RNA–Protein interactions for RNA: ENST00000357980.8

TPM1-205, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-205ENST00000357980 GOLT1AQ6ZVE7 132 aa12.92□□□□□ -0.34
TPM1-205ENST00000357980 DLX4Q92988 240 aaPredicted RBP12.92□□□□□ -0.34
TPM1-205ENST00000357980 FMC1Q96HJ9 113 aa12.92□□□□□ -0.34
TPM1-205ENST00000357980 K7EN84 100 aa12.91□□□□□ -0.34
TPM1-205ENST00000357980 DNASE2O00115 360 aaPredicted RBP12.91□□□□□ -0.34
TPM1-205ENST00000357980 CCL24O00175 119 aa12.91□□□□□ -0.34
TPM1-205ENST00000357980 SOCS3O14543 225 aa12.91□□□□□ -0.34
TPM1-205ENST00000357980 TSPAN4O14817 238 aa12.91□□□□□ -0.34
TPM1-205ENST00000357980 TMEM88Q6PEY1 159 aa12.91□□□□□ -0.34
TPM1-205ENST00000357980 CBLN2Q8IUK8 224 aa12.91□□□□□ -0.34
TPM1-205ENST00000357980 ISOC2Q96AB3 205 aa12.91□□□□□ -0.34
TPM1-205ENST00000357980 NRN1Q9NPD7 142 aa12.91□□□□□ -0.34
TPM1-205ENST00000357980 MAST4O15021 2626 aa12.91□□□□□ -0.34
TPM1-205ENST00000357980 JMJD1CQ15652 2540 aa12.91□□□□□ -0.34
TPM1-205ENST00000357980 S100A9P06702 114 aaKnown RBP12.9□□□□□ -0.34
TPM1-205ENST00000357980 FOLR2P14207 255 aa12.9□□□□□ -0.34
TPM1-205ENST00000357980 TCF24Q7RTU0 167 aa12.9□□□□□ -0.34
TPM1-205ENST00000357980 RNF182Q8N6D2 247 aa12.9□□□□□ -0.34
TPM1-205ENST00000357980 OR9G4Q8NGQ1 327 aa12.9□□□□□ -0.34
TPM1-205ENST00000357980 TRAV8-1A0A0A6YYK1 113 aa12.9□□□□□ -0.34
TPM1-205ENST00000357980 CSN1S1P47710 185 aa12.9□□□□□ -0.34
TPM1-205ENST00000357980 UBE2G1P62253 170 aa12.9□□□□□ -0.34
TPM1-205ENST00000357980 RNF212Q495C1 297 aa12.9□□□□□ -0.34
TPM1-205ENST00000357980 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.9□□□□□ -0.34
TPM1-205ENST00000357980 TMEM75Q8N9X5 138 aa12.9□□□□□ -0.34
TPM1-205ENST00000357980 SGK494Q96LW2 274 aa12.9□□□□□ -0.34
TPM1-205ENST00000357980 PRELID1Q9Y255 219 aa12.9□□□□□ -0.34
TPM1-205ENST00000357980 TRBV6-1A0A0K0K1D8 114 aa12.89□□□□□ -0.35
TPM1-205ENST00000357980 SERTM2A0A1B0GWG4 89 aa12.89□□□□□ -0.35
TPM1-205ENST00000357980 LTAP01374 205 aa12.89□□□□□ -0.35
TPM1-205ENST00000357980 PRB4P10163 310 aaPredicted RBP12.89□□□□□ -0.35
TPM1-205ENST00000357980 LCN12Q6JVE5 192 aa12.89□□□□□ -0.35
TPM1-205ENST00000357980 MRPL53Q96EL3 112 aaKnown RBP12.89□□□□□ -0.35
TPM1-205ENST00000357980 PEMTQ9UBM1 199 aa12.89□□□□□ -0.35
TPM1-205ENST00000357980 MLXQ9UH92 298 aa12.89□□□□□ -0.35
TPM1-205ENST00000357980 SELENOKQ9Y6D0 94 aa12.89□□□□□ -0.35
TPM1-205ENST00000357980 ZNF705FA8MVS1 300 aaPredicted RBP12.88□□□□□ -0.35
TPM1-205ENST00000357980 RPL11P62913 178 aaKnown RBP12.88□□□□□ -0.35
TPM1-205ENST00000357980 Q86TA4 180 aa12.88□□□□□ -0.35
TPM1-205ENST00000357980 BAGE2Q86Y30 109 aa12.88□□□□□ -0.35
TPM1-205ENST00000357980 C16orf92Q96LL3 132 aa12.88□□□□□ -0.35
TPM1-205ENST00000357980 K7EQM0 130 aa12.88□□□□□ -0.35
TPM1-205ENST00000357980 PSG3Q16557 428 aa12.88□□□□□ -0.35
TPM1-205ENST00000357980 SMIM12Q96EX1 92 aa12.88□□□□□ -0.35
TPM1-205ENST00000357980 MLST8Q9BVC4 326 aa12.88□□□□□ -0.35
TPM1-205ENST00000357980 SMCO4Q9NRQ5 59 aa12.88□□□□□ -0.35
TPM1-205ENST00000357980 TMEM242Q9NWH2 141 aa12.88□□□□□ -0.35
TPM1-205ENST00000357980 CLEC5AQ9NY25 188 aa12.88□□□□□ -0.35
TPM1-205ENST00000357980 IGKV2-40A0A087WW87 121 aaPredicted RBP12.87□□□□□ -0.35
TPM1-205ENST00000357980 IGKV2D-40P01614 121 aaPredicted RBP12.87□□□□□ -0.35
TPM1-205ENST00000357980 CSN3P07498 182 aa12.87□□□□□ -0.35
TPM1-205ENST00000357980 NDUFA11Q86Y39 141 aa12.87□□□□□ -0.35
TPM1-205ENST00000357980 NHLRC2Q8NBF2 726 aa12.87□□□□□ -0.35
TPM1-205ENST00000357980 DCANP1Q8TF63 244 aa12.87□□□□□ -0.35
TPM1-205ENST00000357980 C20orf173Q96LM9 149 aa12.87□□□□□ -0.35
TPM1-205ENST00000357980 TENM1Q9UKZ4 2725 aa12.87□□□□□ -0.35
TPM1-205ENST00000357980 WNK1Q9H4A3 2382 aa12.86□□□□□ -0.35
TPM1-205ENST00000357980 IGKV3-7A0A075B6H7 116 aa12.86□□□□□ -0.35
TPM1-205ENST00000357980 PRAC2D3DTV9 90 aa12.86□□□□□ -0.35
TPM1-205ENST00000357980 GCGP01275 180 aa12.86□□□□□ -0.35
TPM1-205ENST00000357980 MT-ND4LP03901 98 aa12.86□□□□□ -0.35
TPM1-205ENST00000357980 FLI1Q01543 452 aaPredicted RBP12.86□□□□□ -0.35
TPM1-205ENST00000357980 FOXL1Q12952 345 aa12.86□□□□□ -0.35
TPM1-205ENST00000357980 OR5I1Q13606 314 aa12.86□□□□□ -0.35
TPM1-205ENST00000357980 SFRP2Q96HF1 295 aa12.86□□□□□ -0.35
TPM1-205ENST00000357980 CTDSP1Q9GZU7 261 aa12.86□□□□□ -0.35
TPM1-205ENST00000357980 M0QZ24 198 aa12.85□□□□□ -0.35
TPM1-205ENST00000357980 MS4A6AQ9H2W1 248 aa12.85□□□□□ -0.35
TPM1-205ENST00000357980 TUBA4BQ9H853 241 aa12.85□□□□□ -0.35
TPM1-205ENST00000357980 NSUN5P1Q3KNT7 163 aa12.85□□□□□ -0.35
TPM1-205ENST00000357980 SAMD13Q5VXD3 122 aa12.85□□□□□ -0.35
TPM1-205ENST00000357980 PRNTQ86SH4 94 aa12.85□□□□□ -0.35
TPM1-205ENST00000357980 VGLL1Q99990 258 aa12.85□□□□□ -0.35
TPM1-205ENST00000357980 PSG8Q9UQ74 426 aa12.85□□□□□ -0.35
TPM1-205ENST00000357980 RBAKDNA6NC62 111 aa12.84□□□□□ -0.35
TPM1-205ENST00000357980 MGST1P10620 155 aaKnown RBP12.84□□□□□ -0.35
TPM1-205ENST00000357980 TMEM183AQ8IXX5 376 aa12.84□□□□□ -0.35
TPM1-205ENST00000357980 GBGT1Q8N5D6 347 aa12.84□□□□□ -0.35
TPM1-205ENST00000357980 ANAPC16Q96DE5 110 aa12.84□□□□□ -0.35
TPM1-205ENST00000357980 CXorf65A6NEN9 183 aa12.83□□□□□ -0.35
TPM1-205ENST00000357980 FBLL1A6NHQ2 334 aaKnown RBP12.83□□□□□ -0.35
TPM1-205ENST00000357980 ZFP30Q9Y2G7 519 aa12.83□□□□□ -0.35
TPM1-205ENST00000357980 H7BYZ3 331 aa12.83□□□□□ -0.36
TPM1-205ENST00000357980 YPEL4Q96NS1 127 aa12.83□□□□□ -0.36
TPM1-205ENST00000357980 K7EQG2 157 aa12.82□□□□□ -0.36
TPM1-205ENST00000357980 OVOL1O14753 267 aa12.82□□□□□ -0.36
TPM1-205ENST00000357980 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.82□□□□□ -0.36
TPM1-205ENST00000357980 ZNF738Q8NE65 137 aa12.82□□□□□ -0.36
TPM1-205ENST00000357980 ASCL2Q99929 193 aa12.82□□□□□ -0.36
TPM1-205ENST00000357980 RNASE7Q9H1E1 156 aaKnown RBP12.82□□□□□ -0.36
TPM1-205ENST00000357980 ATRQ13535 2644 aa12.82□□□□□ -0.36
TPM1-205ENST00000357980 PPP1R2P9O14990 202 aa12.81□□□□□ -0.36
TPM1-205ENST00000357980 ERVFC1-1P60608 527 aa12.81□□□□□ -0.36
TPM1-205ENST00000357980 OR10G8Q8NGN5 311 aa12.81□□□□□ -0.36
TPM1-205ENST00000357980 OSTCQ9NRP0 149 aa12.81□□□□□ -0.36
TPM1-205ENST00000357980 SIGLEC8Q9NYZ4 499 aa12.81□□□□□ -0.36
TPM1-205ENST00000357980 ERCC8Q13216 396 aa12.81□□□□□ -0.36
TPM1-205ENST00000357980 DEFB114Q30KQ6 69 aa12.81□□□□□ -0.36
TPM1-205ENST00000357980 C9orf47Q6ZRZ4 202 aa12.81□□□□□ -0.36
TPM1-205ENST00000357980 FAM231DQ6ZW35 169 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms