RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 PSG8Q9UQ74 426 aa9.25□□□□□ -0.93
DDR1-227ENST00000376570 V9GYV3 84 aa9.25□□□□□ -0.93
DDR1-227ENST00000376570 TYMSP04818 313 aa9.25□□□□□ -0.93
DDR1-227ENST00000376570 ARMS2P0C7Q2 107 aa9.25□□□□□ -0.93
DDR1-227ENST00000376570 AARDQ4LEZ3 155 aa9.25□□□□□ -0.93
DDR1-227ENST00000376570 FAM71F2Q6NXP2 309 aa9.25□□□□□ -0.93
DDR1-227ENST00000376570 NIT1Q86X76 327 aa9.25□□□□□ -0.93
DDR1-227ENST00000376570 TSPOP30536 169 aa9.25□□□□□ -0.93
DDR1-227ENST00000376570 CKS2P33552 79 aa9.25□□□□□ -0.93
DDR1-227ENST00000376570 FAM74A4Q5TZK3 123 aa9.25□□□□□ -0.93
DDR1-227ENST00000376570 AMMECR1LQ6DCA0 310 aa9.25□□□□□ -0.93
DDR1-227ENST00000376570 SLC25A34Q6PIV7 304 aa9.25□□□□□ -0.93
DDR1-227ENST00000376570 COA6Q5JTJ3 125 aaKnown RBP9.24□□□□□ -0.93
DDR1-227ENST00000376570 SPANXN1Q5VSR9 72 aa9.24□□□□□ -0.93
DDR1-227ENST00000376570 C8orf46Q8TAG6 207 aa9.24□□□□□ -0.93
DDR1-227ENST00000376570 RNASE8Q8TDE3 154 aaKnown RBP9.24□□□□□ -0.93
DDR1-227ENST00000376570 A0A1B0GWJ7 208 aa9.24□□□□□ -0.93
DDR1-227ENST00000376570 IGLV2-23P01705 113 aa9.24□□□□□ -0.93
DDR1-227ENST00000376570 APOHP02749 345 aaPredicted RBP9.24□□□□□ -0.93
DDR1-227ENST00000376570 FXYD5Q96DB9 178 aa9.24□□□□□ -0.93
DDR1-227ENST00000376570 TXNDC17Q9BRA2 123 aa9.24□□□□□ -0.93
DDR1-227ENST00000376570 IGLC2P0DOY2 106 aa9.24□□□□□ -0.93
DDR1-227ENST00000376570 IGLC3P0DOY3 106 aa9.24□□□□□ -0.93
DDR1-227ENST00000376570 HBBP68871 147 aa9.24□□□□□ -0.93
DDR1-227ENST00000376570 LINC00322Q6ZN03 302 aaPredicted RBP9.24□□□□□ -0.93
DDR1-227ENST00000376570 GNB1LQ9BYB4 327 aa9.24□□□□□ -0.93
DDR1-227ENST00000376570 ZANQ9Y493 2812 aa9.24□□□□□ -0.93
DDR1-227ENST00000376570 TMEM136Q6ZRR5 245 aa9.23□□□□□ -0.93
DDR1-227ENST00000376570 LINC00173Q6ZV60 143 aa9.23□□□□□ -0.93
DDR1-227ENST00000376570 KIR2DL5BA0A0G2JN68 375 aa9.23□□□□□ -0.93
DDR1-227ENST00000376570 KIR2DL5BA0A0G2JPC4 375 aa9.23□□□□□ -0.93
DDR1-227ENST00000376570 SFTPCP11686 197 aa9.23□□□□□ -0.93
DDR1-227ENST00000376570 IGLL1P15814 213 aa9.23□□□□□ -0.93
DDR1-227ENST00000376570 SCGB2A2Q13296 93 aa9.23□□□□□ -0.93
DDR1-227ENST00000376570 KIR2DL5AQ8N109 375 aa9.23□□□□□ -0.93
DDR1-227ENST00000376570 DUX3Q96PT4 197 aa9.23□□□□□ -0.93
DDR1-227ENST00000376570 FAM181BA6NEQ2 426 aa9.23□□□□□ -0.93
DDR1-227ENST00000376570 FAM90A9PA6NNJ1 464 aa9.23□□□□□ -0.93
DDR1-227ENST00000376570 CCL25O15444 150 aa9.23□□□□□ -0.93
DDR1-227ENST00000376570 IGKV1-17P01599 117 aa9.23□□□□□ -0.93
DDR1-227ENST00000376570 IGLC1P0CG04 106 aa9.23□□□□□ -0.93
DDR1-227ENST00000376570 C20orf144Q9BQM9 153 aa9.23□□□□□ -0.93
DDR1-227ENST00000376570 TP53TG3Q9ULZ0 132 aa9.23□□□□□ -0.93
DDR1-227ENST00000376570 IZUMO1RA6ND01 250 aa9.22□□□□□ -0.93
DDR1-227ENST00000376570 C9JCJ5 164 aa9.22□□□□□ -0.93
DDR1-227ENST00000376570 F6UB75 175 aa9.22□□□□□ -0.93
DDR1-227ENST00000376570 SMIM15Q7Z3B0 74 aa9.22□□□□□ -0.93
DDR1-227ENST00000376570 AMN1Q8IY45 258 aa9.22□□□□□ -0.93
DDR1-227ENST00000376570 C18orf32Q8TCD1 76 aa9.22□□□□□ -0.93
DDR1-227ENST00000376570 FAM167A-AS1Q96KT0 104 aa9.22□□□□□ -0.93
DDR1-227ENST00000376570 TRAV9-2A0A087WT02 112 aa9.22□□□□□ -0.93
DDR1-227ENST00000376570 VWC2Q2TAL6 325 aa9.22□□□□□ -0.93
DDR1-227ENST00000376570 NEU4Q8WWR8 484 aaPredicted RBP9.22□□□□□ -0.93
DDR1-227ENST00000376570 LINC00477Q96M19 166 aa9.22□□□□□ -0.93
DDR1-227ENST00000376570 GAGE10A6NGK3 116 aa9.22□□□□□ -0.93
DDR1-227ENST00000376570 YPEL3P61236 119 aaPredicted RBP9.22□□□□□ -0.93
DDR1-227ENST00000376570 BLCAPP62952 87 aa9.22□□□□□ -0.93
DDR1-227ENST00000376570 ATP5G2Q06055 141 aa9.22□□□□□ -0.93
DDR1-227ENST00000376570 GRAMD2BQ96HH9 432 aa9.22□□□□□ -0.93
DDR1-227ENST00000376570 VGLL1Q99990 258 aa9.22□□□□□ -0.93
DDR1-227ENST00000376570 IGHV4-61A0A0C4DH41 118 aa9.21□□□□□ -0.93
DDR1-227ENST00000376570 PRTN3P24158 256 aa9.21□□□□□ -0.93
DDR1-227ENST00000376570 METTL26Q96S19 204 aa9.21□□□□□ -0.93
DDR1-227ENST00000376570 RAI1Q7Z5J4 1906 aaPredicted RBP9.21□□□□□ -0.93
DDR1-227ENST00000376570 IGKV1D-37A0A075B6S9 117 aa9.21□□□□□ -0.94
DDR1-227ENST00000376570 IGHV4-38-2P0DP08 117 aa9.21□□□□□ -0.94
DDR1-227ENST00000376570 RIGQ13278 110 aa9.21□□□□□ -0.94
DDR1-227ENST00000376570 TMEM78Q5T7P6 136 aa9.21□□□□□ -0.94
DDR1-227ENST00000376570 LYZL1Q6UWQ5 148 aa9.21□□□□□ -0.94
DDR1-227ENST00000376570 TEX43Q6ZNM6 134 aa9.21□□□□□ -0.94
DDR1-227ENST00000376570 OSTCQ9NRP0 149 aa9.21□□□□□ -0.94
DDR1-227ENST00000376570 RPL7P18124 248 aaKnown RBP9.21□□□□□ -0.94
DDR1-227ENST00000376570 EFNA4P52798 201 aa9.21□□□□□ -0.94
DDR1-227ENST00000376570 DLX6P56179 175 aa9.21□□□□□ -0.94
DDR1-227ENST00000376570 CENPVQ7Z7K6 275 aaPredicted RBP9.21□□□□□ -0.94
DDR1-227ENST00000376570 PIMREGQ9BSJ6 248 aa9.21□□□□□ -0.94
DDR1-227ENST00000376570 CELSR1Q9NYQ6 3014 aa9.2□□□□□ -0.94
DDR1-227ENST00000376570 PRSS46E5RG02 174 aa9.2□□□□□ -0.94
DDR1-227ENST00000376570 DNLZQ5SXM8 178 aa9.2□□□□□ -0.94
DDR1-227ENST00000376570 S100A7AQ86SG5 101 aa9.2□□□□□ -0.94
DDR1-227ENST00000376570 A0A1B0GUT8 65 aa9.2□□□□□ -0.94
DDR1-227ENST00000376570 SPENQ96T58 3664 aaKnown RBP9.2□□□□□ -0.94
DDR1-227ENST00000376570 TRBV9A0A0B4J1U6 114 aa9.2□□□□□ -0.94
DDR1-227ENST00000376570 RNF223E7ERA6 249 aa9.2□□□□□ -0.94
DDR1-227ENST00000376570 IGLV1-47P01700 117 aa9.2□□□□□ -0.94
DDR1-227ENST00000376570 SFTA2Q6UW10 78 aa9.2□□□□□ -0.94
DDR1-227ENST00000376570 NPFFO15130 113 aa9.19□□□□□ -0.94
DDR1-227ENST00000376570 GCSHP23434 173 aa9.19□□□□□ -0.94
DDR1-227ENST00000376570 C19orf24Q9BVV8 132 aa9.19□□□□□ -0.94
DDR1-227ENST00000376570 BEX4Q9NWD9 120 aaPredicted RBP9.19□□□□□ -0.94
DDR1-227ENST00000376570 MSRB1Q9NZV6 116 aa9.19□□□□□ -0.94
DDR1-227ENST00000376570 EBLN2Q6P2I7 272 aa9.19□□□□□ -0.94
DDR1-227ENST00000376570 IGSF10Q6WRI0 2623 aa9.19□□□□□ -0.94
DDR1-227ENST00000376570 TRAV26-2A0A0B4J265 109 aa9.19□□□□□ -0.94
DDR1-227ENST00000376570 H3BUT2 72 aa9.19□□□□□ -0.94
DDR1-227ENST00000376570 K7EIM0 57 aa9.19□□□□□ -0.94
DDR1-227ENST00000376570 RNASE4P34096 147 aaKnown RBP9.19□□□□□ -0.94
DDR1-227ENST00000376570 TRGV9Q99603 122 aa9.19□□□□□ -0.94
DDR1-227ENST00000376570 AP5S1Q9NUS5 200 aa9.19□□□□□ -0.94
DDR1-227ENST00000376570 D6R8Y8 96 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms