RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 UBE2KP61086 200 aa3.29□□□□□ -1.88
RNU4-39P-201ENST00000362455 RPL30P62888 115 aaKnown RBP3.29□□□□□ -1.88
RNU4-39P-201ENST00000362455 HLA-DRB3P79483 266 aa3.29□□□□□ -1.88
RNU4-39P-201ENST00000362455 TNXAQ16473 311 aa3.29□□□□□ -1.88
RNU4-39P-201ENST00000362455 YIF1BQ5BJH7 314 aa3.29□□□□□ -1.88
RNU4-39P-201ENST00000362455 CLEC19AQ6UXS0 136 aa3.29□□□□□ -1.88
RNU4-39P-201ENST00000362455 NECAP1Q8NC96 275 aa3.29□□□□□ -1.88
RNU4-39P-201ENST00000362455 MRPL48Q96GC5 212 aaKnown RBP3.29□□□□□ -1.88
RNU4-39P-201ENST00000362455 FAM19A4Q96LR4 140 aa3.29□□□□□ -1.88
RNU4-39P-201ENST00000362455 Q96MT0 163 aa3.29□□□□□ -1.88
RNU4-39P-201ENST00000362455 SCRT1Q9BWW7 348 aa3.29□□□□□ -1.88
RNU4-39P-201ENST00000362455 ABRACLQ9P1F3 81 aa3.29□□□□□ -1.88
RNU4-39P-201ENST00000362455 FAT1Q14517 4588 aa3.29□□□□□ -1.88
RNU4-39P-201ENST00000362455 TRBV6-7A0A0A0MS04 114 aa3.28□□□□□ -1.88
RNU4-39P-201ENST00000362455 IGHV7-4-1A0A0J9YVY3 117 aa3.28□□□□□ -1.88
RNU4-39P-201ENST00000362455 CRYZL1O95825 349 aa3.28□□□□□ -1.88
RNU4-39P-201ENST00000362455 PTTG1O95997 202 aa3.28□□□□□ -1.88
RNU4-39P-201ENST00000362455 APOA2P02652 100 aa3.28□□□□□ -1.88
RNU4-39P-201ENST00000362455 SAA1P0DJI8 122 aaPredicted RBP3.28□□□□□ -1.88
RNU4-39P-201ENST00000362455 CELP19835 753 aa3.28□□□□□ -1.88
RNU4-39P-201ENST00000362455 NUP62P37198 522 aaPredicted RBP3.28□□□□□ -1.88
RNU4-39P-201ENST00000362455 IFITM3Q01628 133 aa3.28□□□□□ -1.88
RNU4-39P-201ENST00000362455 RPL18AQ02543 176 aaKnown RBP3.28□□□□□ -1.88
RNU4-39P-201ENST00000362455 TMPRSS11AQ6ZMR5 421 aa3.28□□□□□ -1.88
RNU4-39P-201ENST00000362455 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.28□□□□□ -1.88
RNU4-39P-201ENST00000362455 MAFIPQ8WZ33 124 aa3.28□□□□□ -1.88
RNU4-39P-201ENST00000362455 ARHGAP5-AS1Q96IT6 56 aa3.28□□□□□ -1.88
RNU4-39P-201ENST00000362455 PHB2Q99623 299 aa3.28□□□□□ -1.88
RNU4-39P-201ENST00000362455 PECRQ9BY49 303 aa3.28□□□□□ -1.88
RNU4-39P-201ENST00000362455 OR2D2Q9H210 308 aa3.28□□□□□ -1.88
RNU4-39P-201ENST00000362455 PLEKHJ1Q9NW61 149 aa3.28□□□□□ -1.88
RNU4-39P-201ENST00000362455 CKLFQ9UBR5 152 aa3.28□□□□□ -1.88
RNU4-39P-201ENST00000362455 TRAV3A0A0B4J244 114 aa3.27□□□□□ -1.89
RNU4-39P-201ENST00000362455 IGLL5B9A064 214 aa3.27□□□□□ -1.89
RNU4-39P-201ENST00000362455 FABP7O15540 132 aa3.27□□□□□ -1.89
RNU4-39P-201ENST00000362455 UBBP0CG47 229 aa3.27□□□□□ -1.89
RNU4-39P-201ENST00000362455 PSMB6P28072 239 aa3.27□□□□□ -1.89
RNU4-39P-201ENST00000362455 ST3GAL4Q11206 333 aa3.27□□□□□ -1.89
RNU4-39P-201ENST00000362455 ACSM3Q53FZ2 586 aa3.27□□□□□ -1.89
RNU4-39P-201ENST00000362455 ZNF773Q6PK81 442 aa3.27□□□□□ -1.89
RNU4-39P-201ENST00000362455 ACOT12Q8WYK0 555 aa3.27□□□□□ -1.89
RNU4-39P-201ENST00000362455 C18orf15Q96N68 181 aa3.27□□□□□ -1.89
RNU4-39P-201ENST00000362455 SPIN2AQ99865 258 aa3.27□□□□□ -1.89
RNU4-39P-201ENST00000362455 SPIN2BQ9BPZ2 258 aa3.27□□□□□ -1.89
RNU4-39P-201ENST00000362455 ZNF436Q9C0F3 470 aaPredicted RBP3.27□□□□□ -1.89
RNU4-39P-201ENST00000362455 C12orf4Q9NQ89 552 aa3.27□□□□□ -1.89
RNU4-39P-201ENST00000362455 SLC2A9Q9NRM0 540 aa3.27□□□□□ -1.89
RNU4-39P-201ENST00000362455 CYTL1Q9NRR1 136 aa3.27□□□□□ -1.89
RNU4-39P-201ENST00000362455 IGHV3OR16-8A0A075B7F1 116 aa3.26□□□□□ -1.89
RNU4-39P-201ENST00000362455 IGLC7A0M8Q6 106 aa3.26□□□□□ -1.89
RNU4-39P-201ENST00000362455 J3QRK9 145 aa3.26□□□□□ -1.89
RNU4-39P-201ENST00000362455 HLA-DQB1P01920 261 aa3.26□□□□□ -1.89
RNU4-39P-201ENST00000362455 CD74P04233 296 aa3.26□□□□□ -1.89
RNU4-39P-201ENST00000362455 REG1AP05451 166 aa3.26□□□□□ -1.89
RNU4-39P-201ENST00000362455 CLDN12P56749 244 aa3.26□□□□□ -1.89
RNU4-39P-201ENST00000362455 MED21Q13503 144 aa3.26□□□□□ -1.89
RNU4-39P-201ENST00000362455 CDK10Q15131 360 aa3.26□□□□□ -1.89
RNU4-39P-201ENST00000362455 ATP6V1FQ16864 119 aa3.26□□□□□ -1.89
RNU4-39P-201ENST00000362455 RTL8BQ17RB0 113 aa3.26□□□□□ -1.89
RNU4-39P-201ENST00000362455 VMA21Q3ZAQ7 101 aa3.26□□□□□ -1.89
RNU4-39P-201ENST00000362455 C6orf99Q4VX62 202 aa3.26□□□□□ -1.89
RNU4-39P-201ENST00000362455 TMEM91Q6ZNR0 172 aa3.26□□□□□ -1.89
RNU4-39P-201ENST00000362455 H1FOOQ8IZA3 346 aaPredicted RBP3.26□□□□□ -1.89
RNU4-39P-201ENST00000362455 Q8NAQ8 132 aa3.26□□□□□ -1.89
RNU4-39P-201ENST00000362455 OR11H2Q8NH07 326 aa3.26□□□□□ -1.89
RNU4-39P-201ENST00000362455 TMEM167AQ8TBQ9 72 aa3.26□□□□□ -1.89
RNU4-39P-201ENST00000362455 SLC25A46Q96AG3 418 aa3.26□□□□□ -1.89
RNU4-39P-201ENST00000362455 OR10C1Q96KK4 312 aa3.26□□□□□ -1.89
RNU4-39P-201ENST00000362455 CMSS1Q9BQ75 279 aaKnown RBP3.26□□□□□ -1.89
RNU4-39P-201ENST00000362455 OR51E2Q9H255 320 aa3.26□□□□□ -1.89
RNU4-39P-201ENST00000362455 ARV1Q9H2C2 271 aa3.26□□□□□ -1.89
RNU4-39P-201ENST00000362455 C11orf68Q9H3H3 251 aaKnown RBP3.26□□□□□ -1.89
RNU4-39P-201ENST00000362455 RHBDL2Q9NX52 303 aa3.26□□□□□ -1.89
RNU4-39P-201ENST00000362455 MRPL27Q9P0M9 148 aaKnown RBP3.26□□□□□ -1.89
RNU4-39P-201ENST00000362455 KLF12Q9Y4X4 402 aa3.26□□□□□ -1.89
RNU4-39P-201ENST00000362455 ORC6Q9Y5N6 252 aa3.26□□□□□ -1.89
RNU4-39P-201ENST00000362455 MYCBP2O75592 4640 aa3.26□□□□□ -1.89
RNU4-39P-201ENST00000362455 C7orf66A4D0T2 115 aa3.25□□□□□ -1.89
RNU4-39P-201ENST00000362455 LRCOL1A6NCL2 159 aa3.25□□□□□ -1.89
RNU4-39P-201ENST00000362455 EFCAB10A6NFE3 127 aa3.25□□□□□ -1.89
RNU4-39P-201ENST00000362455 M0R2N4 97 aa3.25□□□□□ -1.89
RNU4-39P-201ENST00000362455 UPK1BO75841 260 aa3.25□□□□□ -1.89
RNU4-39P-201ENST00000362455 IFNA4P05014 189 aa3.25□□□□□ -1.89
RNU4-39P-201ENST00000362455 CTSDP07339 412 aaPredicted RBP3.25□□□□□ -1.89
RNU4-39P-201ENST00000362455 UCHL1P09936 223 aa3.25□□□□□ -1.89
RNU4-39P-201ENST00000362455 HLA-DMBP28068 263 aa3.25□□□□□ -1.89
RNU4-39P-201ENST00000362455 RPL27AP46776 148 aaKnown RBP3.25□□□□□ -1.89
RNU4-39P-201ENST00000362455 GLT8D1Q68CQ7 371 aa3.25□□□□□ -1.89
RNU4-39P-201ENST00000362455 FAM24BQ8N5W8 94 aa3.25□□□□□ -1.89
RNU4-39P-201ENST00000362455 FKBP14Q9NWM8 211 aa3.25□□□□□ -1.89
RNU4-39P-201ENST00000362455 LSM2Q9Y333 95 aaKnown RBP3.25□□□□□ -1.89
RNU4-39P-201ENST00000362455 RBMX2Q9Y388 322 aaKnown RBP3.25□□□□□ -1.89
RNU4-39P-201ENST00000362455 UBR4Q5T4S7 5183 aa3.24□□□□□ -1.89
RNU4-39P-201ENST00000362455 SRRM2Q9UQ35 2752 aaKnown RBP3.24□□□□□ -1.89
RNU4-39P-201ENST00000362455 VPS13BQ7Z7G8 4022 aa3.24□□□□□ -1.89
RNU4-39P-201ENST00000362455 IGHV3-49A0A0A0MS15 119 aa3.24□□□□□ -1.89
RNU4-39P-201ENST00000362455 TRBV7-1A0A0A6YYK4 115 aa3.24□□□□□ -1.89
RNU4-39P-201ENST00000362455 IGHV3-21A0A0B4J1V1 117 aa3.24□□□□□ -1.89
RNU4-39P-201ENST00000362455 OR2T8A6NH00 312 aa3.24□□□□□ -1.89
RNU4-39P-201ENST00000362455 K7EIM0 57 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms