RNA–Protein interactions for RNA: ENST00000356396.8

LSS-201, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 2,995 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-201ENST00000356396 GDF5OSQ5U4N7 250 aa10.64□□□□□ -0.71
LSS-201ENST00000356396 STXBP6Q8NFX7 210 aa10.64□□□□□ -0.71
LSS-201ENST00000356396 NEU1Q99519 415 aa10.64□□□□□ -0.71
LSS-201ENST00000356396 TRBV9A0A0B4J1U6 114 aa10.64□□□□□ -0.71
LSS-201ENST00000356396 XKRY2A2RUG3 117 aa10.64□□□□□ -0.71
LSS-201ENST00000356396 ZNF138P52744 262 aa10.64□□□□□ -0.71
LSS-201ENST00000356396 SYNJ2BPP57105 145 aa10.64□□□□□ -0.71
LSS-201ENST00000356396 C11orf52Q96A22 123 aa10.64□□□□□ -0.71
LSS-201ENST00000356396 RNF2Q99496 336 aa10.64□□□□□ -0.71
LSS-201ENST00000356396 IGHG2P01859 326 aa10.63□□□□□ -0.71
LSS-201ENST00000356396 FXYD7P58549 80 aa10.63□□□□□ -0.71
LSS-201ENST00000356396 EEF1AKMT3Q96AZ1 226 aa10.63□□□□□ -0.71
LSS-201ENST00000356396 NAT8BQ9UHF3 227 aa10.63□□□□□ -0.71
LSS-201ENST00000356396 POLR3KQ9Y2Y1 108 aaPredicted RBP10.63□□□□□ -0.71
LSS-201ENST00000356396 BMPR1BO00238 502 aa10.63□□□□□ -0.71
LSS-201ENST00000356396 BUB3O43684 328 aa10.63□□□□□ -0.71
LSS-201ENST00000356396 PMCHL1Q16048 86 aa10.63□□□□□ -0.71
LSS-201ENST00000356396 GTSF1Q8WW33 167 aa10.63□□□□□ -0.71
LSS-201ENST00000356396 SRD5A3Q9H8P0 318 aa10.63□□□□□ -0.71
LSS-201ENST00000356396 COL6A5A8TX70 2615 aa10.62□□□□□ -0.71
LSS-201ENST00000356396 B4DEV8 164 aa10.62□□□□□ -0.71
LSS-201ENST00000356396 CHEK1O14757 476 aa10.62□□□□□ -0.71
LSS-201ENST00000356396 C5orf17Q8NAS9 161 aa10.62□□□□□ -0.71
LSS-201ENST00000356396 C20orf173Q96LM9 149 aa10.62□□□□□ -0.71
LSS-201ENST00000356396 ATG101Q9BSB4 218 aa10.62□□□□□ -0.71
LSS-201ENST00000356396 NOTCH1P46531 2555 aa10.62□□□□□ -0.71
LSS-201ENST00000356396 GATCO43716 136 aaKnown RBP10.62□□□□□ -0.71
LSS-201ENST00000356396 SLAQ13239 276 aa10.62□□□□□ -0.71
LSS-201ENST00000356396 RPEL1Q2QD12 228 aa10.62□□□□□ -0.71
LSS-201ENST00000356396 AP4M1O00189 453 aa10.62□□□□□ -0.71
LSS-201ENST00000356396 SLURP1P55000 103 aa10.62□□□□□ -0.71
LSS-201ENST00000356396 S100A12P80511 92 aa10.62□□□□□ -0.71
LSS-201ENST00000356396 NUP35Q8NFH5 326 aa10.62□□□□□ -0.71
LSS-201ENST00000356396 C19orf24Q9BVV8 132 aa10.62□□□□□ -0.71
LSS-201ENST00000356396 NAGKQ9UJ70 344 aa10.62□□□□□ -0.71
LSS-201ENST00000356396 CDC42EP3Q9UKI2 254 aa10.62□□□□□ -0.71
LSS-201ENST00000356396 PSG8Q9UQ74 426 aa10.62□□□□□ -0.71
LSS-201ENST00000356396 LINC00587B1AMM8 73 aa10.61□□□□□ -0.71
LSS-201ENST00000356396 RELQ04864 619 aaPredicted RBP10.61□□□□□ -0.71
LSS-201ENST00000356396 PMS2P11Q13670 270 aa10.61□□□□□ -0.71
LSS-201ENST00000356396 FAM19A2Q8N3H0 131 aa10.61□□□□□ -0.71
LSS-201ENST00000356396 TMEM68Q96MH6 324 aa10.61□□□□□ -0.71
LSS-201ENST00000356396 MRPL18Q9H0U6 180 aaKnown RBP10.61□□□□□ -0.71
LSS-201ENST00000356396 GOSR1O95249 250 aa10.61□□□□□ -0.71
LSS-201ENST00000356396 YPEL3P61236 119 aaPredicted RBP10.61□□□□□ -0.71
LSS-201ENST00000356396 TMEM183BQ1AE95 376 aa10.61□□□□□ -0.71
LSS-201ENST00000356396 Q86TA4 180 aa10.61□□□□□ -0.71
LSS-201ENST00000356396 TMEM183AQ8IXX5 376 aa10.61□□□□□ -0.71
LSS-201ENST00000356396 RCHY1Q96PM5 261 aa10.61□□□□□ -0.71
LSS-201ENST00000356396 IL36BQ9NZH7 164 aa10.61□□□□□ -0.71
LSS-201ENST00000356396 PITPNC1Q9UKF7 332 aa10.61□□□□□ -0.71
LSS-201ENST00000356396 PHOX2AO14813 284 aa10.6□□□□□ -0.71
LSS-201ENST00000356396 CSN3P07498 182 aa10.6□□□□□ -0.71
LSS-201ENST00000356396 LOXL1Q08397 574 aaPredicted RBP10.6□□□□□ -0.71
LSS-201ENST00000356396 ANAPC16Q96DE5 110 aa10.6□□□□□ -0.71
LSS-201ENST00000356396 GPR82Q96P67 336 aa10.6□□□□□ -0.71
LSS-201ENST00000356396 TRBV24-1A0A075B6N3 115 aa10.6□□□□□ -0.71
LSS-201ENST00000356396 DIRC3C9JPN6 131 aa10.6□□□□□ -0.71
LSS-201ENST00000356396 GCGP01275 180 aa10.6□□□□□ -0.71
LSS-201ENST00000356396 PLP1P60201 277 aa10.6□□□□□ -0.71
LSS-201ENST00000356396 DMRTA1Q5VZB9 504 aa10.6□□□□□ -0.71
LSS-201ENST00000356396 LCN12Q6JVE5 192 aa10.6□□□□□ -0.71
LSS-201ENST00000356396 KCNIP4Q6PIL6 250 aa10.6□□□□□ -0.71
LSS-201ENST00000356396 MCRIP2Q9BUT9 160 aaKnown RBP10.6□□□□□ -0.71
LSS-201ENST00000356396 MSRB1Q9NZV6 116 aa10.6□□□□□ -0.71
LSS-201ENST00000356396 HTN1P15515 57 aa10.59□□□□□ -0.71
LSS-201ENST00000356396 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.59□□□□□ -0.71
LSS-201ENST00000356396 CTDSP1Q9GZU7 261 aa10.59□□□□□ -0.71
LSS-201ENST00000356396 AAMDCQ9H7C9 122 aa10.59□□□□□ -0.71
LSS-201ENST00000356396 IGHV4OR15-8A0A075B7B6 117 aa10.59□□□□□ -0.71
LSS-201ENST00000356396 A0A087WW49 117 aa10.59□□□□□ -0.71
LSS-201ENST00000356396 FOXE3Q13461 319 aa10.59□□□□□ -0.71
LSS-201ENST00000356396 CYB5R2Q6BCY4 276 aa10.59□□□□□ -0.71
LSS-201ENST00000356396 LINC00469Q8N7U9 141 aa10.59□□□□□ -0.71
LSS-201ENST00000356396 C16orf92Q96LL3 132 aa10.59□□□□□ -0.71
LSS-201ENST00000356396 P01737 135 aa10.59□□□□□ -0.71
LSS-201ENST00000356396 C8orf86Q6ZUL3 223 aa10.59□□□□□ -0.71
LSS-201ENST00000356396 DAZAP1Q96EP5 407 aaKnown RBP10.59□□□□□ -0.71
LSS-201ENST00000356396 RHPN1-AS1Q9BWJ2 59 aa10.59□□□□□ -0.71
LSS-201ENST00000356396 NIT2Q9NQR4 276 aa10.59□□□□□ -0.71
LSS-201ENST00000356396 ARMS2P0C7Q2 107 aa10.58□□□□□ -0.72
LSS-201ENST00000356396 ZNF688P0C7X2 276 aa10.58□□□□□ -0.72
LSS-201ENST00000356396 METTL26Q96S19 204 aa10.58□□□□□ -0.72
LSS-201ENST00000356396 VPREB3Q9UKI3 123 aa10.58□□□□□ -0.72
LSS-201ENST00000356396 RNF114Q9Y508 228 aa10.58□□□□□ -0.72
LSS-201ENST00000356396 NBEAL1Q6ZS30 2694 aa10.58□□□□□ -0.72
LSS-201ENST00000356396 TMEM213A2RRL7 107 aa10.58□□□□□ -0.72
LSS-201ENST00000356396 CXorf65A6NEN9 183 aa10.58□□□□□ -0.72
LSS-201ENST00000356396 C9JCJ5 164 aa10.58□□□□□ -0.72
LSS-201ENST00000356396 GAS8-AS1O95177 125 aa10.58□□□□□ -0.72
LSS-201ENST00000356396 FAM209BQ5JX69 171 aa10.58□□□□□ -0.72
LSS-201ENST00000356396 ZNF702PQ9H963 129 aa10.58□□□□□ -0.72
LSS-201ENST00000356396 TRAV8-2A0A0B4J237 113 aa10.57□□□□□ -0.72
LSS-201ENST00000356396 ORM1P02763 201 aa10.57□□□□□ -0.72
LSS-201ENST00000356396 FOLR2P14207 255 aa10.57□□□□□ -0.72
LSS-201ENST00000356396 SRIP30626 198 aa10.57□□□□□ -0.72
LSS-201ENST00000356396 LURAP1LQ8IV03 231 aa10.57□□□□□ -0.72
LSS-201ENST00000356396 OTORQ9NRC9 128 aa10.57□□□□□ -0.72
LSS-201ENST00000356396 TP53TG3Q9ULZ0 132 aa10.57□□□□□ -0.72
LSS-201ENST00000356396 TRAV30A0A087WSZ9 112 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms