RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 ARFGEF3Q5TH69 2177 aa13.19□□□□□ -0.3
RGP1-201ENST00000378078 CRYGCP07315 174 aa13.19□□□□□ -0.3
RGP1-201ENST00000378078 LAIR2Q6ISS4 152 aa13.19□□□□□ -0.3
RGP1-201ENST00000378078 HEPN1Q6WQI6 88 aa13.19□□□□□ -0.3
RGP1-201ENST00000378078 TRPT1Q86TN4 253 aaKnown RBP13.19□□□□□ -0.3
RGP1-201ENST00000378078 C9orf139Q6ZV77 190 aa13.18□□□□□ -0.3
RGP1-201ENST00000378078 APRG1Q8IVJ8 170 aa13.18□□□□□ -0.3
RGP1-201ENST00000378078 GREB1LQ9C091 1923 aaPredicted RBP13.18□□□□□ -0.3
RGP1-201ENST00000378078 TRGV9Q99603 122 aa13.18□□□□□ -0.3
RGP1-201ENST00000378078 AGMATQ9BSE5 352 aa13.18□□□□□ -0.3
RGP1-201ENST00000378078 ARTNQ5T4W7 220 aa13.17□□□□□ -0.3
RGP1-201ENST00000378078 LY6G5BQ8NDX9 201 aa13.17□□□□□ -0.3
RGP1-201ENST00000378078 SEC11AP67812 179 aa13.17□□□□□ -0.3
RGP1-201ENST00000378078 A0A087WWC5 75 aa13.17□□□□□ -0.3
RGP1-201ENST00000378078 KIR3DS1Q14943 382 aa13.17□□□□□ -0.3
RGP1-201ENST00000378078 NRGNQ92686 78 aa13.17□□□□□ -0.3
RGP1-201ENST00000378078 HLA-DRB4P13762 266 aa13.17□□□□□ -0.3
RGP1-201ENST00000378078 TMEM243Q9BU79 118 aa13.17□□□□□ -0.3
RGP1-201ENST00000378078 HLA-DRB4X5D2U9 266 aa13.17□□□□□ -0.3
RGP1-201ENST00000378078 GTF3C1Q12789 2109 aa13.17□□□□□ -0.3
RGP1-201ENST00000378078 FAM90A9PA6NNJ1 464 aa13.17□□□□□ -0.3
RGP1-201ENST00000378078 DEFB4AO15263 64 aa13.17□□□□□ -0.3
RGP1-201ENST00000378078 HIST1H2BKO60814 126 aa13.16□□□□□ -0.3
RGP1-201ENST00000378078 HIST1H2BJP06899 126 aa13.16□□□□□ -0.3
RGP1-201ENST00000378078 HIST1H2BOP23527 126 aa13.16□□□□□ -0.3
RGP1-201ENST00000378078 HIST1H2BBP33778 126 aa13.16□□□□□ -0.3
RGP1-201ENST00000378078 HIST1H2BDP58876 126 aa13.16□□□□□ -0.3
RGP1-201ENST00000378078 HIST1H2BCP62807 126 aa13.16□□□□□ -0.3
RGP1-201ENST00000378078 HIST2H2BEQ16778 126 aa13.16□□□□□ -0.3
RGP1-201ENST00000378078 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.16□□□□□ -0.3
RGP1-201ENST00000378078 HIST1H2BHQ93079 126 aa13.16□□□□□ -0.3
RGP1-201ENST00000378078 HIST1H2BNQ99877 126 aa13.16□□□□□ -0.3
RGP1-201ENST00000378078 HIST1H2BMQ99879 126 aa13.16□□□□□ -0.3
RGP1-201ENST00000378078 CHKB-CPT1BH3BT56 60 aa13.16□□□□□ -0.3
RGP1-201ENST00000378078 NDUFB8O95169 186 aa13.16□□□□□ -0.3
RGP1-201ENST00000378078 LINC00114Q6XXX2 140 aa13.16□□□□□ -0.3
RGP1-201ENST00000378078 FBLIM1Q8WUP2 373 aa13.16□□□□□ -0.3
RGP1-201ENST00000378078 DOCK11Q5JSL3 2073 aa13.16□□□□□ -0.3
RGP1-201ENST00000378078 IGHV1-69DA0A0B4J2H0 117 aa13.16□□□□□ -0.3
RGP1-201ENST00000378078 NTN3O00634 580 aaPredicted RBP13.16□□□□□ -0.3
RGP1-201ENST00000378078 IGHV1-69P01742 117 aa13.16□□□□□ -0.3
RGP1-201ENST00000378078 LCTP09848 1927 aa13.16□□□□□ -0.3
RGP1-201ENST00000378078 CHAC1Q9BUX1 264 aa13.16□□□□□ -0.3
RGP1-201ENST00000378078 TRAV9-1A0A075B6T8 112 aa13.15□□□□□ -0.3
RGP1-201ENST00000378078 SRRM5B3KS81 715 aa13.15□□□□□ -0.3
RGP1-201ENST00000378078 SOCS3O14543 225 aa13.15□□□□□ -0.3
RGP1-201ENST00000378078 COL24A1Q17RW2 1714 aa13.15□□□□□ -0.3
RGP1-201ENST00000378078 POLEQ07864 2286 aa13.15□□□□□ -0.3
RGP1-201ENST00000378078 H0YIZ8 118 aa13.15□□□□□ -0.3
RGP1-201ENST00000378078 LRCOL1A6NCL2 159 aa13.15□□□□□ -0.3
RGP1-201ENST00000378078 F8W735 103 aaPredicted RBP13.15□□□□□ -0.3
RGP1-201ENST00000378078 RNASE2P10153 161 aaKnown RBP13.15□□□□□ -0.3
RGP1-201ENST00000378078 I3L3M4 83 aa13.15□□□□□ -0.31
RGP1-201ENST00000378078 WFDC11Q8NEX6 87 aa13.14□□□□□ -0.31
RGP1-201ENST00000378078 ADAMTSL5Q6ZMM2 481 aa13.14□□□□□ -0.31
RGP1-201ENST00000378078 CACNA1DQ01668 2161 aa13.14□□□□□ -0.31
RGP1-201ENST00000378078 DOCK10Q96BY6 2186 aa13.14□□□□□ -0.31
RGP1-201ENST00000378078 IGHG4P01861 327 aa13.14□□□□□ -0.31
RGP1-201ENST00000378078 CARHSP1Q9Y2V2 147 aaKnown RBP13.14□□□□□ -0.31
RGP1-201ENST00000378078 RALGAPA2Q2PPJ7 1873 aa13.13□□□□□ -0.31
RGP1-201ENST00000378078 BAALCQ8WXS3 180 aa13.13□□□□□ -0.31
RGP1-201ENST00000378078 ALPK2Q86TB3 2170 aa13.13□□□□□ -0.31
RGP1-201ENST00000378078 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.13□□□□□ -0.31
RGP1-201ENST00000378078 IGKV2-29A2NJV5 120 aaPredicted RBP13.13□□□□□ -0.31
RGP1-201ENST00000378078 BUB3O43684 328 aa13.13□□□□□ -0.31
RGP1-201ENST00000378078 ZC2HC1BQ5TFG8 222 aa13.13□□□□□ -0.31
RGP1-201ENST00000378078 CD5P06127 495 aa13.13□□□□□ -0.31
RGP1-201ENST00000378078 FLVCR1-AS1Q8TAF5 88 aa13.13□□□□□ -0.31
RGP1-201ENST00000378078 HS3ST6Q96QI5 342 aa13.13□□□□□ -0.31
RGP1-201ENST00000378078 GFI1Q99684 422 aa13.13□□□□□ -0.31
RGP1-201ENST00000378078 A0A1B0GUS0 222 aa13.12□□□□□ -0.31
RGP1-201ENST00000378078 NDUFAF3Q9BU61 184 aa13.12□□□□□ -0.31
RGP1-201ENST00000378078 C8orf86Q6ZUL3 223 aa13.11□□□□□ -0.31
RGP1-201ENST00000378078 RMI2Q96E14 147 aa13.11□□□□□ -0.31
RGP1-201ENST00000378078 MYLKQ15746 1914 aa13.11□□□□□ -0.31
RGP1-201ENST00000378078 C9orf153Q5TBE3 101 aa13.11□□□□□ -0.31
RGP1-201ENST00000378078 TEX48A0A1B0GUV7 120 aa13.11□□□□□ -0.31
RGP1-201ENST00000378078 NACAE9PAV3 2078 aa13.11□□□□□ -0.31
RGP1-201ENST00000378078 MPV17L2Q567V2 206 aa13.11□□□□□ -0.31
RGP1-201ENST00000378078 WIPF3A6NGB9 483 aa13.11□□□□□ -0.31
RGP1-201ENST00000378078 F6UB75 175 aa13.11□□□□□ -0.31
RGP1-201ENST00000378078 A0A1W2PPI3 338 aa13.1□□□□□ -0.31
RGP1-201ENST00000378078 IGLV3-19P01714 112 aa13.1□□□□□ -0.31
RGP1-201ENST00000378078 HIST1H2BLQ99880 126 aa13.1□□□□□ -0.31
RGP1-201ENST00000378078 HELZP42694 1942 aaKnown RBP13.1□□□□□ -0.31
RGP1-201ENST00000378078 CRYGSP22914 178 aa13.1□□□□□ -0.31
RGP1-201ENST00000378078 OVOL2Q9BRP0 275 aa13.1□□□□□ -0.31
RGP1-201ENST00000378078 TPSG1Q9NRR2 321 aa13.1□□□□□ -0.31
RGP1-201ENST00000378078 IGLV3-12A0A075B6K2 115 aa13.1□□□□□ -0.31
RGP1-201ENST00000378078 BTCP35070 178 aa13.1□□□□□ -0.31
RGP1-201ENST00000378078 SLURP1P55000 103 aa13.1□□□□□ -0.31
RGP1-201ENST00000378078 TIRAPP58753 221 aa13.1□□□□□ -0.31
RGP1-201ENST00000378078 LY6G6FQ5SQ64 297 aa13.1□□□□□ -0.31
RGP1-201ENST00000378078 WDR83OSQ9Y284 106 aa13.1□□□□□ -0.31
RGP1-201ENST00000378078 Q6P435 159 aa13.09□□□□□ -0.31
RGP1-201ENST00000378078 DYSFO75923 2080 aa13.09□□□□□ -0.31
RGP1-201ENST00000378078 REG4Q9BYZ8 158 aa13.09□□□□□ -0.31
RGP1-201ENST00000378078 SDK2Q58EX2 2172 aa13.09□□□□□ -0.31
RGP1-201ENST00000378078 NRXN2Q9P2S2 1712 aa13.09□□□□□ -0.31
RGP1-201ENST00000378078 IGHV1OR15-1A0A075B7D0 117 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms