RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 ZFYVE26Q68DK2 2539 aa10.16□□□□□ -0.78
USP11-204ENST00000377107 C2orf70A6NJV1 201 aa10.16□□□□□ -0.78
USP11-204ENST00000377107 G3V318 75 aa10.16□□□□□ -0.78
USP11-204ENST00000377107 NBL1P41271 181 aa10.16□□□□□ -0.78
USP11-204ENST00000377107 CLEC19AQ6UXS0 136 aa10.16□□□□□ -0.78
USP11-204ENST00000377107 ZNF414Q96IQ9 312 aa10.16□□□□□ -0.78
USP11-204ENST00000377107 CLEC3BP05452 202 aa10.16□□□□□ -0.78
USP11-204ENST00000377107 CTRLP40313 264 aa10.16□□□□□ -0.78
USP11-204ENST00000377107 PRSS22Q9GZN4 317 aa10.16□□□□□ -0.78
USP11-204ENST00000377107 H3BRN7 92 aa10.15□□□□□ -0.78
USP11-204ENST00000377107 ZFP36P26651 326 aaKnown RBP10.15□□□□□ -0.78
USP11-204ENST00000377107 PVRIGQ6DKI7 326 aa10.15□□□□□ -0.78
USP11-204ENST00000377107 VGLL1Q99990 258 aa10.15□□□□□ -0.78
USP11-204ENST00000377107 MYO18BQ8IUG5 2567 aa10.15□□□□□ -0.78
USP11-204ENST00000377107 SORL1Q92673 2214 aa10.15□□□□□ -0.78
USP11-204ENST00000377107 IGLV2-11P01706 119 aa10.15□□□□□ -0.78
USP11-204ENST00000377107 UQCRFS1P47985 274 aa10.15□□□□□ -0.78
USP11-204ENST00000377107 ADORA2A-AS1P86434 159 aa10.15□□□□□ -0.78
USP11-204ENST00000377107 C15orf32Q32M92 178 aa10.15□□□□□ -0.78
USP11-204ENST00000377107 SH2D1AO60880 128 aa10.15□□□□□ -0.79
USP11-204ENST00000377107 CKS2P33552 79 aa10.15□□□□□ -0.79
USP11-204ENST00000377107 CRIP1P50238 77 aa10.15□□□□□ -0.79
USP11-204ENST00000377107 FAM162BQ5T6X4 162 aa10.15□□□□□ -0.79
USP11-204ENST00000377107 RABAC1Q9UI14 185 aa10.15□□□□□ -0.79
USP11-204ENST00000377107 A0A087X0K7 114 aa10.14□□□□□ -0.79
USP11-204ENST00000377107 FANCD2OSQ96PS1 177 aa10.14□□□□□ -0.79
USP11-204ENST00000377107 ZNF492Q9P255 531 aa10.14□□□□□ -0.79
USP11-204ENST00000377107 RNF24Q9Y225 148 aa10.14□□□□□ -0.79
USP11-204ENST00000377107 FOSL1P15407 271 aa10.14□□□□□ -0.79
USP11-204ENST00000377107 PRTN3P24158 256 aa10.14□□□□□ -0.79
USP11-204ENST00000377107 ZFP30Q9Y2G7 519 aa10.14□□□□□ -0.79
USP11-204ENST00000377107 EVI2AP22794 236 aa10.13□□□□□ -0.79
USP11-204ENST00000377107 LOXL1Q08397 574 aaPredicted RBP10.13□□□□□ -0.79
USP11-204ENST00000377107 KLF5Q13887 457 aaPredicted RBP10.13□□□□□ -0.79
USP11-204ENST00000377107 PRELID3AQ96N28 172 aa10.13□□□□□ -0.79
USP11-204ENST00000377107 C1RLQ9NZP8 487 aa10.13□□□□□ -0.79
USP11-204ENST00000377107 PIEZO1Q92508 2521 aa10.13□□□□□ -0.79
USP11-204ENST00000377107 RPL7P18124 248 aaKnown RBP10.13□□□□□ -0.79
USP11-204ENST00000377107 PLP1P60201 277 aa10.13□□□□□ -0.79
USP11-204ENST00000377107 RHOGP84095 191 aa10.13□□□□□ -0.79
USP11-204ENST00000377107 CCDC144NLQ6NUI1 221 aa10.13□□□□□ -0.79
USP11-204ENST00000377107 SLC25A34Q6PIV7 304 aa10.13□□□□□ -0.79
USP11-204ENST00000377107 S100A7AQ86SG5 101 aa10.13□□□□□ -0.79
USP11-204ENST00000377107 MSRB1Q9NZV6 116 aa10.13□□□□□ -0.79
USP11-204ENST00000377107 HSPB8Q9UJY1 196 aa10.13□□□□□ -0.79
USP11-204ENST00000377107 HRNRQ86YZ3 2850 aaPredicted RBP10.13□□□□□ -0.79
USP11-204ENST00000377107 KLRB1Q12918 225 aa10.13□□□□□ -0.79
USP11-204ENST00000377107 RNF151Q2KHN1 245 aa10.13□□□□□ -0.79
USP11-204ENST00000377107 ZNF562Q6V9R5 426 aa10.13□□□□□ -0.79
USP11-204ENST00000377107 LINC01548A6NM66 108 aa10.12□□□□□ -0.79
USP11-204ENST00000377107 LY6LH3BQJ8 138 aa10.12□□□□□ -0.79
USP11-204ENST00000377107 SPRY2O43597 315 aa10.12□□□□□ -0.79
USP11-204ENST00000377107 TMEM14CQ9P0S9 112 aa10.12□□□□□ -0.79
USP11-204ENST00000377107 UFC1Q9Y3C8 167 aa10.12□□□□□ -0.79
USP11-204ENST00000377107 SCGB2A1O75556 95 aa10.12□□□□□ -0.79
USP11-204ENST00000377107 LY6EQ16553 131 aa10.12□□□□□ -0.79
USP11-204ENST00000377107 CFHR4Q92496 578 aa10.12□□□□□ -0.79
USP11-204ENST00000377107 TRAV30A0A087WSZ9 112 aa10.12□□□□□ -0.79
USP11-204ENST00000377107 BRD3OSQ6XYD6 125 aa10.12□□□□□ -0.79
USP11-204ENST00000377107 NDFIP1Q9BT67 221 aa10.12□□□□□ -0.79
USP11-204ENST00000377107 SOX21Q9Y651 276 aaPredicted RBP10.12□□□□□ -0.79
USP11-204ENST00000377107 TLN2Q9Y4G6 2542 aa10.12□□□□□ -0.79
USP11-204ENST00000377107 OR10AG1Q8NH19 301 aa10.11□□□□□ -0.79
USP11-204ENST00000377107 NAA38Q9BRA0 125 aaKnown RBP10.11□□□□□ -0.79
USP11-204ENST00000377107 BPESC1Q9GZL8 116 aa10.11□□□□□ -0.79
USP11-204ENST00000377107 CT83Q5H943 113 aa10.11□□□□□ -0.79
USP11-204ENST00000377107 CHCHD1Q96BP2 118 aaKnown RBP10.11□□□□□ -0.79
USP11-204ENST00000377107 CELSR1Q9NYQ6 3014 aa10.11□□□□□ -0.79
USP11-204ENST00000377107 HAX1O00165 279 aa10.11□□□□□ -0.79
USP11-204ENST00000377107 ATP6V0E1O15342 81 aa10.11□□□□□ -0.79
USP11-204ENST00000377107 EGR2P11161 476 aaPredicted RBP10.11□□□□□ -0.79
USP11-204ENST00000377107 SAA4P35542 130 aa10.11□□□□□ -0.79
USP11-204ENST00000377107 NMUP48645 174 aa10.11□□□□□ -0.79
USP11-204ENST00000377107 TM4SF20Q53R12 229 aa10.11□□□□□ -0.79
USP11-204ENST00000377107 ZNF738Q8NE65 137 aa10.11□□□□□ -0.79
USP11-204ENST00000377107 OR4C5Q8NGB2 326 aa10.11□□□□□ -0.79
USP11-204ENST00000377107 DEFB104AQ8WTQ1 72 aa10.11□□□□□ -0.79
USP11-204ENST00000377107 HIF1ANQ9NWT6 349 aa10.11□□□□□ -0.79
USP11-204ENST00000377107 PRAC2D3DTV9 90 aa10.1□□□□□ -0.79
USP11-204ENST00000377107 FER1L6-AS1Q8NA97 138 aa10.1□□□□□ -0.79
USP11-204ENST00000377107 RNF5Q99942 180 aa10.1□□□□□ -0.79
USP11-204ENST00000377107 IGLV11-55A0A075B6I3 123 aa10.1□□□□□ -0.79
USP11-204ENST00000377107 A0A1W2PPR1 153 aa10.1□□□□□ -0.79
USP11-204ENST00000377107 CTSGP08311 255 aa10.1□□□□□ -0.79
USP11-204ENST00000377107 CACNG7P62955 275 aa10.1□□□□□ -0.79
USP11-204ENST00000377107 OR11H6Q8NGC7 330 aa10.1□□□□□ -0.79
USP11-204ENST00000377107 SMIM12Q96EX1 92 aa10.1□□□□□ -0.79
USP11-204ENST00000377107 GFRA4Q9GZZ7 299 aa10.1□□□□□ -0.79
USP11-204ENST00000377107 ZNF80P51504 273 aaPredicted RBP10.1□□□□□ -0.79
USP11-204ENST00000377107 USP9XQ93008 2570 aaPredicted RBP10.09□□□□□ -0.79
USP11-204ENST00000377107 IGHV3-11P01762 117 aa10.09□□□□□ -0.79
USP11-204ENST00000377107 NEU4Q8WWR8 484 aaPredicted RBP10.09□□□□□ -0.79
USP11-204ENST00000377107 IGHV7-81A0A0B4J1V7 117 aa10.09□□□□□ -0.79
USP11-204ENST00000377107 PSG9Q00887 426 aa10.09□□□□□ -0.79
USP11-204ENST00000377107 ORMDL3Q8N138 153 aa10.09□□□□□ -0.79
USP11-204ENST00000377107 PRR25Q96S07 402 aa10.09□□□□□ -0.79
USP11-204ENST00000377107 SETD2Q9BYW2 2564 aaPredicted RBP10.09□□□□□ -0.79
USP11-204ENST00000377107 GATA1P15976 413 aaPredicted RBP10.08□□□□□ -0.8
USP11-204ENST00000377107 GOSR1O95249 250 aa10.08□□□□□ -0.8
USP11-204ENST00000377107 PRSS1P07477 247 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms