RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 ZNF503Q96F45 646 aa8.08□□□□□ -1.12
COL5A1-202ENST00000371820 KCNS1Q96KK3 526 aa8.08□□□□□ -1.12
COL5A1-202ENST00000371820 TMEM68Q96MH6 324 aa8.08□□□□□ -1.12
COL5A1-202ENST00000371820 HSPB9Q9BQS6 159 aa8.08□□□□□ -1.12
COL5A1-202ENST00000371820 SLC25A2Q9BXI2 301 aa8.08□□□□□ -1.12
COL5A1-202ENST00000371820 ZNF355PQ9NSJ1 428 aa8.08□□□□□ -1.12
COL5A1-202ENST00000371820 TMEM14CQ9P0S9 112 aa8.08□□□□□ -1.12
COL5A1-202ENST00000371820 DNAH3Q8TD57 4116 aa8.08□□□□□ -1.12
COL5A1-202ENST00000371820 IGKV1OR2-108A0A075B7D4 117 aa8.07□□□□□ -1.12
COL5A1-202ENST00000371820 GGTLC3B5MD39 225 aa8.07□□□□□ -1.12
COL5A1-202ENST00000371820 OR2J3O76001 311 aa8.07□□□□□ -1.12
COL5A1-202ENST00000371820 IGLV2-8P01709 118 aa8.07□□□□□ -1.12
COL5A1-202ENST00000371820 OR5AL1P0C617 328 aa8.07□□□□□ -1.12
COL5A1-202ENST00000371820 NBEAP1P0C6P0 100 aa8.07□□□□□ -1.12
COL5A1-202ENST00000371820 MMDQ15546 238 aa8.07□□□□□ -1.12
COL5A1-202ENST00000371820 PRSS8Q16651 343 aa8.07□□□□□ -1.12
COL5A1-202ENST00000371820 LINC00305Q7Z4B0 112 aa8.07□□□□□ -1.12
COL5A1-202ENST00000371820 ZNF329Q86UD4 541 aa8.07□□□□□ -1.12
COL5A1-202ENST00000371820 MISP3Q96FF7 219 aa8.07□□□□□ -1.12
COL5A1-202ENST00000371820 ATG101Q9BSB4 218 aa8.07□□□□□ -1.12
COL5A1-202ENST00000371820 ZNF580Q9UK33 172 aa8.07□□□□□ -1.12
COL5A1-202ENST00000371820 SERTM2A0A1B0GWG4 89 aa8.06□□□□□ -1.12
COL5A1-202ENST00000371820 DIRC3C9JPN6 131 aa8.06□□□□□ -1.12
COL5A1-202ENST00000371820 TCAPO15273 167 aa8.06□□□□□ -1.12
COL5A1-202ENST00000371820 ZNF324O75467 553 aaPredicted RBP8.06□□□□□ -1.12
COL5A1-202ENST00000371820 TOMM40O96008 361 aa8.06□□□□□ -1.12
COL5A1-202ENST00000371820 IGLV2-23P01705 113 aa8.06□□□□□ -1.12
COL5A1-202ENST00000371820 SLC25A5P05141 298 aaKnown RBP8.06□□□□□ -1.12
COL5A1-202ENST00000371820 MYCNOSP40205 109 aa8.06□□□□□ -1.12
COL5A1-202ENST00000371820 AMTP48728 403 aa8.06□□□□□ -1.12
COL5A1-202ENST00000371820 OR5I1Q13606 314 aa8.06□□□□□ -1.12
COL5A1-202ENST00000371820 OXLD1Q5BKU9 147 aa8.06□□□□□ -1.12
COL5A1-202ENST00000371820 TCTEX1D4Q5JR98 221 aa8.06□□□□□ -1.12
COL5A1-202ENST00000371820 ZNF705AQ6ZN79 300 aaPredicted RBP8.06□□□□□ -1.12
COL5A1-202ENST00000371820 WFDC9Q8NEX5 89 aa8.06□□□□□ -1.12
COL5A1-202ENST00000371820 NUDT10Q8NFP7 164 aa8.06□□□□□ -1.12
COL5A1-202ENST00000371820 OR10W1Q8NGF6 305 aa8.06□□□□□ -1.12
COL5A1-202ENST00000371820 NUDT11Q96G61 164 aa8.06□□□□□ -1.12
COL5A1-202ENST00000371820 GNB4Q9HAV0 340 aa8.06□□□□□ -1.12
COL5A1-202ENST00000371820 NRN1Q9NPD7 142 aa8.06□□□□□ -1.12
COL5A1-202ENST00000371820 OTORQ9NRC9 128 aa8.06□□□□□ -1.12
COL5A1-202ENST00000371820 UQCR10Q9UDW1 63 aa8.06□□□□□ -1.12
COL5A1-202ENST00000371820 A0A1B0GV90 55 aa8.05□□□□□ -1.12
COL5A1-202ENST00000371820 PGPA6NDG6 321 aa8.05□□□□□ -1.12
COL5A1-202ENST00000371820 NBR2O15453 112 aa8.05□□□□□ -1.12
COL5A1-202ENST00000371820 HSBP1O75506 76 aa8.05□□□□□ -1.12
COL5A1-202ENST00000371820 CRYGBP07316 175 aa8.05□□□□□ -1.12
COL5A1-202ENST00000371820 ELANEP08246 267 aa8.05□□□□□ -1.12
COL5A1-202ENST00000371820 WT1-ASQ06250 92 aa8.05□□□□□ -1.12
COL5A1-202ENST00000371820 C10orf99Q6UWK7 81 aa8.05□□□□□ -1.12
COL5A1-202ENST00000371820 MRAPQ8TCY5 172 aa8.05□□□□□ -1.12
COL5A1-202ENST00000371820 DPF1Q92782 380 aa8.05□□□□□ -1.12
COL5A1-202ENST00000371820 CHCHD1Q96BP2 118 aaKnown RBP8.05□□□□□ -1.12
COL5A1-202ENST00000371820 FXYD5Q96DB9 178 aa8.05□□□□□ -1.12
COL5A1-202ENST00000371820 MCRIP2Q9BUT9 160 aaKnown RBP8.05□□□□□ -1.12
COL5A1-202ENST00000371820 RNASE7Q9H1E1 156 aaKnown RBP8.05□□□□□ -1.12
COL5A1-202ENST00000371820 HIGD1AQ9Y241 93 aa8.05□□□□□ -1.12
COL5A1-202ENST00000371820 ZFP30Q9Y2G7 519 aa8.05□□□□□ -1.12
COL5A1-202ENST00000371820 F11RQ9Y624 299 aaKnown RBP8.05□□□□□ -1.12
COL5A1-202ENST00000371820 A0A1W2PS18 150 aa8.04□□□□□ -1.12
COL5A1-202ENST00000371820 GRIFINA4D1Z8 144 aa8.04□□□□□ -1.12
COL5A1-202ENST00000371820 SLC25A17O43808 307 aa8.04□□□□□ -1.12
COL5A1-202ENST00000371820 HLA-DRB1P01911 266 aa8.04□□□□□ -1.12
COL5A1-202ENST00000371820 IGF1P05019 195 aa8.04□□□□□ -1.12
COL5A1-202ENST00000371820 RPLP1P05386 114 aaKnown RBP8.04□□□□□ -1.12
COL5A1-202ENST00000371820 MFAP2P55001 183 aa8.04□□□□□ -1.12
COL5A1-202ENST00000371820 GAGE1Q13065 139 aa8.04□□□□□ -1.12
COL5A1-202ENST00000371820 FOXE3Q13461 319 aa8.04□□□□□ -1.12
COL5A1-202ENST00000371820 Q6AWC8 147 aa8.04□□□□□ -1.12
COL5A1-202ENST00000371820 PATE2Q6UY27 113 aa8.04□□□□□ -1.12
COL5A1-202ENST00000371820 Q6ZWC4 215 aa8.04□□□□□ -1.12
COL5A1-202ENST00000371820 PPP1R27Q86WC6 154 aa8.04□□□□□ -1.12
COL5A1-202ENST00000371820 NHLRC2Q8NBF2 726 aa8.04□□□□□ -1.12
COL5A1-202ENST00000371820 KLHL30-AS1Q8NEE0 82 aa8.04□□□□□ -1.12
COL5A1-202ENST00000371820 VN1R17PQ8TDU5 208 aa8.04□□□□□ -1.12
COL5A1-202ENST00000371820 LINC00527Q9UJ94 153 aa8.04□□□□□ -1.12
COL5A1-202ENST00000371820 TP53TG3Q9ULZ0 132 aa8.04□□□□□ -1.12
COL5A1-202ENST00000371820 IGKV1D-37A0A075B6S9 117 aa8.03□□□□□ -1.12
COL5A1-202ENST00000371820 BMPR1BO00238 502 aa8.03□□□□□ -1.12
COL5A1-202ENST00000371820 NUPR1O60356 82 aa8.03□□□□□ -1.12
COL5A1-202ENST00000371820 P01737 135 aa8.03□□□□□ -1.12
COL5A1-202ENST00000371820 MYOD1P15172 320 aa8.03□□□□□ -1.12
COL5A1-202ENST00000371820 ORM2P19652 201 aa8.03□□□□□ -1.12
COL5A1-202ENST00000371820 GATA2P23769 480 aaPredicted RBP8.03□□□□□ -1.12
COL5A1-202ENST00000371820 SRIP30626 198 aa8.03□□□□□ -1.12
COL5A1-202ENST00000371820 FOXA3P55318 350 aaPredicted RBP8.03□□□□□ -1.12
COL5A1-202ENST00000371820 KRTDAPP60985 99 aa8.03□□□□□ -1.12
COL5A1-202ENST00000371820 HBBP68871 147 aa8.03□□□□□ -1.12
COL5A1-202ENST00000371820 PLGLAQ15195 96 aa8.03□□□□□ -1.12
COL5A1-202ENST00000371820 TNXAQ16473 311 aa8.03□□□□□ -1.12
COL5A1-202ENST00000371820 MLANAQ16655 118 aa8.03□□□□□ -1.12
COL5A1-202ENST00000371820 C5orf64Q2M2E5 130 aa8.03□□□□□ -1.12
COL5A1-202ENST00000371820 COL5A1-AS1Q5SY13 56 aa8.03□□□□□ -1.12
COL5A1-202ENST00000371820 BPIFA4PQ86YQ2 179 aa8.03□□□□□ -1.12
COL5A1-202ENST00000371820 NUP35Q8NFH5 326 aa8.03□□□□□ -1.12
COL5A1-202ENST00000371820 NPBQ8NG41 125 aa8.03□□□□□ -1.12
COL5A1-202ENST00000371820 NEU1Q99519 415 aa8.03□□□□□ -1.12
COL5A1-202ENST00000371820 NDFIP1Q9BT67 221 aa8.03□□□□□ -1.12
COL5A1-202ENST00000371820 MLST8Q9BVC4 326 aa8.03□□□□□ -1.12
COL5A1-202ENST00000371820 RPP21Q9H633 154 aaKnown RBP8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms