RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 GVINP1Q7Z2Y8 2422 aa19.16■□□□□ 0.66
CPNE1-202ENST00000352393 TTC9CQ8N5M4 171 aa19.16■□□□□ 0.66
CPNE1-202ENST00000352393 C21orf62Q9NYP8 219 aa19.16■□□□□ 0.66
CPNE1-202ENST00000352393 OR2T8A6NH00 312 aa19.15■□□□□ 0.66
CPNE1-202ENST00000352393 M0R1W7 72 aa19.15■□□□□ 0.66
CPNE1-202ENST00000352393 CD5LO43866 347 aa19.15■□□□□ 0.66
CPNE1-202ENST00000352393 HES1Q14469 280 aa19.15■□□□□ 0.66
CPNE1-202ENST00000352393 ZNF562Q6V9R5 426 aa19.15■□□□□ 0.66
CPNE1-202ENST00000352393 RPL7P18124 248 aaKnown RBP19.15■□□□□ 0.66
CPNE1-202ENST00000352393 GRNP28799 593 aaKnown RBP19.15■□□□□ 0.66
CPNE1-202ENST00000352393 FOXE3Q13461 319 aa19.15■□□□□ 0.66
CPNE1-202ENST00000352393 MRPL51Q4U2R6 128 aaKnown RBP19.15■□□□□ 0.66
CPNE1-202ENST00000352393 SAPCD1Q5SSQ6 148 aa19.15■□□□□ 0.66
CPNE1-202ENST00000352393 PRR25Q96S07 402 aa19.15■□□□□ 0.66
CPNE1-202ENST00000352393 ARHGAP32A7KAX9 2087 aa19.15■□□□□ 0.66
CPNE1-202ENST00000352393 TPRP12270 2363 aaKnown RBP19.14■□□□□ 0.65
CPNE1-202ENST00000352393 LOC389332A0A1B0GUA5 103 aa19.14■□□□□ 0.65
CPNE1-202ENST00000352393 LY6HO94772 140 aa19.14■□□□□ 0.65
CPNE1-202ENST00000352393 FGF6P10767 208 aa19.14■□□□□ 0.65
CPNE1-202ENST00000352393 PAX8Q06710 450 aa19.14■□□□□ 0.65
CPNE1-202ENST00000352393 OR8A1Q8NGG7 326 aa19.14■□□□□ 0.65
CPNE1-202ENST00000352393 FBLL1A6NHQ2 334 aaKnown RBP19.13■□□□□ 0.65
CPNE1-202ENST00000352393 RPS20P60866 119 aaKnown RBP19.13■□□□□ 0.65
CPNE1-202ENST00000352393 FBXL19-AS1Q494R0 122 aa19.13■□□□□ 0.65
CPNE1-202ENST00000352393 FAM90A27PA6NNH2 459 aa19.13■□□□□ 0.65
CPNE1-202ENST00000352393 PRTN3P24158 256 aa19.13■□□□□ 0.65
CPNE1-202ENST00000352393 LGALS9BQ3B8N2 356 aa19.13■□□□□ 0.65
CPNE1-202ENST00000352393 LGALS9CQ6DKI2 356 aa19.13■□□□□ 0.65
CPNE1-202ENST00000352393 EGR2P11161 476 aaPredicted RBP19.12■□□□□ 0.65
CPNE1-202ENST00000352393 ANKRD39Q53RE8 183 aa19.12■□□□□ 0.65
CPNE1-202ENST00000352393 COL25A1Q9BXS0 654 aaPredicted RBP19.12■□□□□ 0.65
CPNE1-202ENST00000352393 Q8N6K4 173 aa19.12■□□□□ 0.65
CPNE1-202ENST00000352393 MUC6Q6W4X9 2439 aa19.11■□□□□ 0.65
CPNE1-202ENST00000352393 CBY3A6NI87 242 aa19.11■□□□□ 0.65
CPNE1-202ENST00000352393 A0A1W2PRD5 423 aa19.1■□□□□ 0.65
CPNE1-202ENST00000352393 A0A1W2PRF3 423 aa19.1■□□□□ 0.65
CPNE1-202ENST00000352393 A0A1W2PRM7 423 aa19.1■□□□□ 0.65
CPNE1-202ENST00000352393 IGLC6P0CF74 106 aa19.1■□□□□ 0.65
CPNE1-202ENST00000352393 PCP4P48539 62 aa19.1■□□□□ 0.65
CPNE1-202ENST00000352393 ZNF80P51504 273 aaPredicted RBP19.1■□□□□ 0.65
CPNE1-202ENST00000352393 Q8TAT8 98 aa19.1■□□□□ 0.65
CPNE1-202ENST00000352393 SMAD5-AS1Q9Y6J3 95 aa19.1■□□□□ 0.65
CPNE1-202ENST00000352393 ANKHD1Q8IWZ3 2542 aaKnown RBP19.1■□□□□ 0.65
CPNE1-202ENST00000352393 IGHV3-23P01764 117 aa19.1■□□□□ 0.65
CPNE1-202ENST00000352393 IGHG4P01861 327 aa19.1■□□□□ 0.65
CPNE1-202ENST00000352393 HBDP02042 147 aa19.1■□□□□ 0.65
CPNE1-202ENST00000352393 FER1L6-AS1Q8NA97 138 aa19.1■□□□□ 0.65
CPNE1-202ENST00000352393 TIMD4Q96H15 378 aa19.1■□□□□ 0.65
CPNE1-202ENST00000352393 DYNAPQ8N1N2 210 aa19.09■□□□□ 0.65
CPNE1-202ENST00000352393 OR1N2Q8NGR9 330 aa19.09■□□□□ 0.65
CPNE1-202ENST00000352393 PSMG3-AS1Q96PY0 264 aa19.09■□□□□ 0.65
CPNE1-202ENST00000352393 THYN1Q9P016 225 aa19.09■□□□□ 0.65
CPNE1-202ENST00000352393 NPYP01303 97 aa19.09■□□□□ 0.65
CPNE1-202ENST00000352393 CTSGP08311 255 aa19.09■□□□□ 0.65
CPNE1-202ENST00000352393 C21orf62-AS1Q17RA5 79 aa19.09■□□□□ 0.65
CPNE1-202ENST00000352393 ZNF575Q86XF7 245 aa19.09■□□□□ 0.65
CPNE1-202ENST00000352393 VGLL1Q99990 258 aa19.09■□□□□ 0.65
CPNE1-202ENST00000352393 TACC2O95359 2948 aa19.08■□□□□ 0.65
CPNE1-202ENST00000352393 CDKN1BP46527 198 aa19.08■□□□□ 0.64
CPNE1-202ENST00000352393 RABAC1Q9UI14 185 aa19.08■□□□□ 0.64
CPNE1-202ENST00000352393 SNAI2O43623 268 aa19.07■□□□□ 0.64
CPNE1-202ENST00000352393 BMI1P35226 326 aa19.07■□□□□ 0.64
CPNE1-202ENST00000352393 CACNG7P62955 275 aa19.07■□□□□ 0.64
CPNE1-202ENST00000352393 SRSF2Q01130 221 aaKnown RBP19.07■□□□□ 0.64
CPNE1-202ENST00000352393 NHLH1Q02575 133 aa19.07■□□□□ 0.64
CPNE1-202ENST00000352393 TMEM97Q5BJF2 176 aa19.07■□□□□ 0.64
CPNE1-202ENST00000352393 AMMECR1LQ6DCA0 310 aa19.07■□□□□ 0.64
CPNE1-202ENST00000352393 CCDC144NLQ6NUI1 221 aa19.07■□□□□ 0.64
CPNE1-202ENST00000352393 NCBP2LA6PVI3 153 aaKnown RBP19.07■□□□□ 0.64
CPNE1-202ENST00000352393 SEC11AP67812 179 aa19.07■□□□□ 0.64
CPNE1-202ENST00000352393 SMKR1H3BMG3 65 aa19.06■□□□□ 0.64
CPNE1-202ENST00000352393 CKS2P33552 79 aa19.06■□□□□ 0.64
CPNE1-202ENST00000352393 EBI3Q14213 229 aa19.06■□□□□ 0.64
CPNE1-202ENST00000352393 TWIST1Q15672 202 aa19.06■□□□□ 0.64
CPNE1-202ENST00000352393 VMO1Q7Z5L0 202 aa19.06■□□□□ 0.64
CPNE1-202ENST00000352393 SCGB2A1O75556 95 aa19.06■□□□□ 0.64
CPNE1-202ENST00000352393 HLA-DMBP28068 263 aa19.06■□□□□ 0.64
CPNE1-202ENST00000352393 BOD1L2Q8IYS8 172 aa19.06■□□□□ 0.64
CPNE1-202ENST00000352393 NPFFR1Q9GZQ6 430 aa19.06■□□□□ 0.64
CPNE1-202ENST00000352393 OOSP1A8MZH6 123 aa19.05■□□□□ 0.64
CPNE1-202ENST00000352393 K7ENP7 123 aa19.05■□□□□ 0.64
CPNE1-202ENST00000352393 FXYD7P58549 80 aa19.05■□□□□ 0.64
CPNE1-202ENST00000352393 FOXC1Q12948 553 aa19.05■□□□□ 0.64
CPNE1-202ENST00000352393 PEF1Q9UBV8 284 aaKnown RBP19.05■□□□□ 0.64
CPNE1-202ENST00000352393 TRAV8-6A0A0B4J262 113 aa19.04■□□□□ 0.64
CPNE1-202ENST00000352393 IGFL4Q6B9Z1 124 aa19.04■□□□□ 0.64
CPNE1-202ENST00000352393 CNFNQ9BYD5 112 aa19.04■□□□□ 0.64
CPNE1-202ENST00000352393 IFI27L1Q96BM0 104 aa19.04■□□□□ 0.64
CPNE1-202ENST00000352393 DCHS2Q6V1P9 2916 aa19.04■□□□□ 0.64
CPNE1-202ENST00000352393 TLN1Q9Y490 2541 aaKnown RBP19.04■□□□□ 0.64
CPNE1-202ENST00000352393 C7orf71A4D174 169 aa19.03■□□□□ 0.64
CPNE1-202ENST00000352393 RNF185Q96GF1 192 aa19.03■□□□□ 0.64
CPNE1-202ENST00000352393 IGHV7-81A0A0B4J1V7 117 aa19.03■□□□□ 0.64
CPNE1-202ENST00000352393 C11orf71Q6IPW1 123 aa19.03■□□□□ 0.64
CPNE1-202ENST00000352393 SMAD7O15105 426 aaKnown RBP19.02■□□□□ 0.64
CPNE1-202ENST00000352393 C1orf122Q6ZSJ8 110 aa19.02■□□□□ 0.64
CPNE1-202ENST00000352393 ABCA4P78363 2273 aa19.02■□□□□ 0.64
CPNE1-202ENST00000352393 LINC01546A6NGU7 62 aa19.01■□□□□ 0.63
CPNE1-202ENST00000352393 TMEM11P17152 192 aa19.01■□□□□ 0.63
CPNE1-202ENST00000352393 MINOS1Q5TGZ0 78 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms