RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 IGKV2-40A0A087WW87 121 aaPredicted RBP15.68■□□□□ 0.1
VSX1-202ENST00000376709 ZNF324O75467 553 aaPredicted RBP15.68■□□□□ 0.1
VSX1-202ENST00000376709 IGKV2D-40P01614 121 aaPredicted RBP15.68■□□□□ 0.1
VSX1-202ENST00000376709 COX6B1P14854 86 aa15.68■□□□□ 0.1
VSX1-202ENST00000376709 RAB9AP51151 201 aa15.68■□□□□ 0.1
VSX1-202ENST00000376709 ATP5G2Q06055 141 aa15.67■□□□□ 0.1
VSX1-202ENST00000376709 NDUFAF3Q9BU61 184 aa15.67■□□□□ 0.1
VSX1-202ENST00000376709 KIR2DL5BA0A0G2JN68 375 aa15.66■□□□□ 0.1
VSX1-202ENST00000376709 KIR2DL5BA0A0G2JPC4 375 aa15.66■□□□□ 0.1
VSX1-202ENST00000376709 CHEK1O14757 476 aa15.66■□□□□ 0.1
VSX1-202ENST00000376709 BUB3O43684 328 aa15.66■□□□□ 0.1
VSX1-202ENST00000376709 CRIP1P50238 77 aa15.66■□□□□ 0.1
VSX1-202ENST00000376709 IGFL4Q6B9Z1 124 aa15.66■□□□□ 0.1
VSX1-202ENST00000376709 KIR2DL5AQ8N109 375 aa15.66■□□□□ 0.1
VSX1-202ENST00000376709 NRN1Q9NPD7 142 aa15.66■□□□□ 0.1
VSX1-202ENST00000376709 KLF5Q13887 457 aaPredicted RBP15.66■□□□□ 0.1
VSX1-202ENST00000376709 LY6EQ16553 131 aa15.66■□□□□ 0.1
VSX1-202ENST00000376709 C1orf194Q5T5A4 169 aa15.66■□□□□ 0.1
VSX1-202ENST00000376709 ARL6IP6Q8N6S5 226 aa15.66■□□□□ 0.1
VSX1-202ENST00000376709 FOXA3P55318 350 aaPredicted RBP15.65■□□□□ 0.1
VSX1-202ENST00000376709 KRTDAPP60985 99 aa15.65■□□□□ 0.1
VSX1-202ENST00000376709 TDRG1Q3Y452 100 aa15.65■□□□□ 0.1
VSX1-202ENST00000376709 FAM19A2Q8N3H0 131 aa15.65■□□□□ 0.1
VSX1-202ENST00000376709 NTF3P20783 257 aa15.65■□□□□ 0.1
VSX1-202ENST00000376709 RELQ04864 619 aaPredicted RBP15.65■□□□□ 0.1
VSX1-202ENST00000376709 LURAP1LQ8IV03 231 aa15.65■□□□□ 0.1
VSX1-202ENST00000376709 IGHV3-66A0A0C4DH42 116 aa15.64■□□□□ 0.09
VSX1-202ENST00000376709 A0A1B0GUT8 65 aa15.64■□□□□ 0.09
VSX1-202ENST00000376709 H3BUX3 64 aa15.64■□□□□ 0.09
VSX1-202ENST00000376709 HAX1O00165 279 aa15.64■□□□□ 0.09
VSX1-202ENST00000376709 SAPCD1Q5SSQ6 148 aa15.64■□□□□ 0.09
VSX1-202ENST00000376709 TEX43Q6ZNM6 134 aa15.64■□□□□ 0.09
VSX1-202ENST00000376709 HIF1ANQ9NWT6 349 aa15.64■□□□□ 0.09
VSX1-202ENST00000376709 FAM223BA6NKX1 122 aa15.63■□□□□ 0.09
VSX1-202ENST00000376709 HSBP1O75506 76 aa15.63■□□□□ 0.09
VSX1-202ENST00000376709 TRGV3P03979 118 aa15.63■□□□□ 0.09
VSX1-202ENST00000376709 HLA-DMBP28068 263 aa15.63■□□□□ 0.09
VSX1-202ENST00000376709 FAM223AQ8IWN6 122 aa15.63■□□□□ 0.09
VSX1-202ENST00000376709 METTL26Q96S19 204 aa15.63■□□□□ 0.09
VSX1-202ENST00000376709 POLQO75417 2590 aa15.63■□□□□ 0.09
VSX1-202ENST00000376709 IGHV3OR16-13A0A075B7E8 117 aa15.63■□□□□ 0.09
VSX1-202ENST00000376709 IGHV3-74A0A0B4J1X5 117 aa15.63■□□□□ 0.09
VSX1-202ENST00000376709 CLPSL1A2RUU4 121 aa15.63■□□□□ 0.09
VSX1-202ENST00000376709 FBLL1A6NHQ2 334 aaKnown RBP15.63■□□□□ 0.09
VSX1-202ENST00000376709 B4DSR2 109 aa15.63■□□□□ 0.09
VSX1-202ENST00000376709 APOHP02749 345 aaPredicted RBP15.63■□□□□ 0.09
VSX1-202ENST00000376709 C19orf54Q5BKX5 351 aa15.63■□□□□ 0.09
VSX1-202ENST00000376709 RNASEKQ6P5S7 137 aaKnown RBP15.63■□□□□ 0.09
VSX1-202ENST00000376709 TPPP3Q9BW30 176 aa15.63■□□□□ 0.09
VSX1-202ENST00000376709 CRIP2P52943 208 aaPredicted RBP15.62■□□□□ 0.09
VSX1-202ENST00000376709 FAM162BQ5T6X4 162 aa15.62■□□□□ 0.09
VSX1-202ENST00000376709 NIT1Q86X76 327 aa15.62■□□□□ 0.09
VSX1-202ENST00000376709 Q8TAT8 98 aa15.62■□□□□ 0.09
VSX1-202ENST00000376709 PRR25Q96S07 402 aa15.62■□□□□ 0.09
VSX1-202ENST00000376709 IGHG4P01861 327 aa15.62■□□□□ 0.09
VSX1-202ENST00000376709 ARMS2P0C7Q2 107 aa15.62■□□□□ 0.09
VSX1-202ENST00000376709 LCN12Q6JVE5 192 aa15.62■□□□□ 0.09
VSX1-202ENST00000376709 VGLL1Q99990 258 aa15.62■□□□□ 0.09
VSX1-202ENST00000376709 ANKRD17O75179 2603 aaKnown RBP15.61■□□□□ 0.09
VSX1-202ENST00000376709 A0A087X0K7 114 aa15.61■□□□□ 0.09
VSX1-202ENST00000376709 ZNF207O43670 478 aaKnown RBP15.61■□□□□ 0.09
VSX1-202ENST00000376709 DSCR9P59020 149 aa15.61■□□□□ 0.09
VSX1-202ENST00000376709 Q6AWC8 147 aa15.61■□□□□ 0.09
VSX1-202ENST00000376709 Q8N976 141 aa15.61■□□□□ 0.09
VSX1-202ENST00000376709 IGHV3-49A0A0A0MS15 119 aa15.6■□□□□ 0.09
VSX1-202ENST00000376709 SH2D1AO60880 128 aa15.6■□□□□ 0.09
VSX1-202ENST00000376709 RIGQ13278 110 aa15.6■□□□□ 0.09
VSX1-202ENST00000376709 BORCS7Q96B45 105 aa15.6■□□□□ 0.09
VSX1-202ENST00000376709 PAM16Q9Y3D7 125 aa15.6■□□□□ 0.09
VSX1-202ENST00000376709 LOC102724200A0A096LPH7 203 aaPredicted RBP15.6■□□□□ 0.09
VSX1-202ENST00000376709 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.6■□□□□ 0.09
VSX1-202ENST00000376709 TMEM189A5PLL7 270 aa15.6■□□□□ 0.09
VSX1-202ENST00000376709 IGF1P05019 195 aa15.6■□□□□ 0.09
VSX1-202ENST00000376709 TMSB15BA0A087X1C1 80 aa15.59■□□□□ 0.09
VSX1-202ENST00000376709 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.59■□□□□ 0.09
VSX1-202ENST00000376709 ATP6V0BQ99437 205 aa15.59■□□□□ 0.09
VSX1-202ENST00000376709 SLC50A1Q9BRV3 221 aa15.59■□□□□ 0.09
VSX1-202ENST00000376709 A6NDX4 124 aa15.59■□□□□ 0.09
VSX1-202ENST00000376709 M0QZK8 103 aa15.59■□□□□ 0.09
VSX1-202ENST00000376709 COX8CQ7Z4L0 72 aa15.59■□□□□ 0.09
VSX1-202ENST00000376709 RNF182Q8N6D2 247 aa15.59■□□□□ 0.09
VSX1-202ENST00000376709 VAMP8Q9BV40 100 aa15.59■□□□□ 0.09
VSX1-202ENST00000376709 M0R2Z0 102 aa15.58■□□□□ 0.08
VSX1-202ENST00000376709 ARL3P36405 182 aa15.58■□□□□ 0.08
VSX1-202ENST00000376709 NDFIP1Q9BT67 221 aa15.58■□□□□ 0.08
VSX1-202ENST00000376709 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.58■□□□□ 0.08
VSX1-202ENST00000376709 A0A1B0GV90 55 aa15.58■□□□□ 0.08
VSX1-202ENST00000376709 A0A1B0GW15 77 aa15.58■□□□□ 0.08
VSX1-202ENST00000376709 IGHG2P01859 326 aa15.58■□□□□ 0.08
VSX1-202ENST00000376709 C3orf79P0CE67 100 aa15.58■□□□□ 0.08
VSX1-202ENST00000376709 EREGO14944 169 aa15.57■□□□□ 0.08
VSX1-202ENST00000376709 AVPP01185 164 aa15.57■□□□□ 0.08
VSX1-202ENST00000376709 SLC25A16P16260 332 aa15.56■□□□□ 0.08
VSX1-202ENST00000376709 GATA3P23771 443 aa15.56■□□□□ 0.08
VSX1-202ENST00000376709 BMI1P35226 326 aa15.56■□□□□ 0.08
VSX1-202ENST00000376709 M0QZ24 198 aa15.56■□□□□ 0.08
VSX1-202ENST00000376709 KRTAP10-9P60411 292 aa15.56■□□□□ 0.08
VSX1-202ENST00000376709 BLCAPP62952 87 aa15.56■□□□□ 0.08
VSX1-202ENST00000376709 URB1-AS1Q96HZ7 61 aa15.56■□□□□ 0.08
VSX1-202ENST00000376709 C20orf144Q9BQM9 153 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms