RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 A8MWP6 167 aa7.93□□□□□ -1.14
CHD3-202ENST00000358181 I3L3M4 83 aa7.93□□□□□ -1.14
CHD3-202ENST00000358181 LCTP09848 1927 aa7.92□□□□□ -1.14
CHD3-202ENST00000358181 A0A1W2PRE2 83 aa7.92□□□□□ -1.14
CHD3-202ENST00000358181 K7ERS5 55 aa7.92□□□□□ -1.14
CHD3-202ENST00000358181 EFNB3Q15768 340 aa7.92□□□□□ -1.14
CHD3-202ENST00000358181 LYPD2Q6UXB3 125 aa7.92□□□□□ -1.14
CHD3-202ENST00000358181 SCN10AQ9Y5Y9 1956 aa7.92□□□□□ -1.14
CHD3-202ENST00000358181 IGKV1-27A0A075B6S5 117 aa7.92□□□□□ -1.14
CHD3-202ENST00000358181 HSD52Q0P140 79 aa7.92□□□□□ -1.14
CHD3-202ENST00000358181 PPBPP02775 128 aa7.92□□□□□ -1.14
CHD3-202ENST00000358181 HERV-K104P63124 156 aa7.92□□□□□ -1.14
CHD3-202ENST00000358181 RPP25LQ8N5L8 163 aaKnown RBP7.92□□□□□ -1.14
CHD3-202ENST00000358181 FSTP19883 344 aa7.92□□□□□ -1.14
CHD3-202ENST00000358181 DYNAPQ8N1N2 210 aa7.92□□□□□ -1.14
CHD3-202ENST00000358181 PKIGQ9Y2B9 76 aa7.92□□□□□ -1.14
CHD3-202ENST00000358181 FOXE3Q13461 319 aa7.92□□□□□ -1.14
CHD3-202ENST00000358181 APRG1Q8IVJ8 170 aa7.92□□□□□ -1.14
CHD3-202ENST00000358181 ADAMTS7Q9UKP4 1686 aa7.92□□□□□ -1.14
CHD3-202ENST00000358181 FUSP35637 526 aaKnown RBP eCLIP7.91□□□□□ -1.14
CHD3-202ENST00000358181 NEUROG3Q9Y4Z2 214 aa7.91□□□□□ -1.14
CHD3-202ENST00000358181 BUB1B-PAK6H3BSN5 160 aa7.91□□□□□ -1.14
CHD3-202ENST00000358181 M0R2N4 97 aa7.91□□□□□ -1.14
CHD3-202ENST00000358181 SRCAPQ6ZRS2 3230 aa7.91□□□□□ -1.14
CHD3-202ENST00000358181 PLA2G1BP04054 148 aaKnown RBP7.91□□□□□ -1.14
CHD3-202ENST00000358181 BOD1L2Q8IYS8 172 aa7.91□□□□□ -1.14
CHD3-202ENST00000358181 WNK3Q9BYP7 1800 aa7.91□□□□□ -1.14
CHD3-202ENST00000358181 A0A1B0GWJ7 208 aa7.91□□□□□ -1.14
CHD3-202ENST00000358181 ATP5IP56385 69 aaPredicted RBP7.91□□□□□ -1.14
CHD3-202ENST00000358181 TRBV5-5A0A0J9YX44 114 aa7.91□□□□□ -1.14
CHD3-202ENST00000358181 C9orf139Q6ZV77 190 aa7.91□□□□□ -1.14
CHD3-202ENST00000358181 CACNA1GO43497 2377 aa7.91□□□□□ -1.14
CHD3-202ENST00000358181 SIPA1L1O43166 1804 aa7.91□□□□□ -1.14
CHD3-202ENST00000358181 ANKRD29Q8N6D5 301 aa7.91□□□□□ -1.14
CHD3-202ENST00000358181 COX7B2Q8TF08 81 aa7.91□□□□□ -1.14
CHD3-202ENST00000358181 TMEM178BH3BS89 294 aa7.9□□□□□ -1.14
CHD3-202ENST00000358181 ATP6V0E1O15342 81 aa7.9□□□□□ -1.14
CHD3-202ENST00000358181 MP68P56378 58 aa7.9□□□□□ -1.14
CHD3-202ENST00000358181 CTHRC1Q96CG8 243 aa7.9□□□□□ -1.14
CHD3-202ENST00000358181 IGHV1-24A0A0C4DH33 117 aa7.9□□□□□ -1.14
CHD3-202ENST00000358181 ZFP36P26651 326 aaKnown RBP7.9□□□□□ -1.14
CHD3-202ENST00000358181 MED12Q93074 2177 aa7.9□□□□□ -1.14
CHD3-202ENST00000358181 A0A1B0GX51 115 aa7.9□□□□□ -1.14
CHD3-202ENST00000358181 YPEL1O60688 119 aa7.9□□□□□ -1.14
CHD3-202ENST00000358181 IGHV4-30-4P0DP06 118 aa7.9□□□□□ -1.14
CHD3-202ENST00000358181 IGHV4-31P0DP07 118 aa7.9□□□□□ -1.14
CHD3-202ENST00000358181 YPEL2Q96QA6 119 aa7.9□□□□□ -1.14
CHD3-202ENST00000358181 ICOSQ9Y6W8 199 aa7.9□□□□□ -1.14
CHD3-202ENST00000358181 C5orf38Q86SI9 138 aa7.9□□□□□ -1.14
CHD3-202ENST00000358181 SRSF8Q9BRL6 282 aaKnown RBP7.9□□□□□ -1.14
CHD3-202ENST00000358181 ARMS2P0C7Q2 107 aa7.9□□□□□ -1.15
CHD3-202ENST00000358181 MINOS1Q5TGZ0 78 aa7.9□□□□□ -1.15
CHD3-202ENST00000358181 AMN1Q8IY45 258 aa7.9□□□□□ -1.15
CHD3-202ENST00000358181 OR11H6Q8NGC7 330 aa7.9□□□□□ -1.15
CHD3-202ENST00000358181 B9D2Q9BPU9 175 aa7.9□□□□□ -1.15
CHD3-202ENST00000358181 MINOS1-NBL1R4GNA1 71 aa7.9□□□□□ -1.15
CHD3-202ENST00000358181 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.9□□□□□ -1.15
CHD3-202ENST00000358181 IGKV2-29A2NJV5 120 aaPredicted RBP7.9□□□□□ -1.15
CHD3-202ENST00000358181 FGFBP3Q8TAT2 258 aa7.9□□□□□ -1.15
CHD3-202ENST00000358181 C9orf66Q5T8R8 295 aa7.89□□□□□ -1.15
CHD3-202ENST00000358181 C5orf24Q7Z6I8 188 aa7.89□□□□□ -1.15
CHD3-202ENST00000358181 IGKV1-6A0A0C4DH72 117 aa7.89□□□□□ -1.15
CHD3-202ENST00000358181 PRSS57Q6UWY2 283 aa7.89□□□□□ -1.15
CHD3-202ENST00000358181 ZNF664Q8N3J9 261 aa7.89□□□□□ -1.15
CHD3-202ENST00000358181 TSSC4Q9Y5U2 329 aaPredicted RBP7.89□□□□□ -1.15
CHD3-202ENST00000358181 WDR81Q562E7 1941 aa7.89□□□□□ -1.15
CHD3-202ENST00000358181 G3V318 75 aa7.89□□□□□ -1.15
CHD3-202ENST00000358181 UBE2CO00762 179 aa7.89□□□□□ -1.15
CHD3-202ENST00000358181 LINC01590Q5TEZ4 76 aa7.89□□□□□ -1.15
CHD3-202ENST00000358181 ADAMTSL5Q6ZMM2 481 aa7.89□□□□□ -1.15
CHD3-202ENST00000358181 SLC25A48Q6ZT89 311 aaKnown RBP7.89□□□□□ -1.15
CHD3-202ENST00000358181 OCC1Q8TAD7 63 aa7.89□□□□□ -1.15
CHD3-202ENST00000358181 MRPL36Q9P0J6 103 aaKnown RBP7.89□□□□□ -1.15
CHD3-202ENST00000358181 IGLV3-9A0A075B6K5 115 aa7.89□□□□□ -1.15
CHD3-202ENST00000358181 NHLRC3Q5JS37 347 aa7.89□□□□□ -1.15
CHD3-202ENST00000358181 FAM104BQ5XKR9 115 aa7.89□□□□□ -1.15
CHD3-202ENST00000358181 CD177Q8N6Q3 437 aa7.89□□□□□ -1.15
CHD3-202ENST00000358181 MRPS18AQ9NVS2 196 aaKnown RBP7.89□□□□□ -1.15
CHD3-202ENST00000358181 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.89□□□□□ -1.15
CHD3-202ENST00000358181 ETV2O00321 342 aaPredicted RBP7.89□□□□□ -1.15
CHD3-202ENST00000358181 GP9P14770 177 aa7.89□□□□□ -1.15
CHD3-202ENST00000358181 C5orf64Q2M2E5 130 aa7.89□□□□□ -1.15
CHD3-202ENST00000358181 WIPF2Q8TF74 440 aaPredicted RBP7.89□□□□□ -1.15
CHD3-202ENST00000358181 CCL24O00175 119 aa7.88□□□□□ -1.15
CHD3-202ENST00000358181 GYPEP15421 78 aa7.88□□□□□ -1.15
CHD3-202ENST00000358181 CRYBA4P53673 196 aa7.88□□□□□ -1.15
CHD3-202ENST00000358181 ZC2HC1AQ96GY0 325 aa7.88□□□□□ -1.15
CHD3-202ENST00000358181 TRAV3A0A0B4J244 114 aa7.88□□□□□ -1.15
CHD3-202ENST00000358181 FAM90A1Q86YD7 464 aa7.88□□□□□ -1.15
CHD3-202ENST00000358181 TRPM7Q96QT4 1865 aa7.88□□□□□ -1.15
CHD3-202ENST00000358181 DOCK4Q8N1I0 1966 aa7.88□□□□□ -1.15
CHD3-202ENST00000358181 CACNA1EQ15878 2313 aa7.88□□□□□ -1.15
CHD3-202ENST00000358181 TRAV4A0A0B4J268 109 aa7.88□□□□□ -1.15
CHD3-202ENST00000358181 IGKV1D-13A0A0B4J2D9 117 aa7.88□□□□□ -1.15
CHD3-202ENST00000358181 IGKV1-13P0DP09 117 aa7.88□□□□□ -1.15
CHD3-202ENST00000358181 CCL20P78556 96 aa7.88□□□□□ -1.15
CHD3-202ENST00000358181 ZNF497Q6ZNH5 498 aa7.88□□□□□ -1.15
CHD3-202ENST00000358181 TSKUQ8WUA8 353 aa7.88□□□□□ -1.15
CHD3-202ENST00000358181 ZNRD1Q9P1U0 126 aa7.88□□□□□ -1.15
CHD3-202ENST00000358181 FAM186AA6NE01 2351 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 270.3 ms