RNA–Protein interactions for RNA: ENST00000354828.7

GABPA-201, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 5,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-201ENST00000354828 RPP25LQ8N5L8 163 aaKnown RBP7.7□□□□□ -1.18
GABPA-201ENST00000354828 C12orf57Q99622 126 aa7.7□□□□□ -1.18
GABPA-201ENST00000354828 AGMATQ9BSE5 352 aa7.7□□□□□ -1.18
GABPA-201ENST00000354828 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.7□□□□□ -1.18
GABPA-201ENST00000354828 COX6CP09669 75 aa7.7□□□□□ -1.18
GABPA-201ENST00000354828 TMEM190Q8WZ59 177 aa7.7□□□□□ -1.18
GABPA-201ENST00000354828 ZNF414Q96IQ9 312 aa7.7□□□□□ -1.18
GABPA-201ENST00000354828 EREGO14944 169 aa7.7□□□□□ -1.18
GABPA-201ENST00000354828 OCC1Q8TAD7 63 aa7.7□□□□□ -1.18
GABPA-201ENST00000354828 FOXC2Q99958 501 aa7.7□□□□□ -1.18
GABPA-201ENST00000354828 ZNF106Q9H2Y7 1883 aaKnown RBP7.7□□□□□ -1.18
GABPA-201ENST00000354828 MRPS16Q9Y3D3 137 aaKnown RBP7.7□□□□□ -1.18
GABPA-201ENST00000354828 LY6G6DO95868 133 aa7.69□□□□□ -1.18
GABPA-201ENST00000354828 HOXA5P20719 270 aa7.69□□□□□ -1.18
GABPA-201ENST00000354828 MSMPQ1L6U9 139 aa7.69□□□□□ -1.18
GABPA-201ENST00000354828 OR11H2Q8NH07 326 aa7.69□□□□□ -1.18
GABPA-201ENST00000354828 IMMP2LQ96T52 175 aa7.69□□□□□ -1.18
GABPA-201ENST00000354828 SSBP4Q9BWG4 385 aaPredicted RBP7.69□□□□□ -1.18
GABPA-201ENST00000354828 CYSLTR1Q9Y271 337 aa7.69□□□□□ -1.18
GABPA-201ENST00000354828 TRAV12-2A0A075B6T6 113 aa7.69□□□□□ -1.18
GABPA-201ENST00000354828 TMEM238LA0A1B0GVL6 79 aa7.69□□□□□ -1.18
GABPA-201ENST00000354828 A6NJY4 79 aa7.69□□□□□ -1.18
GABPA-201ENST00000354828 FNDC10F2Z333 226 aa7.69□□□□□ -1.18
GABPA-201ENST00000354828 SH2D1AO60880 128 aa7.69□□□□□ -1.18
GABPA-201ENST00000354828 PDE6HQ13956 83 aa7.69□□□□□ -1.18
GABPA-201ENST00000354828 A0A087WWL8 130 aa7.69□□□□□ -1.18
GABPA-201ENST00000354828 RPL23P62829 140 aaKnown RBP7.69□□□□□ -1.18
GABPA-201ENST00000354828 PIFOQ8TCI5 191 aa7.69□□□□□ -1.18
GABPA-201ENST00000354828 PHLDA1Q8WV24 401 aaPredicted RBP7.69□□□□□ -1.18
GABPA-201ENST00000354828 HIST1H4GQ99525 98 aa7.69□□□□□ -1.18
GABPA-201ENST00000354828 CITED2Q99967 270 aaPredicted RBP7.69□□□□□ -1.18
GABPA-201ENST00000354828 FGF23Q9GZV9 251 aaPredicted RBP7.69□□□□□ -1.18
GABPA-201ENST00000354828 OSTCQ9NRP0 149 aa7.69□□□□□ -1.18
GABPA-201ENST00000354828 SRSF1Q07955 248 aaKnown RBP eCLIP7.68□□□□□ -1.18
GABPA-201ENST00000354828 C14orf178Q8N769 122 aaPredicted RBP7.68□□□□□ -1.18
GABPA-201ENST00000354828 MBD3L1Q8WWY6 194 aa7.68□□□□□ -1.18
GABPA-201ENST00000354828 PCNTO95613 3336 aa7.68□□□□□ -1.18
GABPA-201ENST00000354828 IGHV7-81A0A0B4J1V7 117 aa7.68□□□□□ -1.18
GABPA-201ENST00000354828 LMO4P61968 165 aa7.68□□□□□ -1.18
GABPA-201ENST00000354828 FAM90A2PQ658T7 463 aa7.68□□□□□ -1.18
GABPA-201ENST00000354828 OR5A1Q8NGJ0 315 aa7.68□□□□□ -1.18
GABPA-201ENST00000354828 SMPXQ9UHP9 88 aa7.68□□□□□ -1.18
GABPA-201ENST00000354828 WNK1Q9H4A3 2382 aa7.68□□□□□ -1.18
GABPA-201ENST00000354828 PPBPP02775 128 aa7.68□□□□□ -1.18
GABPA-201ENST00000354828 AZU1P20160 251 aa7.68□□□□□ -1.18
GABPA-201ENST00000354828 CDKN1BP46527 198 aa7.68□□□□□ -1.18
GABPA-201ENST00000354828 Q8N7P7 452 aa7.68□□□□□ -1.18
GABPA-201ENST00000354828 NUDT10Q8NFP7 164 aa7.68□□□□□ -1.18
GABPA-201ENST00000354828 NUDT11Q96G61 164 aa7.68□□□□□ -1.18
GABPA-201ENST00000354828 MYCNOSP40205 109 aa7.68□□□□□ -1.18
GABPA-201ENST00000354828 TMEM86BQ8N661 226 aa7.68□□□□□ -1.18
GABPA-201ENST00000354828 C11orf68Q9H3H3 251 aaKnown RBP7.68□□□□□ -1.18
GABPA-201ENST00000354828 DSCAMO60469 2012 aa7.68□□□□□ -1.18
GABPA-201ENST00000354828 IGHV3-16A0A0C4DH30 117 aa7.67□□□□□ -1.18
GABPA-201ENST00000354828 C22orf34Q6ZV56 151 aa7.67□□□□□ -1.18
GABPA-201ENST00000354828 ZNF462Q96JM2 2506 aa7.67□□□□□ -1.18
GABPA-201ENST00000354828 PRRC2AP48634 2157 aaKnown RBP7.67□□□□□ -1.18
GABPA-201ENST00000354828 GAGE12JA6NER3 117 aa7.67□□□□□ -1.18
GABPA-201ENST00000354828 GAGE1Q13065 139 aa7.67□□□□□ -1.18
GABPA-201ENST00000354828 GAGE4Q13068 117 aa7.67□□□□□ -1.18
GABPA-201ENST00000354828 GAGE5Q13069 117 aa7.67□□□□□ -1.18
GABPA-201ENST00000354828 GAGE13Q4V321 117 aa7.67□□□□□ -1.18
GABPA-201ENST00000354828 HAPLN4Q86UW8 402 aa7.67□□□□□ -1.18
GABPA-201ENST00000354828 C1orf159Q96HA4 380 aa7.67□□□□□ -1.18
GABPA-201ENST00000354828 SIRPDQ9H106 197 aa7.67□□□□□ -1.18
GABPA-201ENST00000354828 A6NDN8 102 aa7.67□□□□□ -1.18
GABPA-201ENST00000354828 CFPP27918 469 aa7.67□□□□□ -1.18
GABPA-201ENST00000354828 LYZL1Q6UWQ5 148 aa7.67□□□□□ -1.18
GABPA-201ENST00000354828 FASNP49327 2511 aaKnown RBP7.67□□□□□ -1.18
GABPA-201ENST00000354828 CKS1BP61024 79 aa7.67□□□□□ -1.18
GABPA-201ENST00000354828 KRTAP27-1Q3LI81 207 aa7.67□□□□□ -1.18
GABPA-201ENST00000354828 TSKUQ8WUA8 353 aa7.67□□□□□ -1.18
GABPA-201ENST00000354828 JMJD1CQ15652 2540 aa7.67□□□□□ -1.18
GABPA-201ENST00000354828 FOSL1P15407 271 aa7.66□□□□□ -1.18
GABPA-201ENST00000354828 ORMDL2Q53FV1 153 aa7.66□□□□□ -1.18
GABPA-201ENST00000354828 C5orf56Q8N8D9 126 aa7.66□□□□□ -1.18
GABPA-201ENST00000354828 IGHV1OR15-1A0A075B7D0 117 aa7.66□□□□□ -1.18
GABPA-201ENST00000354828 SSBP2P81877 361 aaPredicted RBP7.66□□□□□ -1.18
GABPA-201ENST00000354828 GUSBP1Q15486 140 aa7.66□□□□□ -1.18
GABPA-201ENST00000354828 ZFYVE26Q68DK2 2539 aa7.66□□□□□ -1.18
GABPA-201ENST00000354828 DNLZQ5SXM8 178 aa7.66□□□□□ -1.18
GABPA-201ENST00000354828 AJUBAQ96IF1 538 aa7.66□□□□□ -1.18
GABPA-201ENST00000354828 SMAD5-AS1Q9Y6J3 95 aa7.66□□□□□ -1.18
GABPA-201ENST00000354828 PRR14LQ5THK1 2151 aa7.66□□□□□ -1.18
GABPA-201ENST00000354828 TRAV9-2A0A087WT02 112 aa7.66□□□□□ -1.18
GABPA-201ENST00000354828 LOC102724200A0A096LPH7 203 aaPredicted RBP7.66□□□□□ -1.18
GABPA-201ENST00000354828 NDUFA3O95167 84 aa7.66□□□□□ -1.18
GABPA-201ENST00000354828 ARMS2P0C7Q2 107 aa7.66□□□□□ -1.18
GABPA-201ENST00000354828 SPAG8Q99932 426 aaPredicted RBP7.66□□□□□ -1.18
GABPA-201ENST00000354828 IGKV1-39P01597 117 aa7.65□□□□□ -1.18
GABPA-201ENST00000354828 IGKV1D-39P04432 117 aa7.65□□□□□ -1.18
GABPA-201ENST00000354828 CGB3P0DN86 165 aa7.65□□□□□ -1.18
GABPA-201ENST00000354828 APRG1Q8IVJ8 170 aa7.65□□□□□ -1.18
GABPA-201ENST00000354828 Q8N9W7 124 aa7.65□□□□□ -1.18
GABPA-201ENST00000354828 NPBQ8NG41 125 aa7.65□□□□□ -1.18
GABPA-201ENST00000354828 NXT2Q9NPJ8 142 aaKnown RBP7.65□□□□□ -1.18
GABPA-201ENST00000354828 PMCHL1Q16048 86 aa7.65□□□□□ -1.18
GABPA-201ENST00000354828 DMRTA1Q5VZB9 504 aa7.65□□□□□ -1.18
GABPA-201ENST00000354828 LINC00469Q8N7U9 141 aa7.65□□□□□ -1.18
GABPA-201ENST00000354828 IGHV4OR15-8A0A075B7B6 117 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms