□ -1.04
DEPDC4-202ENST00000378244 KIR3DS1Q14943 382 aa8.55□□□□□ -1.04
DEPDC4-202ENST00000378244 AMTNQ6UX39 209 aa8.55□□□□□ -1.04
DEPDC4-202ENST00000378244 CMTM2Q8TAZ6 248 aa8.55□□□□□ -1.04
DEPDC4-202ENST00000378244 RNF183Q96D59 192 aa8.55□□□□□ -1.04
DEPDC4-202ENST00000378244 RARRES2Q99969 163 aa8.55□□□□□ -1.04
DEPDC4-202ENST00000378244 VGLL1Q99990 258 aa8.55□□□□□ -1.04
DEPDC4-202ENST00000378244 DEFB4AO15263 64 aa8.54□□□□□ -1.04
DEPDC4-202ENST00000378244 H2AFB1P0C5Y9 115 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms