RNA–Protein interactions for RNA: ENST00000356384.4

RXRA-201, Transcript of retinoid X receptor alpha, humanhuman

TSL 5

Gene RXRA, Length 5,770 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-201ENST00000356384 C2orf66Q6UXQ4 117 aa12.98□□□□□ -0.33
RXRA-201ENST00000356384 TRBV6-6A0A0A6YYG2 114 aa12.97□□□□□ -0.33
RXRA-201ENST00000356384 FAM231BA6NCW3 169 aa12.97□□□□□ -0.33
RXRA-201ENST00000356384 MRAPQ8TCY5 172 aa12.97□□□□□ -0.33
RXRA-201ENST00000356384 KLHDC3Q9BQ90 382 aa12.97□□□□□ -0.33
RXRA-201ENST00000356384 SCN5AQ14524 2016 aa12.97□□□□□ -0.33
RXRA-201ENST00000356384 INAFM2P0DMQ5 153 aa12.97□□□□□ -0.33
RXRA-201ENST00000356384 ZNRD1Q9P1U0 126 aa12.97□□□□□ -0.33
RXRA-201ENST00000356384 MMP23AO75900 390 aa12.96□□□□□ -0.33
RXRA-201ENST00000356384 Q6ZRM9 215 aa12.96□□□□□ -0.33
RXRA-201ENST00000356384 MAPK1IP1LQ8NDC0 245 aa12.96□□□□□ -0.33
RXRA-201ENST00000356384 ZSWIM8A7E2V4 1837 aa12.96□□□□□ -0.33
RXRA-201ENST00000356384 CACNA1BQ00975 2339 aa12.96□□□□□ -0.33
RXRA-201ENST00000356384 A0A1W2PPI3 338 aa12.96□□□□□ -0.33
RXRA-201ENST00000356384 PDE6HQ13956 83 aa12.96□□□□□ -0.34
RXRA-201ENST00000356384 IGHV3-38A0A0C4DH36 116 aa12.96□□□□□ -0.34
RXRA-201ENST00000356384 I3L3M4 83 aa12.96□□□□□ -0.34
RXRA-201ENST00000356384 EREGO14944 169 aa12.96□□□□□ -0.34
RXRA-201ENST00000356384 CGB3P0DN86 165 aa12.96□□□□□ -0.34
RXRA-201ENST00000356384 TMEM141Q96I45 108 aa12.96□□□□□ -0.34
RXRA-201ENST00000356384 UBL5Q9BZL1 73 aa12.96□□□□□ -0.34
RXRA-201ENST00000356384 ATP6V0E1O15342 81 aa12.95□□□□□ -0.34
RXRA-201ENST00000356384 RHODO00212 210 aa12.95□□□□□ -0.34
RXRA-201ENST00000356384 AZU1P20160 251 aa12.95□□□□□ -0.34
RXRA-201ENST00000356384 Q71RC1 249 aaPredicted RBP12.95□□□□□ -0.34
RXRA-201ENST00000356384 TMEM75Q8N9X5 138 aa12.95□□□□□ -0.34
RXRA-201ENST00000356384 KIF26BQ2KJY2 2108 aa12.95□□□□□ -0.34
RXRA-201ENST00000356384 A0A1B0GUS0 222 aa12.95□□□□□ -0.34
RXRA-201ENST00000356384 PFN1P07737 140 aaKnown RBP12.95□□□□□ -0.34
RXRA-201ENST00000356384 PRSS57Q6UWY2 283 aa12.95□□□□□ -0.34
RXRA-201ENST00000356384 THSD7BQ9C0I4 1608 aa12.95□□□□□ -0.34
RXRA-201ENST00000356384 GAGE6Q13070 117 aa12.94□□□□□ -0.34
RXRA-201ENST00000356384 KLF5Q13887 457 aaPredicted RBP12.94□□□□□ -0.34
RXRA-201ENST00000356384 THAP8Q8NA92 274 aa12.94□□□□□ -0.34
RXRA-201ENST00000356384 NCOR1O75376 2440 aa12.94□□□□□ -0.34
RXRA-201ENST00000356384 PDCD11Q14690 1871 aaKnown RBP12.94□□□□□ -0.34
RXRA-201ENST00000356384 PATJQ8NI35 1801 aa12.94□□□□□ -0.34
RXRA-201ENST00000356384 RNF223E7ERA6 249 aa12.94□□□□□ -0.34
RXRA-201ENST00000356384 GAGE7O76087 117 aa12.94□□□□□ -0.34
RXRA-201ENST00000356384 GAGE12FP0CL80 117 aa12.94□□□□□ -0.34
RXRA-201ENST00000356384 GAGE12GP0CL81 117 aa12.94□□□□□ -0.34
RXRA-201ENST00000356384 GAGE12IP0CL82 117 aa12.94□□□□□ -0.34
RXRA-201ENST00000356384 HS3ST6Q96QI5 342 aa12.94□□□□□ -0.34
RXRA-201ENST00000356384 SCRT2Q9NQ03 307 aa12.94□□□□□ -0.34
RXRA-201ENST00000356384 POLR3KQ9Y2Y1 108 aaPredicted RBP12.94□□□□□ -0.34
RXRA-201ENST00000356384 TRAV26-2A0A0B4J265 109 aa12.94□□□□□ -0.34
RXRA-201ENST00000356384 SIP14410 1827 aa12.94□□□□□ -0.34
RXRA-201ENST00000356384 CRLF1O75462 422 aa12.94□□□□□ -0.34
RXRA-201ENST00000356384 MRPL52Q86TS9 123 aaKnown RBP12.94□□□□□ -0.34
RXRA-201ENST00000356384 TRAV12-1A0A0B4J245 112 aa12.93□□□□□ -0.34
RXRA-201ENST00000356384 CGB7P0DN87 165 aa12.93□□□□□ -0.34
RXRA-201ENST00000356384 PRSS46E5RG02 174 aa12.93□□□□□ -0.34
RXRA-201ENST00000356384 PAX9P55771 341 aa12.93□□□□□ -0.34
RXRA-201ENST00000356384 QRFPP83859 136 aa12.93□□□□□ -0.34
RXRA-201ENST00000356384 TCTEX1D4Q5JR98 221 aa12.93□□□□□ -0.34
RXRA-201ENST00000356384 HAPLN4Q86UW8 402 aa12.93□□□□□ -0.34
RXRA-201ENST00000356384 Q8N8P6 123 aa12.93□□□□□ -0.34
RXRA-201ENST00000356384 ZNRF2Q8NHG8 242 aa12.93□□□□□ -0.34
RXRA-201ENST00000356384 MPDZO75970 2070 aa12.93□□□□□ -0.34
RXRA-201ENST00000356384 FNDC10F2Z333 226 aa12.93□□□□□ -0.34
RXRA-201ENST00000356384 LINC01619G3V211 115 aa12.93□□□□□ -0.34
RXRA-201ENST00000356384 SRSF8Q9BRL6 282 aaKnown RBP12.93□□□□□ -0.34
RXRA-201ENST00000356384 IGHG3P01860 377 aa12.93□□□□□ -0.34
RXRA-201ENST00000356384 MBD3L4A6NDZ8 208 aaPredicted RBP12.92□□□□□ -0.34
RXRA-201ENST00000356384 MBD3L3A6NE82 208 aaPredicted RBP12.92□□□□□ -0.34
RXRA-201ENST00000356384 MBD3L5A6NJ08 208 aaPredicted RBP12.92□□□□□ -0.34
RXRA-201ENST00000356384 NDUFB8O95169 186 aa12.92□□□□□ -0.34
RXRA-201ENST00000356384 FAM104BQ5XKR9 115 aa12.92□□□□□ -0.34
RXRA-201ENST00000356384 MDS2Q8NDY4 140 aa12.92□□□□□ -0.34
RXRA-201ENST00000356384 MBD3L2Q8NHZ7 208 aaPredicted RBP12.92□□□□□ -0.34
RXRA-201ENST00000356384 C18orf32Q8TCD1 76 aa12.92□□□□□ -0.34
RXRA-201ENST00000356384 DOCK4Q8N1I0 1966 aa12.92□□□□□ -0.34
RXRA-201ENST00000356384 CT83Q5H943 113 aa12.92□□□□□ -0.34
RXRA-201ENST00000356384 CLPSP04118 112 aa12.92□□□□□ -0.34
RXRA-201ENST00000356384 Q0VG73 95 aa12.92□□□□□ -0.34
RXRA-201ENST00000356384 DOCK10Q96BY6 2186 aa12.92□□□□□ -0.34
RXRA-201ENST00000356384 GATA4P43694 442 aa12.92□□□□□ -0.34
RXRA-201ENST00000356384 FAM110DQ8TAY7 271 aaPredicted RBP12.92□□□□□ -0.34
RXRA-201ENST00000356384 ZNF492Q9P255 531 aa12.92□□□□□ -0.34
RXRA-201ENST00000356384 TRAV12-2A0A075B6T6 113 aa12.91□□□□□ -0.34
RXRA-201ENST00000356384 SDHAF1A6NFY7 115 aa12.91□□□□□ -0.34
RXRA-201ENST00000356384 E7EQL1 145 aa12.91□□□□□ -0.34
RXRA-201ENST00000356384 ADCYAP1P18509 176 aa12.91□□□□□ -0.34
RXRA-201ENST00000356384 ANK1P16157 1881 aa12.91□□□□□ -0.34
RXRA-201ENST00000356384 ACACAQ13085 2346 aa12.91□□□□□ -0.34
RXRA-201ENST00000356384 FGF6P10767 208 aa12.91□□□□□ -0.34
RXRA-201ENST00000356384 SLAQ13239 276 aa12.91□□□□□ -0.34
RXRA-201ENST00000356384 TMEM243Q9BU79 118 aa12.91□□□□□ -0.34
RXRA-201ENST00000356384 ARFGEF3Q5TH69 2177 aa12.91□□□□□ -0.34
RXRA-201ENST00000356384 TRBV20-1A0A075B6N2 111 aa12.91□□□□□ -0.34
RXRA-201ENST00000356384 TSSC4Q9Y5U2 329 aaPredicted RBP12.91□□□□□ -0.34
RXRA-201ENST00000356384 RIF1Q5UIP0 2472 aaKnown RBP12.91□□□□□ -0.34
RXRA-201ENST00000356384 CADP27708 2225 aa12.91□□□□□ -0.34
RXRA-201ENST00000356384 CITED1Q99966 193 aa12.91□□□□□ -0.34
RXRA-201ENST00000356384 IGHV1OR15-1A0A075B7D0 117 aa12.9□□□□□ -0.34
RXRA-201ENST00000356384 G3V318 75 aa12.9□□□□□ -0.34
RXRA-201ENST00000356384 TAL2Q16559 108 aa12.9□□□□□ -0.34
RXRA-201ENST00000356384 MSMBP08118 114 aa12.9□□□□□ -0.34
RXRA-201ENST00000356384 HLA-DRB4P13762 266 aa12.9□□□□□ -0.34
RXRA-201ENST00000356384 HLA-DRB4X5D2U9 266 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms