RNA–Protein interactions for RNA: ENST00000360467.5

COL4A2-201, Transcript of collagen type IV alpha 2 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A2, Length 6,281 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-201ENST00000360467 GBF1Q92538 1859 aa13.72□□□□□ -0.21
COL4A2-201ENST00000360467 PHF3Q92576 2039 aaKnown RBP13.72□□□□□ -0.21
COL4A2-201ENST00000360467 A0A087X0K7 114 aa13.72□□□□□ -0.21
COL4A2-201ENST00000360467 C17orf58Q2M2W7 97 aa13.72□□□□□ -0.21
COL4A2-201ENST00000360467 ZNRF2Q8NHG8 242 aa13.72□□□□□ -0.21
COL4A2-201ENST00000360467 ANXA2RQ3ZCQ2 193 aa13.72□□□□□ -0.21
COL4A2-201ENST00000360467 HEATR1Q9H583 2144 aaKnown RBP13.72□□□□□ -0.21
COL4A2-201ENST00000360467 NXPH4O95158 308 aa13.72□□□□□ -0.21
COL4A2-201ENST00000360467 HOXD3P31249 432 aaPredicted RBP13.72□□□□□ -0.21
COL4A2-201ENST00000360467 C8orf86Q6ZUL3 223 aa13.71□□□□□ -0.21
COL4A2-201ENST00000360467 ANAPC10Q9UM13 185 aa13.71□□□□□ -0.21
COL4A2-201ENST00000360467 TRBV25-1A0A075B6N4 114 aa13.71□□□□□ -0.21
COL4A2-201ENST00000360467 TCF15Q12870 199 aa13.71□□□□□ -0.21
COL4A2-201ENST00000360467 THAP8Q8NA92 274 aa13.71□□□□□ -0.21
COL4A2-201ENST00000360467 FANCMQ8IYD8 2048 aa13.71□□□□□ -0.21
COL4A2-201ENST00000360467 IGHV4-59P01825 116 aa13.71□□□□□ -0.21
COL4A2-201ENST00000360467 DEFB112Q30KQ8 113 aa13.71□□□□□ -0.21
COL4A2-201ENST00000360467 RNASE13Q5GAN3 156 aaKnown RBP13.71□□□□□ -0.21
COL4A2-201ENST00000360467 DLX4Q92988 240 aaPredicted RBP13.71□□□□□ -0.21
COL4A2-201ENST00000360467 A8MWV9 139 aa13.71□□□□□ -0.22
COL4A2-201ENST00000360467 TRPT1Q86TN4 253 aaKnown RBP13.71□□□□□ -0.22
COL4A2-201ENST00000360467 BCL6BQ8N143 479 aaPredicted RBP13.71□□□□□ -0.22
COL4A2-201ENST00000360467 TP53TG1Q9Y2A0 90 aa13.71□□□□□ -0.22
COL4A2-201ENST00000360467 PMVKQ15126 192 aa13.7□□□□□ -0.22
COL4A2-201ENST00000360467 TMEM256Q8N2U0 113 aa13.7□□□□□ -0.22
COL4A2-201ENST00000360467 IGKV1-6A0A0C4DH72 117 aa13.7□□□□□ -0.22
COL4A2-201ENST00000360467 IGKV1-39P01597 117 aa13.7□□□□□ -0.22
COL4A2-201ENST00000360467 IGKV1D-39P04432 117 aa13.7□□□□□ -0.22
COL4A2-201ENST00000360467 RPL32P62910 135 aaKnown RBP13.7□□□□□ -0.22
COL4A2-201ENST00000360467 NKAPP1Q8N9T2 125 aa13.7□□□□□ -0.22
COL4A2-201ENST00000360467 FRMPD3Q5JV73 1810 aa13.7□□□□□ -0.22
COL4A2-201ENST00000360467 PLXNA3P51805 1871 aa13.7□□□□□ -0.22
COL4A2-201ENST00000360467 FGF16O43320 207 aa13.7□□□□□ -0.22
COL4A2-201ENST00000360467 LOXP28300 417 aaPredicted RBP13.7□□□□□ -0.22
COL4A2-201ENST00000360467 PTPRDP23468 1912 aa13.69□□□□□ -0.22
COL4A2-201ENST00000360467 TRBV6-6A0A0A6YYG2 114 aa13.69□□□□□ -0.22
COL4A2-201ENST00000360467 MMP23AO75900 390 aa13.69□□□□□ -0.22
COL4A2-201ENST00000360467 ZNF833PQ6ZTB9 187 aa13.69□□□□□ -0.22
COL4A2-201ENST00000360467 RASL11AQ6T310 242 aa13.69□□□□□ -0.22
COL4A2-201ENST00000360467 FAM215AQ9Y5M1 114 aa13.69□□□□□ -0.22
COL4A2-201ENST00000360467 EREGO14944 169 aa13.69□□□□□ -0.22
COL4A2-201ENST00000360467 HOXB4P17483 251 aaPredicted RBP13.69□□□□□ -0.22
COL4A2-201ENST00000360467 TNFRSF6BO95407 300 aa13.69□□□□□ -0.22
COL4A2-201ENST00000360467 MYMXA0A1B0GTQ4 84 aa13.68□□□□□ -0.22
COL4A2-201ENST00000360467 IGFL3Q6UXB1 125 aa13.68□□□□□ -0.22
COL4A2-201ENST00000360467 HIST1H2BLQ99880 126 aa13.68□□□□□ -0.22
COL4A2-201ENST00000360467 RSPO3Q9BXY4 272 aaPredicted RBP13.68□□□□□ -0.22
COL4A2-201ENST00000360467 Q9HAA7 133 aa13.68□□□□□ -0.22
COL4A2-201ENST00000360467 IGLV3-9A0A075B6K5 115 aa13.68□□□□□ -0.22
COL4A2-201ENST00000360467 FOXL2NBQ6ZUU3 175 aa13.68□□□□□ -0.22
COL4A2-201ENST00000360467 HSD52Q0P140 79 aa13.67□□□□□ -0.22
COL4A2-201ENST00000360467 SUMO4Q6EEV6 95 aa13.67□□□□□ -0.22
COL4A2-201ENST00000360467 WT1P19544 449 aaPredicted RBP13.67□□□□□ -0.22
COL4A2-201ENST00000360467 VWC2Q2TAL6 325 aa13.67□□□□□ -0.22
COL4A2-201ENST00000360467 PCP4P48539 62 aa13.67□□□□□ -0.22
COL4A2-201ENST00000360467 IGKV1OR2-108A0A075B7D4 117 aa13.67□□□□□ -0.22
COL4A2-201ENST00000360467 ESDP10768 282 aa13.67□□□□□ -0.22
COL4A2-201ENST00000360467 SIP14410 1827 aa13.67□□□□□ -0.22
COL4A2-201ENST00000360467 NBL1P41271 181 aa13.66□□□□□ -0.22
COL4A2-201ENST00000360467 LYPD1Q8N2G4 141 aa13.66□□□□□ -0.22
COL4A2-201ENST00000360467 Q6ZQT7 251 aa13.66□□□□□ -0.22
COL4A2-201ENST00000360467 HAPLN4Q86UW8 402 aa13.66□□□□□ -0.22
COL4A2-201ENST00000360467 Q8TCH9 128 aa13.66□□□□□ -0.22
COL4A2-201ENST00000360467 TMEM126AQ9H061 195 aa13.66□□□□□ -0.22
COL4A2-201ENST00000360467 LRRK1Q38SD2 2015 aa13.66□□□□□ -0.22
COL4A2-201ENST00000360467 IGHV1OR15-1A0A075B7D0 117 aa13.66□□□□□ -0.22
COL4A2-201ENST00000360467 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.66□□□□□ -0.22
COL4A2-201ENST00000360467 LINC00587B1AMM8 73 aa13.66□□□□□ -0.22
COL4A2-201ENST00000360467 LY6G5BQ8NDX9 201 aa13.66□□□□□ -0.22
COL4A2-201ENST00000360467 LGALS1P09382 135 aaKnown RBP13.66□□□□□ -0.22
COL4A2-201ENST00000360467 C2orf82Q6UX34 121 aa13.66□□□□□ -0.22
COL4A2-201ENST00000360467 ZNF524Q96C55 264 aa13.66□□□□□ -0.22
COL4A2-201ENST00000360467 NDUFA4L2Q9NRX3 87 aa13.66□□□□□ -0.22
COL4A2-201ENST00000360467 SMPXQ9UHP9 88 aa13.66□□□□□ -0.22
COL4A2-201ENST00000360467 INTS1Q8N201 2190 aaKnown RBP13.66□□□□□ -0.22
COL4A2-201ENST00000360467 HELZP42694 1942 aaKnown RBP13.66□□□□□ -0.22
COL4A2-201ENST00000360467 GAGE2AQ6NT46 116 aa13.66□□□□□ -0.22
COL4A2-201ENST00000360467 NOP10Q9NPE3 64 aaKnown RBP13.66□□□□□ -0.22
COL4A2-201ENST00000360467 PI4KAP42356 2102 aa13.66□□□□□ -0.22
COL4A2-201ENST00000360467 FAM186AA6NE01 2351 aa13.65□□□□□ -0.22
COL4A2-201ENST00000360467 APRG1Q8IVJ8 170 aa13.65□□□□□ -0.22
COL4A2-201ENST00000360467 SPRNQ5BIV9 151 aa13.65□□□□□ -0.22
COL4A2-201ENST00000360467 POLEQ07864 2286 aa13.65□□□□□ -0.22
COL4A2-201ENST00000360467 J3QLI3 93 aa13.65□□□□□ -0.22
COL4A2-201ENST00000360467 AMBPP02760 352 aa13.65□□□□□ -0.22
COL4A2-201ENST00000360467 ANGP03950 147 aaKnown RBP13.65□□□□□ -0.22
COL4A2-201ENST00000360467 GAGE2EQ4V326 116 aa13.65□□□□□ -0.22
COL4A2-201ENST00000360467 TMEM75Q8N9X5 138 aa13.65□□□□□ -0.22
COL4A2-201ENST00000360467 ATP6V0BQ99437 205 aa13.65□□□□□ -0.22
COL4A2-201ENST00000360467 GAGE2DQ9UEU5 116 aa13.65□□□□□ -0.22
COL4A2-201ENST00000360467 DOCK8Q8NF50 2099 aa13.65□□□□□ -0.22
COL4A2-201ENST00000360467 TRAV25A0A0B4J276 109 aa13.65□□□□□ -0.22
COL4A2-201ENST00000360467 STPG4Q8N801 248 aa13.65□□□□□ -0.22
COL4A2-201ENST00000360467 SNHG12Q9BXW3 62 aa13.64□□□□□ -0.23
COL4A2-201ENST00000360467 F6UB75 175 aa13.64□□□□□ -0.23
COL4A2-201ENST00000360467 TMEM14BQ9NUH8 114 aa13.64□□□□□ -0.23
COL4A2-201ENST00000360467 IGKV2D-24A0A075B6R9 120 aa13.64□□□□□ -0.23
COL4A2-201ENST00000360467 PFN1P07737 140 aaKnown RBP13.64□□□□□ -0.23
COL4A2-201ENST00000360467 I3L3M4 83 aa13.64□□□□□ -0.23
COL4A2-201ENST00000360467 SEC11AP67812 179 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms