RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 GCHFRP30047 84 aa8.36□□□□□ -1.07
HSPG2-202ENST00000374676 RAB5CP51148 216 aa8.36□□□□□ -1.07
HSPG2-202ENST00000374676 NKX2-5P52952 324 aaPredicted RBP8.36□□□□□ -1.07
HSPG2-202ENST00000374676 DEFB1P60022 68 aa8.36□□□□□ -1.07
HSPG2-202ENST00000374676 GDF5OSQ5U4N7 250 aa8.36□□□□□ -1.07
HSPG2-202ENST00000374676 MORN3Q6PF18 240 aaPredicted RBP8.36□□□□□ -1.07
HSPG2-202ENST00000374676 SSX7Q7RTT5 188 aa8.36□□□□□ -1.07
HSPG2-202ENST00000374676 ZNF738Q8NE65 137 aa8.36□□□□□ -1.07
HSPG2-202ENST00000374676 MBD3L1Q8WWY6 194 aa8.36□□□□□ -1.07
HSPG2-202ENST00000374676 RPUSD4Q96CM3 377 aaKnown RBP8.36□□□□□ -1.07
HSPG2-202ENST00000374676 CSTL1Q9H114 145 aa8.36□□□□□ -1.07
HSPG2-202ENST00000374676 AAMDCQ9H7C9 122 aa8.36□□□□□ -1.07
HSPG2-202ENST00000374676 ZNF705FA8MVS1 300 aaPredicted RBP8.35□□□□□ -1.07
HSPG2-202ENST00000374676 F6UB75 175 aa8.35□□□□□ -1.07
HSPG2-202ENST00000374676 DUSP14O95147 198 aaKnown RBP8.35□□□□□ -1.07
HSPG2-202ENST00000374676 OR8A1Q8NGG7 326 aa8.35□□□□□ -1.07
HSPG2-202ENST00000374676 PHYHIPLQ96FC7 376 aa8.35□□□□□ -1.07
HSPG2-202ENST00000374676 ASCL2Q99929 193 aa8.35□□□□□ -1.07
HSPG2-202ENST00000374676 TM2D3Q9BRN9 247 aa8.35□□□□□ -1.07
HSPG2-202ENST00000374676 TMEM167BQ9NRX6 74 aa8.35□□□□□ -1.07
HSPG2-202ENST00000374676 HUWE1Q7Z6Z7 4374 aaKnown RBP8.34□□□□□ -1.07
HSPG2-202ENST00000374676 MAP1LC3B2A6NCE7 125 aa8.34□□□□□ -1.07
HSPG2-202ENST00000374676 PRAC2D3DTV9 90 aa8.34□□□□□ -1.07
HSPG2-202ENST00000374676 FHITP49789 147 aa8.34□□□□□ -1.07
HSPG2-202ENST00000374676 SULT1A2P50226 295 aa8.34□□□□□ -1.07
HSPG2-202ENST00000374676 RANP62826 216 aaKnown RBP8.34□□□□□ -1.07
HSPG2-202ENST00000374676 ICAM4Q14773 271 aa8.34□□□□□ -1.07
HSPG2-202ENST00000374676 Q6ZWC4 215 aa8.34□□□□□ -1.07
HSPG2-202ENST00000374676 EXOC3-AS1Q8N2X6 119 aa8.34□□□□□ -1.07
HSPG2-202ENST00000374676 ARL6IP6Q8N6S5 226 aa8.34□□□□□ -1.07
HSPG2-202ENST00000374676 MAP1LC3BQ9GZQ8 125 aa8.34□□□□□ -1.07
HSPG2-202ENST00000374676 OTORQ9NRC9 128 aa8.34□□□□□ -1.07
HSPG2-202ENST00000374676 BOLA1Q9Y3E2 137 aa8.34□□□□□ -1.07
HSPG2-202ENST00000374676 M0R3E3 92 aa8.33□□□□□ -1.08
HSPG2-202ENST00000374676 GIG44P09565 113 aaPredicted RBP8.33□□□□□ -1.08
HSPG2-202ENST00000374676 CNN1P51911 297 aaKnown RBP8.33□□□□□ -1.08
HSPG2-202ENST00000374676 NUTF2P61970 127 aaKnown RBP8.33□□□□□ -1.08
HSPG2-202ENST00000374676 OR4B1Q8NGF8 309 aa8.33□□□□□ -1.08
HSPG2-202ENST00000374676 FAM213BQ8TBF2 198 aa8.33□□□□□ -1.08
HSPG2-202ENST00000374676 SPATA25Q9BR10 227 aa8.33□□□□□ -1.08
HSPG2-202ENST00000374676 Q9H3A6 140 aa8.33□□□□□ -1.08
HSPG2-202ENST00000374676 A0A1W2PRE2 83 aa8.32□□□□□ -1.08
HSPG2-202ENST00000374676 PGPA6NDG6 321 aa8.32□□□□□ -1.08
HSPG2-202ENST00000374676 H2AFB1P0C5Y9 115 aa8.32□□□□□ -1.08
HSPG2-202ENST00000374676 CSN1S1P47710 185 aa8.32□□□□□ -1.08
HSPG2-202ENST00000374676 FGF8P55075 233 aaPredicted RBP8.32□□□□□ -1.08
HSPG2-202ENST00000374676 HIST1H1AQ02539 215 aaPredicted RBP8.32□□□□□ -1.08
HSPG2-202ENST00000374676 FAM74A1Q5RGS3 127 aa8.32□□□□□ -1.08
HSPG2-202ENST00000374676 AMTNQ6UX39 209 aa8.32□□□□□ -1.08
HSPG2-202ENST00000374676 OR10J6PQ8NGY7 276 aa8.32□□□□□ -1.08
HSPG2-202ENST00000374676 RXFP4Q8TDU9 374 aa8.32□□□□□ -1.08
HSPG2-202ENST00000374676 SFT2D1Q8WV19 159 aa8.32□□□□□ -1.08
HSPG2-202ENST00000374676 C1QTNF4Q9BXJ3 329 aa8.32□□□□□ -1.08
HSPG2-202ENST00000374676 TMPRSS5Q9H3S3 457 aa8.32□□□□□ -1.08
HSPG2-202ENST00000374676 ZMAT4Q9H898 229 aa8.32□□□□□ -1.08
HSPG2-202ENST00000374676 TP53TG1Q9Y2A0 90 aa8.32□□□□□ -1.08
HSPG2-202ENST00000374676 TRAV1-1A0A0B4J248 108 aa8.31□□□□□ -1.08
HSPG2-202ENST00000374676 NPIPB6E9PJ23 425 aa8.31□□□□□ -1.08
HSPG2-202ENST00000374676 CA1P00915 261 aaPredicted RBP8.31□□□□□ -1.08
HSPG2-202ENST00000374676 IGKV3-20P01619 116 aa8.31□□□□□ -1.08
HSPG2-202ENST00000374676 ZNF705DP0CH99 300 aaPredicted RBP8.31□□□□□ -1.08
HSPG2-202ENST00000374676 ZNF705BP0CI00 300 aaPredicted RBP8.31□□□□□ -1.08
HSPG2-202ENST00000374676 RNF183Q96D59 192 aa8.31□□□□□ -1.08
HSPG2-202ENST00000374676 LINC00477Q96M19 166 aa8.31□□□□□ -1.08
HSPG2-202ENST00000374676 NKX6-2Q9C056 277 aaPredicted RBP8.31□□□□□ -1.08
HSPG2-202ENST00000374676 RBAKDNA6NC62 111 aa8.3□□□□□ -1.08
HSPG2-202ENST00000374676 DIRC3C9JPN6 131 aa8.3□□□□□ -1.08
HSPG2-202ENST00000374676 BOLA2-SMG1P6H3BVE0 249 aa8.3□□□□□ -1.08
HSPG2-202ENST00000374676 AMBPP02760 352 aa8.3□□□□□ -1.08
HSPG2-202ENST00000374676 SLC25A5P05141 298 aaKnown RBP8.3□□□□□ -1.08
HSPG2-202ENST00000374676 C9orf47Q6ZRZ4 202 aa8.3□□□□□ -1.08
HSPG2-202ENST00000374676 IQCF2Q8IXL9 164 aa8.3□□□□□ -1.08
HSPG2-202ENST00000374676 CSNK1G2-AS1Q8NCQ2 148 aa8.3□□□□□ -1.08
HSPG2-202ENST00000374676 RCHY1Q96PM5 261 aa8.3□□□□□ -1.08
HSPG2-202ENST00000374676 ODF3Q96PU9 254 aa8.3□□□□□ -1.08
HSPG2-202ENST00000374676 OVOL2Q9BRP0 275 aa8.3□□□□□ -1.08
HSPG2-202ENST00000374676 AGPAT4-IT1Q9H0P7 198 aa8.3□□□□□ -1.08
HSPG2-202ENST00000374676 ARL2-SNX15V9GYD0 113 aa8.3□□□□□ -1.08
HSPG2-202ENST00000374676 TEX46H3BTG2 121 aa8.29□□□□□ -1.08
HSPG2-202ENST00000374676 SPRY2O43597 315 aa8.29□□□□□ -1.08
HSPG2-202ENST00000374676 PPT1P50897 306 aa8.29□□□□□ -1.08
HSPG2-202ENST00000374676 SUMO1P63165 101 aaKnown RBP8.29□□□□□ -1.08
HSPG2-202ENST00000374676 DEFB135Q30KP9 77 aa8.29□□□□□ -1.08
HSPG2-202ENST00000374676 ALKAL2Q6UX46 152 aa8.29□□□□□ -1.08
HSPG2-202ENST00000374676 C5orf17Q8NAS9 161 aa8.29□□□□□ -1.08
HSPG2-202ENST00000374676 CMTM2Q8TAZ6 248 aa8.29□□□□□ -1.08
HSPG2-202ENST00000374676 SLC35B3Q9H1N7 401 aa8.29□□□□□ -1.08
HSPG2-202ENST00000374676 PPP1R14DQ9NXH3 145 aa8.29□□□□□ -1.08
HSPG2-202ENST00000374676 XCL2Q9UBD3 114 aa8.29□□□□□ -1.08
HSPG2-202ENST00000374676 SERTM2A0A1B0GWG4 89 aa8.28□□□□□ -1.08
HSPG2-202ENST00000374676 FAM74A7A6NL05 159 aa8.28□□□□□ -1.08
HSPG2-202ENST00000374676 GGTLC3B5MD39 225 aa8.28□□□□□ -1.08
HSPG2-202ENST00000374676 HBE1P02100 147 aa8.28□□□□□ -1.08
HSPG2-202ENST00000374676 CT45A10P0DMU9 189 aa8.28□□□□□ -1.08
HSPG2-202ENST00000374676 PRB4P10163 310 aaPredicted RBP8.28□□□□□ -1.08
HSPG2-202ENST00000374676 TSPOP30536 169 aa8.28□□□□□ -1.08
HSPG2-202ENST00000374676 BLOC1S1P78537 153 aa8.28□□□□□ -1.08
HSPG2-202ENST00000374676 PMS2P11Q13670 270 aa8.28□□□□□ -1.08
HSPG2-202ENST00000374676 VGLL1Q99990 258 aa8.28□□□□□ -1.08
HSPG2-202ENST00000374676 EPDR1Q9UM22 224 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms