RNA–Protein interactions for RNA: ENST00000360046.9

HOXA4-201, Transcript of homeobox A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA4, Length 1,747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-201ENST00000360046 NDUFS6O75380 124 aaKnown RBP16.46■□□□□ 0.23
HOXA4-201ENST00000360046 CSN1S1P47710 185 aa16.46■□□□□ 0.23
HOXA4-201ENST00000360046 PAFAH1B2P68402 229 aa16.46■□□□□ 0.23
HOXA4-201ENST00000360046 DCANP1Q8TF63 244 aa16.46■□□□□ 0.23
HOXA4-201ENST00000360046 C11orf52Q96A22 123 aa16.46■□□□□ 0.23
HOXA4-201ENST00000360046 ISLRO14498 428 aa16.45■□□□□ 0.22
HOXA4-201ENST00000360046 BTN1A1Q13410 526 aa16.45■□□□□ 0.22
HOXA4-201ENST00000360046 SAMD13Q5VXD3 122 aa16.45■□□□□ 0.22
HOXA4-201ENST00000360046 HIST1H2BAQ96A08 127 aa16.45■□□□□ 0.22
HOXA4-201ENST00000360046 ATG101Q9BSB4 218 aa16.45■□□□□ 0.22
HOXA4-201ENST00000360046 DERL1Q9BUN8 251 aa16.45■□□□□ 0.22
HOXA4-201ENST00000360046 ZNF705FA8MVS1 300 aaPredicted RBP16.45■□□□□ 0.22
HOXA4-201ENST00000360046 TCRAP04437 139 aa16.45■□□□□ 0.22
HOXA4-201ENST00000360046 ADCYAP1P18509 176 aa16.45■□□□□ 0.22
HOXA4-201ENST00000360046 AKR1C3P42330 323 aa16.45■□□□□ 0.22
HOXA4-201ENST00000360046 PARLQ9H300 379 aa16.45■□□□□ 0.22
HOXA4-201ENST00000360046 PRELID1Q9Y255 219 aa16.45■□□□□ 0.22
HOXA4-201ENST00000360046 TSPAN4O14817 238 aa16.44■□□□□ 0.22
HOXA4-201ENST00000360046 ID1P41134 155 aa16.44■□□□□ 0.22
HOXA4-201ENST00000360046 GOLT1AQ6ZVE7 132 aa16.44■□□□□ 0.22
HOXA4-201ENST00000360046 SVBPQ8N300 66 aa16.44■□□□□ 0.22
HOXA4-201ENST00000360046 CLEC5AQ9NY25 188 aa16.44■□□□□ 0.22
HOXA4-201ENST00000360046 CD33P20138 364 aa16.43■□□□□ 0.22
HOXA4-201ENST00000360046 C10orf91Q5T1B1 145 aa16.43■□□□□ 0.22
HOXA4-201ENST00000360046 LCN12Q6JVE5 192 aa16.43■□□□□ 0.22
HOXA4-201ENST00000360046 SPATA3Q8NHX4 192 aa16.43■□□□□ 0.22
HOXA4-201ENST00000360046 C2CD4CQ8TF44 421 aa16.43■□□□□ 0.22
HOXA4-201ENST00000360046 C20orf173Q96LM9 149 aa16.43■□□□□ 0.22
HOXA4-201ENST00000360046 SMIM7Q9BQ49 75 aa16.43■□□□□ 0.22
HOXA4-201ENST00000360046 TRRAPQ9Y4A5 3859 aa16.43■□□□□ 0.22
HOXA4-201ENST00000360046 ZNF727A8MUV8 499 aa16.42■□□□□ 0.22
HOXA4-201ENST00000360046 DIRC3C9JPN6 131 aa16.42■□□□□ 0.22
HOXA4-201ENST00000360046 K7EQG2 157 aa16.42■□□□□ 0.22
HOXA4-201ENST00000360046 CNN1P51911 297 aaKnown RBP16.42■□□□□ 0.22
HOXA4-201ENST00000360046 PSG3Q16557 428 aa16.42■□□□□ 0.22
HOXA4-201ENST00000360046 ZNF738Q8NE65 137 aa16.42■□□□□ 0.22
HOXA4-201ENST00000360046 LINC00479Q96M42 142 aa16.42■□□□□ 0.22
HOXA4-201ENST00000360046 SEC11CQ9BY50 192 aa16.42■□□□□ 0.22
HOXA4-201ENST00000360046 TRAV25A0A0B4J276 109 aa16.42■□□□□ 0.22
HOXA4-201ENST00000360046 RPL35P42766 123 aaKnown RBP16.42■□□□□ 0.22
HOXA4-201ENST00000360046 CARHSP1Q9Y2V2 147 aaKnown RBP16.42■□□□□ 0.22
HOXA4-201ENST00000360046 TRAV34A0A0B4J273 112 aa16.41■□□□□ 0.22
HOXA4-201ENST00000360046 IZUMO1RA6ND01 250 aa16.41■□□□□ 0.22
HOXA4-201ENST00000360046 K7EQM0 130 aa16.41■□□□□ 0.22
HOXA4-201ENST00000360046 ZNF688P0C7X2 276 aa16.41■□□□□ 0.22
HOXA4-201ENST00000360046 SNRPD3P62318 126 aaKnown RBP16.41■□□□□ 0.22
HOXA4-201ENST00000360046 GUCA2BQ16661 112 aa16.41■□□□□ 0.22
HOXA4-201ENST00000360046 FAM24BQ8N5W8 94 aa16.41■□□□□ 0.22
HOXA4-201ENST00000360046 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.41■□□□□ 0.22
HOXA4-201ENST00000360046 MRPL53Q96EL3 112 aaKnown RBP16.41■□□□□ 0.22
HOXA4-201ENST00000360046 LOC105371267A0A1B0GV96 52 aa16.4■□□□□ 0.22
HOXA4-201ENST00000360046 IGLV1-51P01701 117 aa16.4■□□□□ 0.22
HOXA4-201ENST00000360046 UBE2G1P62253 170 aa16.4■□□□□ 0.22
HOXA4-201ENST00000360046 SGK494Q96LW2 274 aa16.4■□□□□ 0.22
HOXA4-201ENST00000360046 SPAG8Q99932 426 aaPredicted RBP16.4■□□□□ 0.22
HOXA4-201ENST00000360046 IGKV2-40A0A087WW87 121 aaPredicted RBP16.39■□□□□ 0.21
HOXA4-201ENST00000360046 IGKV2D-40P01614 121 aaPredicted RBP16.39■□□□□ 0.21
HOXA4-201ENST00000360046 PSMG4Q5JS54 123 aa16.39■□□□□ 0.21
HOXA4-201ENST00000360046 TRAV2A0A0B4J234 112 aa16.39■□□□□ 0.21
HOXA4-201ENST00000360046 OR4C46A6NHA9 309 aa16.39■□□□□ 0.21
HOXA4-201ENST00000360046 PRAC2D3DTV9 90 aa16.39■□□□□ 0.21
HOXA4-201ENST00000360046 FAM74A3Q4VXF1 159 aa16.39■□□□□ 0.21
HOXA4-201ENST00000360046 ARL6IP6Q8N6S5 226 aa16.39■□□□□ 0.21
HOXA4-201ENST00000360046 NIPSNAP3BQ9BS92 247 aa16.39■□□□□ 0.21
HOXA4-201ENST00000360046 NOTCH3Q9UM47 2321 aa16.38■□□□□ 0.21
HOXA4-201ENST00000360046 TRAV8-1A0A0A6YYK1 113 aa16.38■□□□□ 0.21
HOXA4-201ENST00000360046 C9orf66Q5T8R8 295 aa16.38■□□□□ 0.21
HOXA4-201ENST00000360046 FMC1Q96HJ9 113 aa16.38■□□□□ 0.21
HOXA4-201ENST00000360046 ANK2Q01484 3957 aa16.38■□□□□ 0.21
HOXA4-201ENST00000360046 SERTM2A0A1B0GWG4 89 aa16.37■□□□□ 0.21
HOXA4-201ENST00000360046 OR2K2Q8NGT1 345 aa16.37■□□□□ 0.21
HOXA4-201ENST00000360046 SORL1Q92673 2214 aa16.37■□□□□ 0.21
HOXA4-201ENST00000360046 SNAPINO95295 136 aa16.36■□□□□ 0.21
HOXA4-201ENST00000360046 TMEM183BQ1AE95 376 aa16.36■□□□□ 0.21
HOXA4-201ENST00000360046 CENPWQ5EE01 88 aa16.36■□□□□ 0.21
HOXA4-201ENST00000360046 TMEM75Q8N9X5 138 aa16.36■□□□□ 0.21
HOXA4-201ENST00000360046 WFDC9Q8NEX5 89 aa16.36■□□□□ 0.21
HOXA4-201ENST00000360046 TRBV20OR9-2A0A075B6H5 130 aa16.36■□□□□ 0.21
HOXA4-201ENST00000360046 GNG4P50150 75 aa16.36■□□□□ 0.21
HOXA4-201ENST00000360046 INSL3P51460 131 aa16.36■□□□□ 0.21
HOXA4-201ENST00000360046 DEFB1P60022 68 aa16.36■□□□□ 0.21
HOXA4-201ENST00000360046 MCRIP2Q9BUT9 160 aaKnown RBP16.36■□□□□ 0.21
HOXA4-201ENST00000360046 KLF12Q9Y4X4 402 aa16.36■□□□□ 0.21
HOXA4-201ENST00000360046 DNHD1Q96M86 4753 aa16.35■□□□□ 0.21
HOXA4-201ENST00000360046 PGPEP1LA6NFU8 196 aa16.35■□□□□ 0.21
HOXA4-201ENST00000360046 S100A9P06702 114 aaKnown RBP16.35■□□□□ 0.21
HOXA4-201ENST00000360046 TAS2R60P59551 318 aa16.35■□□□□ 0.21
HOXA4-201ENST00000360046 TMEM241Q24JQ0 296 aa16.35■□□□□ 0.21
HOXA4-201ENST00000360046 VGLL1Q99990 258 aa16.35■□□□□ 0.21
HOXA4-201ENST00000360046 NAT8Q9UHE5 227 aa16.35■□□□□ 0.21
HOXA4-201ENST00000360046 ZNF256Q9Y2P7 627 aaPredicted RBP16.35■□□□□ 0.21
HOXA4-201ENST00000360046 PKD1L1Q8TDX9 2849 aa16.34■□□□□ 0.21
HOXA4-201ENST00000360046 ZNF705DP0CH99 300 aaPredicted RBP16.34■□□□□ 0.21
HOXA4-201ENST00000360046 ZNF705BP0CI00 300 aaPredicted RBP16.34■□□□□ 0.21
HOXA4-201ENST00000360046 IGLL1P15814 213 aa16.34■□□□□ 0.21
HOXA4-201ENST00000360046 ATRAIDQ6UW56 229 aa16.34■□□□□ 0.21
HOXA4-201ENST00000360046 PRNTQ86SH4 94 aa16.34■□□□□ 0.21
HOXA4-201ENST00000360046 RBAKDNA6NC62 111 aa16.33■□□□□ 0.21
HOXA4-201ENST00000360046 F6UB75 175 aa16.33■□□□□ 0.21
HOXA4-201ENST00000360046 IGLV2-11P01706 119 aa16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 189.8 ms