RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 COX8AP10176 69 aa13.91□□□□□ -0.18
PTPRU-202ENST00000373779 RRN3P1Q2M238 152 aa13.91□□□□□ -0.18
PTPRU-202ENST00000373779 DPH3P1Q9H4G8 78 aa13.91□□□□□ -0.18
PTPRU-202ENST00000373779 LHBP01229 141 aa13.91□□□□□ -0.18
PTPRU-202ENST00000373779 SUMO2P61956 95 aaKnown RBP13.91□□□□□ -0.18
PTPRU-202ENST00000373779 TMEM219Q86XT9 240 aa13.91□□□□□ -0.18
PTPRU-202ENST00000373779 PKDREJQ9NTG1 2253 aa13.91□□□□□ -0.18
PTPRU-202ENST00000373779 ESDP10768 282 aa13.91□□□□□ -0.18
PTPRU-202ENST00000373779 TDRG1Q3Y452 100 aa13.91□□□□□ -0.18
PTPRU-202ENST00000373779 MRPL51Q4U2R6 128 aaKnown RBP13.9□□□□□ -0.18
PTPRU-202ENST00000373779 OCIAD2Q56VL3 154 aa13.9□□□□□ -0.18
PTPRU-202ENST00000373779 COX6B1P14854 86 aa13.9□□□□□ -0.18
PTPRU-202ENST00000373779 LINC00477Q96M19 166 aa13.9□□□□□ -0.18
PTPRU-202ENST00000373779 TRAV40A0A0B4J280 105 aa13.9□□□□□ -0.18
PTPRU-202ENST00000373779 PSMB11A5LHX3 300 aa13.9□□□□□ -0.18
PTPRU-202ENST00000373779 H3BRM9 83 aa13.9□□□□□ -0.18
PTPRU-202ENST00000373779 ZNF295-AS1Q8N0V1 137 aa13.89□□□□□ -0.19
PTPRU-202ENST00000373779 NDUFB8O95169 186 aa13.89□□□□□ -0.19
PTPRU-202ENST00000373779 SRD5A1P18405 259 aa13.89□□□□□ -0.19
PTPRU-202ENST00000373779 IGF2BP2-AS1Q96M15 143 aa13.89□□□□□ -0.19
PTPRU-202ENST00000373779 SIGLEC8Q9NYZ4 499 aa13.89□□□□□ -0.19
PTPRU-202ENST00000373779 IGLC7A0M8Q6 106 aa13.88□□□□□ -0.19
PTPRU-202ENST00000373779 LGALS9BQ3B8N2 356 aa13.88□□□□□ -0.19
PTPRU-202ENST00000373779 LGALS9CQ6DKI2 356 aa13.88□□□□□ -0.19
PTPRU-202ENST00000373779 PCDH15Q96QU1 1955 aa13.88□□□□□ -0.19
PTPRU-202ENST00000373779 NUP210LQ5VU65 1888 aa13.88□□□□□ -0.19
PTPRU-202ENST00000373779 EFNA4P52798 201 aa13.88□□□□□ -0.19
PTPRU-202ENST00000373779 C8orf31Q8N9H6 132 aa13.88□□□□□ -0.19
PTPRU-202ENST00000373779 WFDC12Q8WWY7 111 aa13.88□□□□□ -0.19
PTPRU-202ENST00000373779 PRR25Q96S07 402 aa13.88□□□□□ -0.19
PTPRU-202ENST00000373779 YPEL4Q96NS1 127 aa13.88□□□□□ -0.19
PTPRU-202ENST00000373779 POLEQ07864 2286 aa13.88□□□□□ -0.19
PTPRU-202ENST00000373779 P0C879 139 aa13.88□□□□□ -0.19
PTPRU-202ENST00000373779 BVES-AS1Q5T3Y7 98 aa13.88□□□□□ -0.19
PTPRU-202ENST00000373779 C14orf178Q8N769 122 aaPredicted RBP13.88□□□□□ -0.19
PTPRU-202ENST00000373779 TRAV2A0A0B4J234 112 aa13.87□□□□□ -0.19
PTPRU-202ENST00000373779 RNF182Q8N6D2 247 aa13.87□□□□□ -0.19
PTPRU-202ENST00000373779 MORN5Q5VZ52 161 aa13.87□□□□□ -0.19
PTPRU-202ENST00000373779 C9orf118A6NHY6 69 aa13.87□□□□□ -0.19
PTPRU-202ENST00000373779 DUSP14O95147 198 aaKnown RBP13.87□□□□□ -0.19
PTPRU-202ENST00000373779 EMP1P54849 157 aa13.87□□□□□ -0.19
PTPRU-202ENST00000373779 K7EM74 188 aa13.86□□□□□ -0.19
PTPRU-202ENST00000373779 TMEM8BA6NDV4 472 aa13.86□□□□□ -0.19
PTPRU-202ENST00000373779 TRAV8-2A0A0B4J237 113 aa13.86□□□□□ -0.19
PTPRU-202ENST00000373779 KAAG1Q9UBP8 84 aa13.86□□□□□ -0.19
PTPRU-202ENST00000373779 CADP27708 2225 aa13.85□□□□□ -0.19
PTPRU-202ENST00000373779 A8MWV9 139 aa13.85□□□□□ -0.19
PTPRU-202ENST00000373779 IL17RELQ6ZVW7 336 aa13.85□□□□□ -0.19
PTPRU-202ENST00000373779 Q8N8P6 123 aa13.85□□□□□ -0.19
PTPRU-202ENST00000373779 FAM110DQ8TAY7 271 aaPredicted RBP13.85□□□□□ -0.19
PTPRU-202ENST00000373779 CSTL1Q9H114 145 aa13.85□□□□□ -0.19
PTPRU-202ENST00000373779 PRSS57Q6UWY2 283 aa13.85□□□□□ -0.19
PTPRU-202ENST00000373779 LINC01587Q99440 93 aa13.84□□□□□ -0.19
PTPRU-202ENST00000373779 FAM223BA6NKX1 122 aa13.84□□□□□ -0.19
PTPRU-202ENST00000373779 CD28P10747 220 aa13.84□□□□□ -0.19
PTPRU-202ENST00000373779 FAM223AQ8IWN6 122 aa13.84□□□□□ -0.19
PTPRU-202ENST00000373779 ITLN2Q8WWU7 325 aaPredicted RBP13.84□□□□□ -0.19
PTPRU-202ENST00000373779 SPTBN2O15020 2390 aa13.84□□□□□ -0.19
PTPRU-202ENST00000373779 TRGV11A0A075B6L2 103 aa13.84□□□□□ -0.19
PTPRU-202ENST00000373779 PATE2Q6UY27 113 aa13.84□□□□□ -0.19
PTPRU-202ENST00000373779 NPYP01303 97 aa13.84□□□□□ -0.19
PTPRU-202ENST00000373779 IGHV4-39P01824 125 aa13.84□□□□□ -0.19
PTPRU-202ENST00000373779 PLA2G5P39877 138 aa13.84□□□□□ -0.19
PTPRU-202ENST00000373779 ADAMTS9Q9P2N4 1935 aa13.83□□□□□ -0.19
PTPRU-202ENST00000373779 IGKV3OR2-268A0A0C4DH90 116 aa13.83□□□□□ -0.19
PTPRU-202ENST00000373779 SAA4P35542 130 aa13.83□□□□□ -0.19
PTPRU-202ENST00000373779 PAX2Q02962 417 aa13.83□□□□□ -0.19
PTPRU-202ENST00000373779 FAM167A-AS1Q96KT0 104 aa13.83□□□□□ -0.19
PTPRU-202ENST00000373779 ZNF491Q8N8L2 437 aa13.83□□□□□ -0.2
PTPRU-202ENST00000373779 C17orf77Q96MU5 243 aa13.83□□□□□ -0.2
PTPRU-202ENST00000373779 CTSZQ9UBR2 303 aa13.83□□□□□ -0.2
PTPRU-202ENST00000373779 PRR30Q53SZ7 412 aaPredicted RBP13.83□□□□□ -0.2
PTPRU-202ENST00000373779 IGHV3-64A0A075B6Q5 118 aa13.83□□□□□ -0.2
PTPRU-202ENST00000373779 ATP6V0E1O15342 81 aa13.83□□□□□ -0.2
PTPRU-202ENST00000373779 DEFB104AQ8WTQ1 72 aa13.83□□□□□ -0.2
PTPRU-202ENST00000373779 VCYO14598 125 aa13.82□□□□□ -0.2
PTPRU-202ENST00000373779 ADAMTSL5Q6ZMM2 481 aa13.82□□□□□ -0.2
PTPRU-202ENST00000373779 Q6ZVH6 145 aa13.82□□□□□ -0.2
PTPRU-202ENST00000373779 ZNF747Q9BV97 191 aa13.82□□□□□ -0.2
PTPRU-202ENST00000373779 SPOCK3Q9BQ16 436 aa13.82□□□□□ -0.2
PTPRU-202ENST00000373779 ZNF318Q5VUA4 2279 aa13.82□□□□□ -0.2
PTPRU-202ENST00000373779 GP9P14770 177 aa13.82□□□□□ -0.2
PTPRU-202ENST00000373779 TMEM101Q96IK0 257 aa13.82□□□□□ -0.2
PTPRU-202ENST00000373779 FRMD6-AS1P0C7T7 363 aa13.82□□□□□ -0.2
PTPRU-202ENST00000373779 DLX4Q92988 240 aaPredicted RBP13.82□□□□□ -0.2
PTPRU-202ENST00000373779 IGKV1OR2-108A0A075B7D4 117 aa13.81□□□□□ -0.2
PTPRU-202ENST00000373779 PGPEP1Q9NXJ5 209 aa13.81□□□□□ -0.2
PTPRU-202ENST00000373779 FREM1Q5H8C1 2179 aa13.81□□□□□ -0.2
PTPRU-202ENST00000373779 ERG28Q9UKR5 140 aa13.81□□□□□ -0.2
PTPRU-202ENST00000373779 TMEM262E9PQX1 116 aa13.81□□□□□ -0.2
PTPRU-202ENST00000373779 IGFL2Q6UWQ7 119 aa13.81□□□□□ -0.2
PTPRU-202ENST00000373779 BRD3OSQ6XYD6 125 aa13.81□□□□□ -0.2
PTPRU-202ENST00000373779 SPRY4Q9C004 299 aa13.81□□□□□ -0.2
PTPRU-202ENST00000373779 DKK4Q9UBT3 224 aa13.81□□□□□ -0.2
PTPRU-202ENST00000373779 DNAL4O96015 105 aa13.81□□□□□ -0.2
PTPRU-202ENST00000373779 TSPAN13O95857 204 aa13.8□□□□□ -0.2
PTPRU-202ENST00000373779 USMG5Q96IX5 58 aa13.8□□□□□ -0.2
PTPRU-202ENST00000373779 TRAV12-3A0A0B4J271 114 aa13.8□□□□□ -0.2
PTPRU-202ENST00000373779 K7EP34 96 aa13.8□□□□□ -0.2
PTPRU-202ENST00000373779 BRWD1-AS2P59051 145 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms