RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 H3BQ15 152 aa9.49□□□□□ -0.89
CXCL12-202ENST00000374426 J3KRW8 73 aa9.49□□□□□ -0.89
CXCL12-202ENST00000374426 GOSR2O14653 212 aa9.49□□□□□ -0.89
CXCL12-202ENST00000374426 CT45A10P0DMU9 189 aa9.49□□□□□ -0.89
CXCL12-202ENST00000374426 IGLC2P0DOY2 106 aa9.49□□□□□ -0.89
CXCL12-202ENST00000374426 OPCMLQ14982 345 aa9.49□□□□□ -0.89
CXCL12-202ENST00000374426 Q6ZRN7 208 aaPredicted RBP9.49□□□□□ -0.89
CXCL12-202ENST00000374426 Q6ZTI0 123 aa9.49□□□□□ -0.89
CXCL12-202ENST00000374426 SAT2Q96F10 170 aaPredicted RBP9.49□□□□□ -0.89
CXCL12-202ENST00000374426 VSIG2Q96IQ7 327 aa9.49□□□□□ -0.89
CXCL12-202ENST00000374426 FLVCR2Q9UPI3 526 aa9.49□□□□□ -0.89
CXCL12-202ENST00000374426 MYCBP2O75592 4640 aa9.49□□□□□ -0.89
CXCL12-202ENST00000374426 A0A096LPF7 62 aa9.48□□□□□ -0.89
CXCL12-202ENST00000374426 TRAV12-3A0A0B4J271 114 aa9.48□□□□□ -0.89
CXCL12-202ENST00000374426 COX7A2P2O60397 106 aa9.48□□□□□ -0.89
CXCL12-202ENST00000374426 TSC22D2O75157 780 aa9.48□□□□□ -0.89
CXCL12-202ENST00000374426 NDUFB6O95139 128 aa9.48□□□□□ -0.89
CXCL12-202ENST00000374426 SCGB1D2O95969 90 aa9.48□□□□□ -0.89
CXCL12-202ENST00000374426 LINC00315P59091 139 aa9.48□□□□□ -0.89
CXCL12-202ENST00000374426 TAS2R30P59541 319 aa9.48□□□□□ -0.89
CXCL12-202ENST00000374426 DAZ2Q13117 558 aaKnown RBP9.48□□□□□ -0.89
CXCL12-202ENST00000374426 C4orf46Q504U0 113 aa9.48□□□□□ -0.89
CXCL12-202ENST00000374426 ZNF431Q8TF32 576 aaPredicted RBP9.48□□□□□ -0.89
CXCL12-202ENST00000374426 ODF3Q96PU9 254 aa9.48□□□□□ -0.89
CXCL12-202ENST00000374426 MGST2Q99735 147 aa9.48□□□□□ -0.89
CXCL12-202ENST00000374426 RCL1Q9Y2P8 373 aaKnown RBP9.48□□□□□ -0.89
CXCL12-202ENST00000374426 PXMP4Q9Y6I8 212 aa9.48□□□□□ -0.89
CXCL12-202ENST00000374426 NPIPB6E9PJ23 425 aa9.47□□□□□ -0.89
CXCL12-202ENST00000374426 OR4E1P0C645 316 aa9.47□□□□□ -0.89
CXCL12-202ENST00000374426 IAH1Q2TAA2 248 aaPredicted RBP9.47□□□□□ -0.89
CXCL12-202ENST00000374426 PYGO2Q9BRQ0 406 aa9.47□□□□□ -0.89
CXCL12-202ENST00000374426 GGACTQ9BVM4 153 aa9.47□□□□□ -0.89
CXCL12-202ENST00000374426 C7orf66A4D0T2 115 aa9.46□□□□□ -0.9
CXCL12-202ENST00000374426 S100A5P33763 92 aa9.46□□□□□ -0.9
CXCL12-202ENST00000374426 LEPP41159 167 aa9.46□□□□□ -0.9
CXCL12-202ENST00000374426 C10orf113Q5VZT2 155 aa9.46□□□□□ -0.9
CXCL12-202ENST00000374426 C11orf72Q8NBR9 251 aa9.46□□□□□ -0.9
CXCL12-202ENST00000374426 C18orf15Q96N68 181 aa9.46□□□□□ -0.9
CXCL12-202ENST00000374426 SRRQ9GZT4 340 aa9.46□□□□□ -0.9
CXCL12-202ENST00000374426 GSN-AS1Q9NRJ2 163 aa9.46□□□□□ -0.9
CXCL12-202ENST00000374426 TRGV2A0A075B6R0 118 aa9.45□□□□□ -0.9
CXCL12-202ENST00000374426 TRAV5A0A0B4J249 113 aa9.45□□□□□ -0.9
CXCL12-202ENST00000374426 EPM2AB3EWF7 344 aa9.45□□□□□ -0.9
CXCL12-202ENST00000374426 MBPP02686 304 aaPredicted RBP9.45□□□□□ -0.9
CXCL12-202ENST00000374426 FUSP35637 526 aaKnown RBP eCLIP9.45□□□□□ -0.9
CXCL12-202ENST00000374426 GSKIPQ9P0R6 139 aa9.45□□□□□ -0.9
CXCL12-202ENST00000374426 VPS13BQ7Z7G8 4022 aa9.45□□□□□ -0.9
CXCL12-202ENST00000374426 SRRM2Q9UQ35 2752 aaKnown RBP9.44□□□□□ -0.9
CXCL12-202ENST00000374426 NAP1L6A6NFF2 107 aa9.44□□□□□ -0.9
CXCL12-202ENST00000374426 CAMLGP49069 296 aa9.44□□□□□ -0.9
CXCL12-202ENST00000374426 BAK1Q16611 211 aa9.44□□□□□ -0.9
CXCL12-202ENST00000374426 GUK1Q16774 197 aa9.44□□□□□ -0.9
CXCL12-202ENST00000374426 DNAJC4Q9NNZ3 241 aa9.44□□□□□ -0.9
CXCL12-202ENST00000374426 TRGV1A0A0A0MS02 117 aa9.43□□□□□ -0.9
CXCL12-202ENST00000374426 C7orf71A4D174 169 aa9.43□□□□□ -0.9
CXCL12-202ENST00000374426 M0R3E3 92 aa9.43□□□□□ -0.9
CXCL12-202ENST00000374426 SIVA1O15304 175 aa9.43□□□□□ -0.9
CXCL12-202ENST00000374426 ZNF324O75467 553 aaPredicted RBP9.43□□□□□ -0.9
CXCL12-202ENST00000374426 SLC25A5P05141 298 aaKnown RBP9.43□□□□□ -0.9
CXCL12-202ENST00000374426 BTCP35070 178 aa9.43□□□□□ -0.9
CXCL12-202ENST00000374426 ERCC8Q13216 396 aa9.43□□□□□ -0.9
CXCL12-202ENST00000374426 MIC13Q5XKP0 118 aa9.43□□□□□ -0.9
CXCL12-202ENST00000374426 NRARPQ7Z6K4 114 aa9.43□□□□□ -0.9
CXCL12-202ENST00000374426 ZNF680Q8NEM1 530 aa9.43□□□□□ -0.9
CXCL12-202ENST00000374426 MITD1Q8WV92 249 aa9.43□□□□□ -0.9
CXCL12-202ENST00000374426 PGPEP1Q9NXJ5 209 aa9.43□□□□□ -0.9
CXCL12-202ENST00000374426 FUT9Q9Y231 359 aa9.43□□□□□ -0.9
CXCL12-202ENST00000374426 FLG2Q5D862 2391 aaPredicted RBP9.43□□□□□ -0.9
CXCL12-202ENST00000374426 KLLNB2CW77 178 aa9.42□□□□□ -0.9
CXCL12-202ENST00000374426 ZNF253O75346 499 aa9.42□□□□□ -0.9
CXCL12-202ENST00000374426 NXPH4O95158 308 aa9.42□□□□□ -0.9
CXCL12-202ENST00000374426 XGP55808 180 aa9.42□□□□□ -0.9
CXCL12-202ENST00000374426 CD300CQ08708 224 aa9.42□□□□□ -0.9
CXCL12-202ENST00000374426 ANXA2RQ3ZCQ2 193 aa9.42□□□□□ -0.9
CXCL12-202ENST00000374426 SPANXN2Q5MJ10 180 aa9.42□□□□□ -0.9
CXCL12-202ENST00000374426 Q6ZRG5 221 aa9.42□□□□□ -0.9
CXCL12-202ENST00000374426 MRPL53Q96EL3 112 aaKnown RBP9.42□□□□□ -0.9
CXCL12-202ENST00000374426 FAM19A4Q96LR4 140 aa9.42□□□□□ -0.9
CXCL12-202ENST00000374426 LINC00467Q9BRT7 94 aa9.42□□□□□ -0.9
CXCL12-202ENST00000374426 KLF12Q9Y4X4 402 aa9.42□□□□□ -0.9
CXCL12-202ENST00000374426 TNFRSF18Q9Y5U5 241 aa9.42□□□□□ -0.9
CXCL12-202ENST00000374426 TRBV19A0A075B6N1 114 aa9.41□□□□□ -0.9
CXCL12-202ENST00000374426 SPINK4O60575 86 aa9.41□□□□□ -0.9
CXCL12-202ENST00000374426 NDUFB4O95168 129 aa9.41□□□□□ -0.9
CXCL12-202ENST00000374426 INPP1P49441 399 aa9.41□□□□□ -0.9
CXCL12-202ENST00000374426 BTN1A1Q13410 526 aa9.41□□□□□ -0.9
CXCL12-202ENST00000374426 RAB31Q13636 194 aa9.41□□□□□ -0.9
CXCL12-202ENST00000374426 TRIQKQ629K1 86 aa9.41□□□□□ -0.9
CXCL12-202ENST00000374426 LYPD1Q8N2G4 141 aa9.41□□□□□ -0.9
CXCL12-202ENST00000374426 EIF4E3Q8N5X7 224 aaKnown RBP9.41□□□□□ -0.9
CXCL12-202ENST00000374426 WDR83OSQ9Y284 106 aa9.41□□□□□ -0.9
CXCL12-202ENST00000374426 CCSO14618 274 aa9.4□□□□□ -0.9
CXCL12-202ENST00000374426 PAX4O43316 350 aa9.4□□□□□ -0.9
CXCL12-202ENST00000374426 CST7O76096 145 aa9.4□□□□□ -0.9
CXCL12-202ENST00000374426 TCL1AP56279 114 aa9.4□□□□□ -0.9
CXCL12-202ENST00000374426 ERVFC1-1P60608 527 aa9.4□□□□□ -0.9
CXCL12-202ENST00000374426 CDPF1Q6NVV7 123 aa9.4□□□□□ -0.9
CXCL12-202ENST00000374426 OR1L4Q8NGR5 311 aa9.4□□□□□ -0.9
CXCL12-202ENST00000374426 ST6GAL2Q96JF0 529 aa9.4□□□□□ -0.9
CXCL12-202ENST00000374426 PFDN5Q99471 154 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms