RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 J3QLI3 93 aa9.27□□□□□ -0.93
VCL-202ENST00000372755 CFHR2P36980 270 aa9.27□□□□□ -0.93
VCL-202ENST00000372755 RNF144BQ7Z419 303 aa9.27□□□□□ -0.93
VCL-202ENST00000372755 KLF5Q13887 457 aaPredicted RBP9.27□□□□□ -0.93
VCL-202ENST00000372755 OR11H6Q8NGC7 330 aa9.27□□□□□ -0.93
VCL-202ENST00000372755 GATA4P43694 442 aa9.27□□□□□ -0.93
VCL-202ENST00000372755 PYY3Q5JQD4 70 aa9.27□□□□□ -0.93
VCL-202ENST00000372755 C9orf153Q5TBE3 101 aa9.27□□□□□ -0.93
VCL-202ENST00000372755 ZNF581Q9P0T4 197 aa9.26□□□□□ -0.93
VCL-202ENST00000372755 RALGAPA2Q2PPJ7 1873 aa9.26□□□□□ -0.93
VCL-202ENST00000372755 GAGE7O76087 117 aa9.26□□□□□ -0.93
VCL-202ENST00000372755 GAGE12FP0CL80 117 aa9.26□□□□□ -0.93
VCL-202ENST00000372755 GAGE12GP0CL81 117 aa9.26□□□□□ -0.93
VCL-202ENST00000372755 GAGE12IP0CL82 117 aa9.26□□□□□ -0.93
VCL-202ENST00000372755 CDKN1BP46527 198 aa9.26□□□□□ -0.93
VCL-202ENST00000372755 BRCA1P38398 1863 aaKnown RBP9.26□□□□□ -0.93
VCL-202ENST00000372755 SDHAF1A6NFY7 115 aa9.26□□□□□ -0.93
VCL-202ENST00000372755 CGB3P0DN86 165 aa9.26□□□□□ -0.93
VCL-202ENST00000372755 VWC2Q2TAL6 325 aa9.26□□□□□ -0.93
VCL-202ENST00000372755 C8orf86Q6ZUL3 223 aa9.26□□□□□ -0.93
VCL-202ENST00000372755 ZNRF2Q8NHG8 242 aa9.26□□□□□ -0.93
VCL-202ENST00000372755 ARID2Q68CP9 1835 aa9.26□□□□□ -0.93
VCL-202ENST00000372755 LMO1P25800 156 aa9.26□□□□□ -0.93
VCL-202ENST00000372755 PAX9P55771 341 aa9.26□□□□□ -0.93
VCL-202ENST00000372755 COX11Q9Y6N1 276 aa9.26□□□□□ -0.93
VCL-202ENST00000372755 SRSF2Q01130 221 aaKnown RBP9.25□□□□□ -0.93
VCL-202ENST00000372755 C18orf32Q8TCD1 76 aa9.25□□□□□ -0.93
VCL-202ENST00000372755 KLHDC3Q9BQ90 382 aa9.25□□□□□ -0.93
VCL-202ENST00000372755 ZNF664Q8N3J9 261 aa9.25□□□□□ -0.93
VCL-202ENST00000372755 TMEM14CQ9P0S9 112 aa9.25□□□□□ -0.93
VCL-202ENST00000372755 LOC285556D6RIA3 1793 aa9.25□□□□□ -0.93
VCL-202ENST00000372755 GAGE6Q13070 117 aa9.25□□□□□ -0.93
VCL-202ENST00000372755 CRLF1O75462 422 aa9.25□□□□□ -0.93
VCL-202ENST00000372755 Q96MF0 132 aa9.25□□□□□ -0.93
VCL-202ENST00000372755 CITED2Q99967 270 aaPredicted RBP9.25□□□□□ -0.93
VCL-202ENST00000372755 SCRT2Q9NQ03 307 aa9.25□□□□□ -0.93
VCL-202ENST00000372755 TRAV25A0A0B4J276 109 aa9.24□□□□□ -0.93
VCL-202ENST00000372755 H3BRN7 92 aa9.24□□□□□ -0.93
VCL-202ENST00000372755 HLA-DRB4P13762 266 aa9.24□□□□□ -0.93
VCL-202ENST00000372755 HLA-DRB4X5D2U9 266 aa9.24□□□□□ -0.93
VCL-202ENST00000372755 PLXNA1Q9UIW2 1896 aa9.24□□□□□ -0.93
VCL-202ENST00000372755 SCN2AQ99250 2005 aa9.24□□□□□ -0.93
VCL-202ENST00000372755 TCTEX1D4Q5JR98 221 aa9.24□□□□□ -0.93
VCL-202ENST00000372755 TRAV13-2A0A0B4J235 113 aa9.24□□□□□ -0.93
VCL-202ENST00000372755 K7ENP7 123 aa9.24□□□□□ -0.93
VCL-202ENST00000372755 ANXA2RQ3ZCQ2 193 aa9.24□□□□□ -0.93
VCL-202ENST00000372755 DSCR8Q96T75 97 aa9.24□□□□□ -0.93
VCL-202ENST00000372755 C20orf144Q9BQM9 153 aa9.24□□□□□ -0.93
VCL-202ENST00000372755 NDUFA12Q9UI09 145 aa9.24□□□□□ -0.93
VCL-202ENST00000372755 CFPP27918 469 aa9.24□□□□□ -0.93
VCL-202ENST00000372755 MRPL51Q4U2R6 128 aaKnown RBP9.24□□□□□ -0.93
VCL-202ENST00000372755 LINC00311Q8N616 119 aa9.24□□□□□ -0.93
VCL-202ENST00000372755 PPDPFLQ8WWR9 84 aa9.24□□□□□ -0.93
VCL-202ENST00000372755 WDR90Q96KV7 1748 aa9.23□□□□□ -0.93
VCL-202ENST00000372755 HERVK_113P63121 156 aa9.23□□□□□ -0.93
VCL-202ENST00000372755 G3V318 75 aa9.23□□□□□ -0.93
VCL-202ENST00000372755 HAMPP81172 84 aa9.23□□□□□ -0.93
VCL-202ENST00000372755 FAM231DQ6ZW35 169 aa9.23□□□□□ -0.93
VCL-202ENST00000372755 SNRNP200O75643 2136 aaKnown RBP9.23□□□□□ -0.93
VCL-202ENST00000372755 SPTBP11277 2137 aa9.23□□□□□ -0.93
VCL-202ENST00000372755 NXPH4O95158 308 aa9.23□□□□□ -0.93
VCL-202ENST00000372755 CGB7P0DN87 165 aa9.23□□□□□ -0.93
VCL-202ENST00000372755 PRR25Q96S07 402 aa9.23□□□□□ -0.93
VCL-202ENST00000372755 SLAQ13239 276 aa9.23□□□□□ -0.93
VCL-202ENST00000372755 TAL2Q16559 108 aa9.23□□□□□ -0.93
VCL-202ENST00000372755 IGKV1-6A0A0C4DH72 117 aa9.23□□□□□ -0.93
VCL-202ENST00000372755 PRSS29PA6NIE9 313 aa9.23□□□□□ -0.93
VCL-202ENST00000372755 CR1LQ2VPA4 569 aa9.22□□□□□ -0.93
VCL-202ENST00000372755 ZNRD1Q9P1U0 126 aa9.22□□□□□ -0.93
VCL-202ENST00000372755 C9orf118A6NHY6 69 aa9.22□□□□□ -0.93
VCL-202ENST00000372755 POLR3KQ9Y2Y1 108 aaPredicted RBP9.22□□□□□ -0.93
VCL-202ENST00000372755 LGALS9BQ3B8N2 356 aa9.22□□□□□ -0.93
VCL-202ENST00000372755 LGALS9CQ6DKI2 356 aa9.22□□□□□ -0.93
VCL-202ENST00000372755 MDC1Q14676 2089 aaKnown RBP9.22□□□□□ -0.93
VCL-202ENST00000372755 IGHV3-38A0A0C4DH36 116 aa9.22□□□□□ -0.93
VCL-202ENST00000372755 ZNF134P52741 427 aa9.22□□□□□ -0.93
VCL-202ENST00000372755 IGHV1-24A0A0C4DH33 117 aa9.21□□□□□ -0.93
VCL-202ENST00000372755 MYOFQ9NZM1 2061 aa9.21□□□□□ -0.94
VCL-202ENST00000372755 RALGAPA1Q6GYQ0 2036 aa9.21□□□□□ -0.94
VCL-202ENST00000372755 F8W1H4 67 aa9.21□□□□□ -0.94
VCL-202ENST00000372755 LHBP01229 141 aa9.21□□□□□ -0.94
VCL-202ENST00000372755 FGF6P10767 208 aa9.21□□□□□ -0.94
VCL-202ENST00000372755 C17orf58Q2M2W7 97 aa9.21□□□□□ -0.94
VCL-202ENST00000372755 TEX36Q5VZQ5 186 aa9.21□□□□□ -0.94
VCL-202ENST00000372755 SPTA1P02549 2419 aa9.21□□□□□ -0.94
VCL-202ENST00000372755 TRAV12-2A0A075B6T6 113 aa9.21□□□□□ -0.94
VCL-202ENST00000372755 ELANEP08246 267 aa9.21□□□□□ -0.94
VCL-202ENST00000372755 ADCYAP1P18509 176 aa9.21□□□□□ -0.94
VCL-202ENST00000372755 MORN5Q5VZ52 161 aa9.21□□□□□ -0.94
VCL-202ENST00000372755 PYGO2Q9BRQ0 406 aa9.21□□□□□ -0.94
VCL-202ENST00000372755 PKIGQ9Y2B9 76 aa9.21□□□□□ -0.94
VCL-202ENST00000372755 TRAV26-2A0A0B4J265 109 aa9.2□□□□□ -0.94
VCL-202ENST00000372755 SMIM27A0A1W2PRY6 76 aa9.2□□□□□ -0.94
VCL-202ENST00000372755 LOXP28300 417 aaPredicted RBP9.2□□□□□ -0.94
VCL-202ENST00000372755 IGFL3Q6UXB1 125 aa9.2□□□□□ -0.94
VCL-202ENST00000372755 IGHV7-4-1A0A0J9YVY3 117 aa9.2□□□□□ -0.94
VCL-202ENST00000372755 C22orf46C9J442 243 aa9.2□□□□□ -0.94
VCL-202ENST00000372755 H3BUA1 57 aa9.2□□□□□ -0.94
VCL-202ENST00000372755 C20orf78Q9BR46 151 aa9.2□□□□□ -0.94
VCL-202ENST00000372755 A8MWP6 167 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms